RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
VPS9D1-206ENST00000567379 SERP2Q8N6R1 65 aa6.29□□□□□ -1.4
VPS9D1-206ENST00000567379 LINC00304Q8N9R0 145 aa6.29□□□□□ -1.4
VPS9D1-206ENST00000567379 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
VPS9D1-206ENST00000567379 COX7CP15954 63 aa6.27□□□□□ -1.41
VPS9D1-206ENST00000567379 A0A1B0GVX0 72 aa6.26□□□□□ -1.41
VPS9D1-206ENST00000567379 UQCRQO14949 82 aa6.26□□□□□ -1.41
VPS9D1-206ENST00000567379 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
VPS9D1-206ENST00000567379 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
VPS9D1-206ENST00000567379 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
VPS9D1-206ENST00000567379 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
VPS9D1-206ENST00000567379 IGHV6-1A0A0B4J1U7 121 aa6.24□□□□□ -1.41
VPS9D1-206ENST00000567379 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
VPS9D1-206ENST00000567379 C1orf195Q5TG92 126 aa6.24□□□□□ -1.41
VPS9D1-206ENST00000567379 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
VPS9D1-206ENST00000567379 J3QL48 77 aa6.23□□□□□ -1.41
VPS9D1-206ENST00000567379 C8orf17Q9NRJ1 99 aa6.23□□□□□ -1.41
VPS9D1-206ENST00000567379 FAT1Q14517 4588 aa6.23□□□□□ -1.41
VPS9D1-206ENST00000567379 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
VPS9D1-206ENST00000567379 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
VPS9D1-206ENST00000567379 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
VPS9D1-206ENST00000567379 hDV103S1A0JD37 113 aa6.21□□□□□ -1.42
VPS9D1-206ENST00000567379 C8orf87E5RJ46 101 aa6.21□□□□□ -1.42
VPS9D1-206ENST00000567379 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
VPS9D1-206ENST00000567379 LINC00313P59037 77 aa6.16□□□□□ -1.42
VPS9D1-206ENST00000567379 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
VPS9D1-206ENST00000567379 C20orf197Q8N268 126 aa6.16□□□□□ -1.42
VPS9D1-206ENST00000567379 MRPL34Q9BQ48 92 aaKnown RBP6.16□□□□□ -1.42
VPS9D1-206ENST00000567379 RNF213Q63HN8 5207 aa6.15□□□□□ -1.42
VPS9D1-206ENST00000567379 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
VPS9D1-206ENST00000567379 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
VPS9D1-206ENST00000567379 NDUFS5O43920 106 aa6.13□□□□□ -1.43
VPS9D1-206ENST00000567379 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
VPS9D1-206ENST00000567379 MP68P56378 58 aa6.11□□□□□ -1.43
VPS9D1-206ENST00000567379 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
VPS9D1-206ENST00000567379 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
VPS9D1-206ENST00000567379 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
VPS9D1-206ENST00000567379 H0Y9P7 68 aa6.08□□□□□ -1.44
VPS9D1-206ENST00000567379 H3BPC8 53 aa6.08□□□□□ -1.44
VPS9D1-206ENST00000567379 OXTP01178 125 aa6.08□□□□□ -1.44
VPS9D1-206ENST00000567379 NDUFC1O43677 76 aa6.07□□□□□ -1.44
VPS9D1-206ENST00000567379 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
VPS9D1-206ENST00000567379 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
VPS9D1-206ENST00000567379 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
VPS9D1-206ENST00000567379 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
VPS9D1-206ENST00000567379 LINC00208Q96KT6 92 aa6.05□□□□□ -1.44
VPS9D1-206ENST00000567379 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
VPS9D1-206ENST00000567379 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
VPS9D1-206ENST00000567379 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
VPS9D1-206ENST00000567379 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
VPS9D1-206ENST00000567379 TMEM258P61165 79 aa6.03□□□□□ -1.44
VPS9D1-206ENST00000567379 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
VPS9D1-206ENST00000567379 H7BZZ5 65 aa6.02□□□□□ -1.45
VPS9D1-206ENST00000567379 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
VPS9D1-206ENST00000567379 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
VPS9D1-206ENST00000567379 C9orf92A6NGG3 77 aa6□□□□□ -1.45
VPS9D1-206ENST00000567379 LRP2P98164 4655 aa5.99□□□□□ -1.45
VPS9D1-206ENST00000567379 FAT3Q8TDW7 4589 aa5.99□□□□□ -1.45
VPS9D1-206ENST00000567379 TNXBP22105 4242 aa5.98□□□□□ -1.45
VPS9D1-206ENST00000567379 Q5W150 140 aa5.98□□□□□ -1.45
VPS9D1-206ENST00000567379 FAM236DA0A1B0GTK5 79 aa5.97□□□□□ -1.45
VPS9D1-206ENST00000567379 FAM236CP0DP71 79 aa5.97□□□□□ -1.45
VPS9D1-206ENST00000567379 LRP1Q07954 4544 aaKnown RBP5.97□□□□□ -1.45
VPS9D1-206ENST00000567379 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
VPS9D1-206ENST00000567379 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
VPS9D1-206ENST00000567379 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.46
VPS9D1-206ENST00000567379 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
VPS9D1-206ENST00000567379 A8MUU9 505 aa5.94□□□□□ -1.46
VPS9D1-206ENST00000567379 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
VPS9D1-206ENST00000567379 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
VPS9D1-206ENST00000567379 PRR4Q16378 134 aa5.91□□□□□ -1.46
VPS9D1-206ENST00000567379 IGKV2-30P06310 120 aa5.9□□□□□ -1.46
VPS9D1-206ENST00000567379 PCOTHQ58A44 107 aa5.9□□□□□ -1.46
VPS9D1-206ENST00000567379 Q75L30 129 aa5.9□□□□□ -1.46
VPS9D1-206ENST00000567379 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
VPS9D1-206ENST00000567379 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
VPS9D1-206ENST00000567379 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
VPS9D1-206ENST00000567379 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
VPS9D1-206ENST00000567379 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
VPS9D1-206ENST00000567379 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
VPS9D1-206ENST00000567379 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
VPS9D1-206ENST00000567379 XP32Q5T750 250 aa5.83□□□□□ -1.48
VPS9D1-206ENST00000567379 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
VPS9D1-206ENST00000567379 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
VPS9D1-206ENST00000567379 MUC2Q02817 5179 aa5.81□□□□□ -1.48
VPS9D1-206ENST00000567379 HRES1P13985 223 aa5.8□□□□□ -1.48
VPS9D1-206ENST00000567379 SPINK7P58062 85 aa5.76□□□□□ -1.49
VPS9D1-206ENST00000567379 ACYP2P14621 99 aa5.73□□□□□ -1.49
VPS9D1-206ENST00000567379 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
VPS9D1-206ENST00000567379 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
VPS9D1-206ENST00000567379 COA5Q86WW8 74 aa5.72□□□□□ -1.49
VPS9D1-206ENST00000567379 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
VPS9D1-206ENST00000567379 A8MUN3 132 aa5.68□□□□□ -1.5
VPS9D1-206ENST00000567379 C4orf26Q17RF5 130 aa5.68□□□□□ -1.5
VPS9D1-206ENST00000567379 SEC61BP60468 96 aaKnown RBP5.66□□□□□ -1.5
VPS9D1-206ENST00000567379 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
VPS9D1-206ENST00000567379 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
VPS9D1-206ENST00000567379 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
VPS9D1-206ENST00000567379 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
VPS9D1-206ENST00000567379 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 2056.8 ms