RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OXTP01178 125 aa10.45□□□□□ -0.74
COMMD4-208ENST00000563220 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
COMMD4-208ENST00000563220 ATP5EP56381 51 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-208ENST00000563220 SERP1Q9Y6X1 66 aa10.44□□□□□ -0.74
COMMD4-208ENST00000563220 A8MWP4 228 aa10.39□□□□□ -0.75
COMMD4-208ENST00000563220 Q5XG85 94 aa10.38□□□□□ -0.75
COMMD4-208ENST00000563220 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
COMMD4-208ENST00000563220 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
COMMD4-208ENST00000563220 PRR15Q8IV56 129 aa10.38□□□□□ -0.75
COMMD4-208ENST00000563220 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
COMMD4-208ENST00000563220 Q8N1X5 172 aa10.37□□□□□ -0.75
COMMD4-208ENST00000563220 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
COMMD4-208ENST00000563220 SPINK1P00995 79 aa10.35□□□□□ -0.75
COMMD4-208ENST00000563220 C1orf195Q5TG92 126 aa10.32□□□□□ -0.76
COMMD4-208ENST00000563220 NDUFB1O75438 58 aa10.32□□□□□ -0.76
COMMD4-208ENST00000563220 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
COMMD4-208ENST00000563220 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
COMMD4-208ENST00000563220 C5orf47Q569G3 176 aa10.31□□□□□ -0.76
COMMD4-208ENST00000563220 SPAG11AQ6PDA7 123 aa10.31□□□□□ -0.76
COMMD4-208ENST00000563220 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
COMMD4-208ENST00000563220 A0A1B0GVX0 72 aa10.27□□□□□ -0.76
COMMD4-208ENST00000563220 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.76
COMMD4-208ENST00000563220 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-208ENST00000563220 RPS29P62273 56 aaKnown RBP10.27□□□□□ -0.77
COMMD4-208ENST00000563220 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
COMMD4-208ENST00000563220 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
COMMD4-208ENST00000563220 MMP24-AS1A0A0U1RRL7 71 aa10.25□□□□□ -0.77
COMMD4-208ENST00000563220 SMIM26A0A096LP01 95 aa10.25□□□□□ -0.77
COMMD4-208ENST00000563220 TNXBP22105 4242 aa10.24□□□□□ -0.77
COMMD4-208ENST00000563220 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
COMMD4-208ENST00000563220 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
COMMD4-208ENST00000563220 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
COMMD4-208ENST00000563220 CASC2Q6XLA1 102 aa10.23□□□□□ -0.77
COMMD4-208ENST00000563220 FLG2Q5D862 2391 aaPredicted RBP10.21□□□□□ -0.78
COMMD4-208ENST00000563220 KRTAP4-5Q9BYR2 181 aa10.2□□□□□ -0.78
COMMD4-208ENST00000563220 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
COMMD4-208ENST00000563220 hDV103S1A0JD37 113 aa10.19□□□□□ -0.78
COMMD4-208ENST00000563220 MP68P56378 58 aa10.17□□□□□ -0.78
COMMD4-208ENST00000563220 H3BPC8 53 aa10.16□□□□□ -0.78
COMMD4-208ENST00000563220 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
COMMD4-208ENST00000563220 MYCBP2O75592 4640 aa10.15□□□□□ -0.79
COMMD4-208ENST00000563220 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
COMMD4-208ENST00000563220 BIRC6Q9NR09 4857 aa10.12□□□□□ -0.79
COMMD4-208ENST00000563220 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
COMMD4-208ENST00000563220 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
COMMD4-208ENST00000563220 LINC00313P59037 77 aa10.1□□□□□ -0.79
COMMD4-208ENST00000563220 MRPL34Q9BQ48 92 aaKnown RBP10.1□□□□□ -0.79
COMMD4-208ENST00000563220 TRAV22A0A0B4J277 110 aa10.09□□□□□ -0.79
COMMD4-208ENST00000563220 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
COMMD4-208ENST00000563220 H0Y9P7 68 aa10.08□□□□□ -0.8
COMMD4-208ENST00000563220 LINC00208Q96KT6 92 aa10.06□□□□□ -0.8
COMMD4-208ENST00000563220 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
COMMD4-208ENST00000563220 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
COMMD4-208ENST00000563220 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
COMMD4-208ENST00000563220 C1orf64Q8NEQ6 169 aa10.03□□□□□ -0.8
COMMD4-208ENST00000563220 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
COMMD4-208ENST00000563220 NDUFS5O43920 106 aa10.02□□□□□ -0.8
COMMD4-208ENST00000563220 HERC2O95714 4834 aa10.02□□□□□ -0.81
COMMD4-208ENST00000563220 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
COMMD4-208ENST00000563220 ABCA13Q86UQ4 5058 aa9.97□□□□□ -0.81
COMMD4-208ENST00000563220 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
COMMD4-208ENST00000563220 Q1T7F1 81 aa9.92□□□□□ -0.82
COMMD4-208ENST00000563220 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
COMMD4-208ENST00000563220 Q5W150 140 aa9.91□□□□□ -0.82
COMMD4-208ENST00000563220 PRR4Q16378 134 aa9.91□□□□□ -0.82
COMMD4-208ENST00000563220 KRTAP13-3Q3SY46 172 aa9.87□□□□□ -0.83
COMMD4-208ENST00000563220 IGLV7-46A0A075B6I9 117 aa9.87□□□□□ -0.83
COMMD4-208ENST00000563220 PRO0628Q9UI54 55 aa9.85□□□□□ -0.83
COMMD4-208ENST00000563220 V9GYY9 64 aa9.82□□□□□ -0.84
COMMD4-208ENST00000563220 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
COMMD4-208ENST00000563220 A8MUU9 505 aa9.81□□□□□ -0.84
COMMD4-208ENST00000563220 J3QL48 77 aa9.78□□□□□ -0.84
COMMD4-208ENST00000563220 LOC101927531A0A1B0GV80 90 aa9.75□□□□□ -0.85
COMMD4-208ENST00000563220 PCOTHQ58A44 107 aa9.75□□□□□ -0.85
COMMD4-208ENST00000563220 COA5Q86WW8 74 aa9.72□□□□□ -0.85
COMMD4-208ENST00000563220 Q75L30 129 aa9.72□□□□□ -0.85
COMMD4-208ENST00000563220 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
COMMD4-208ENST00000563220 XP32Q5T750 250 aa9.69□□□□□ -0.86
COMMD4-208ENST00000563220 IGKV2-30P06310 120 aa9.68□□□□□ -0.86
COMMD4-208ENST00000563220 PSPHP1O15172 72 aa9.66□□□□□ -0.86
COMMD4-208ENST00000563220 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
COMMD4-208ENST00000563220 A8MUN3 132 aa9.64□□□□□ -0.87
COMMD4-208ENST00000563220 TPRXLQ17RH7 258 aa9.64□□□□□ -0.87
COMMD4-208ENST00000563220 RPL37P61927 97 aaKnown RBP9.62□□□□□ -0.87
COMMD4-208ENST00000563220 Q5VV11 94 aa9.62□□□□□ -0.87
COMMD4-208ENST00000563220 HRES1P13985 223 aa9.59□□□□□ -0.87
COMMD4-208ENST00000563220 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
COMMD4-208ENST00000563220 LPAP08519 4548 aa9.58□□□□□ -0.88
COMMD4-208ENST00000563220 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
COMMD4-208ENST00000563220 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
COMMD4-208ENST00000563220 PRR15LQ9BU68 103 aa9.54□□□□□ -0.88
COMMD4-208ENST00000563220 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
COMMD4-208ENST00000563220 LRP2P98164 4655 aa9.52□□□□□ -0.89
COMMD4-208ENST00000563220 SPINK7P58062 85 aa9.51□□□□□ -0.89
COMMD4-208ENST00000563220 ACYP2P14621 99 aa9.5□□□□□ -0.89
COMMD4-208ENST00000563220 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
COMMD4-208ENST00000563220 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
COMMD4-208ENST00000563220 HERC1Q15751 4861 aa9.43□□□□□ -0.9
COMMD4-208ENST00000563220 A6NED7 52 aa9.36□□□□□ -0.91
COMMD4-208ENST00000563220 LCA10Q71F78 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms