RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
LINC01541-202ENST00000568095 H0Y9P7 68 aa3.41□□□□□ -1.86
LINC01541-202ENST00000568095 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
LINC01541-202ENST00000568095 CNBPP62633 177 aaKnown RBP3.4□□□□□ -1.86
LINC01541-202ENST00000568095 LINC01558Q9Y6Z2 57 aa3.4□□□□□ -1.86
LINC01541-202ENST00000568095 LINC01556Q5JQF7 62 aa3.4□□□□□ -1.87
LINC01541-202ENST00000568095 REG3GQ6UW15 175 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 COA5Q86WW8 74 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 WFDC13Q8IUB5 93 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 DEFB131BA0A096LNP1 70 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 LINC00472Q9H8W2 130 aa3.39□□□□□ -1.87
LINC01541-202ENST00000568095 CASC2Q6XLA1 102 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 A8MWP4 228 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 DNAH10OSP0CZ25 163 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 HTN3P15516 51 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 MOBPQ13875 183 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 DEFB116Q30KQ4 102 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
LINC01541-202ENST00000568095 APLNQ9ULZ1 77 aa3.37□□□□□ -1.87
LINC01541-202ENST00000568095 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
LINC01541-202ENST00000568095 A0A087WSZ3 146 aa3.37□□□□□ -1.87
LINC01541-202ENST00000568095 SPRR1BP22528 89 aa3.37□□□□□ -1.87
LINC01541-202ENST00000568095 LINC00313P59037 77 aa3.37□□□□□ -1.87
LINC01541-202ENST00000568095 A0A0G2JQZ4 141 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 A6NED7 52 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 MMP24-AS1A0A0U1RRL7 71 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 Q6ZR54 194 aa3.36□□□□□ -1.87
LINC01541-202ENST00000568095 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
LINC01541-202ENST00000568095 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
LINC01541-202ENST00000568095 KRTAP1-5Q9BYS1 174 aa3.34□□□□□ -1.87
LINC01541-202ENST00000568095 TP53AIP1Q9HCN2 124 aa3.33□□□□□ -1.88
LINC01541-202ENST00000568095 H0Y9J4 135 aa3.33□□□□□ -1.88
LINC01541-202ENST00000568095 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
LINC01541-202ENST00000568095 A0A087X002 238 aa3.33□□□□□ -1.88
LINC01541-202ENST00000568095 SPINK7P58062 85 aa3.33□□□□□ -1.88
LINC01541-202ENST00000568095 RYR2Q92736 4967 aa3.32□□□□□ -1.88
LINC01541-202ENST00000568095 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
LINC01541-202ENST00000568095 HRES1P13985 223 aa3.32□□□□□ -1.88
LINC01541-202ENST00000568095 Q96NJ1 140 aa3.32□□□□□ -1.88
LINC01541-202ENST00000568095 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
LINC01541-202ENST00000568095 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
LINC01541-202ENST00000568095 TGP01266 2768 aa3.31□□□□□ -1.88
LINC01541-202ENST00000568095 IGKV2-24A0A0C4DH68 120 aa3.31□□□□□ -1.88
LINC01541-202ENST00000568095 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
LINC01541-202ENST00000568095 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
LINC01541-202ENST00000568095 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
LINC01541-202ENST00000568095 PRLHP81277 87 aa3.3□□□□□ -1.88
LINC01541-202ENST00000568095 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
LINC01541-202ENST00000568095 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
LINC01541-202ENST00000568095 LRP1BQ9NZR2 4599 aa3.28□□□□□ -1.88
LINC01541-202ENST00000568095 PCOTHQ58A44 107 aa3.28□□□□□ -1.88
LINC01541-202ENST00000568095 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
LINC01541-202ENST00000568095 KRTAP11-1Q8IUC1 163 aa3.28□□□□□ -1.88
LINC01541-202ENST00000568095 C8orf17Q9NRJ1 99 aa3.28□□□□□ -1.88
LINC01541-202ENST00000568095 A0A096LNI7 61 aa3.27□□□□□ -1.89
LINC01541-202ENST00000568095 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
LINC01541-202ENST00000568095 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
LINC01541-202ENST00000568095 KRTAP13-1Q8IUC0 172 aa3.27□□□□□ -1.89
LINC01541-202ENST00000568095 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
LINC01541-202ENST00000568095 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
LINC01541-202ENST00000568095 NBDYA0A0U1RRE5 68 aa3.26□□□□□ -1.89
LINC01541-202ENST00000568095 RTL8CO15255 209 aa3.26□□□□□ -1.89
LINC01541-202ENST00000568095 RYR3Q15413 4870 aa3.26□□□□□ -1.89
LINC01541-202ENST00000568095 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
LINC01541-202ENST00000568095 A0A1B0GVX0 72 aa3.25□□□□□ -1.89
LINC01541-202ENST00000568095 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
LINC01541-202ENST00000568095 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
LINC01541-202ENST00000568095 IGHV6-1A0A0B4J1U7 121 aa3.24□□□□□ -1.89
LINC01541-202ENST00000568095 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
LINC01541-202ENST00000568095 SPATA8Q6RVD6 105 aa3.24□□□□□ -1.89
LINC01541-202ENST00000568095 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
LINC01541-202ENST00000568095 MRPL34Q9BQ48 92 aaKnown RBP3.24□□□□□ -1.89
LINC01541-202ENST00000568095 DMAC1Q96GE9 116 aa3.22□□□□□ -1.89
LINC01541-202ENST00000568095 ACYP2P14621 99 aa3.21□□□□□ -1.9
LINC01541-202ENST00000568095 UBE2DNLQ8IWF7 75 aa3.21□□□□□ -1.9
LINC01541-202ENST00000568095 Q5W150 140 aa3.21□□□□□ -1.9
LINC01541-202ENST00000568095 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
LINC01541-202ENST00000568095 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
LINC01541-202ENST00000568095 A0A087WTM6 91 aa3.19□□□□□ -1.9
LINC01541-202ENST00000568095 RETNLBQ9BQ08 111 aa3.19□□□□□ -1.9
LINC01541-202ENST00000568095 HSPG2P98160 4391 aa3.19□□□□□ -1.9
LINC01541-202ENST00000568095 SRRM2Q9UQ35 2752 aaKnown RBP3.18□□□□□ -1.9
LINC01541-202ENST00000568095 C14orf177Q52M58 125 aa3.18□□□□□ -1.9
LINC01541-202ENST00000568095 PANO1I0J062 215 aa3.17□□□□□ -1.9
LINC01541-202ENST00000568095 SPACA4Q8TDM5 124 aa3.17□□□□□ -1.9
LINC01541-202ENST00000568095 A0A1B0GU69 56 aa3.16□□□□□ -1.9
LINC01541-202ENST00000568095 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
LINC01541-202ENST00000568095 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
LINC01541-202ENST00000568095 C1orf134Q5TEV5 83 aa3.15□□□□□ -1.9
LINC01541-202ENST00000568095 Q6ZSA8 131 aa3.15□□□□□ -1.9
LINC01541-202ENST00000568095 UQCR11O14957 56 aa3.15□□□□□ -1.91
LINC01541-202ENST00000568095 LY6G6CO95867 125 aa3.15□□□□□ -1.91
LINC01541-202ENST00000568095 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
LINC01541-202ENST00000568095 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 592.5 ms