RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
CNOT1-204ENST00000563130 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
CNOT1-204ENST00000563130 SIGMAR1Q99720 223 aa3.42□□□□□ -1.86
CNOT1-204ENST00000563130 TCL1BO95988 128 aa3.41□□□□□ -1.86
CNOT1-204ENST00000563130 TEN1Q86WV5 123 aa3.41□□□□□ -1.86
CNOT1-204ENST00000563130 NAA38Q9BRA0 125 aaKnown RBP3.41□□□□□ -1.86
CNOT1-204ENST00000563130 A0A1W2PNM2 257 aa3.4□□□□□ -1.87
CNOT1-204ENST00000563130 SCGB1A1P11684 91 aa3.4□□□□□ -1.87
CNOT1-204ENST00000563130 BATFQ16520 125 aa3.39□□□□□ -1.87
CNOT1-204ENST00000563130 TAX1BP3O14907 124 aa3.39□□□□□ -1.87
CNOT1-204ENST00000563130 ATXN8Q156A1 80 aa3.39□□□□□ -1.87
CNOT1-204ENST00000563130 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
CNOT1-204ENST00000563130 TRBV7-4A0A0J9YYF1 115 aa3.38□□□□□ -1.87
CNOT1-204ENST00000563130 BAALC-AS2P0C853 105 aa3.38□□□□□ -1.87
CNOT1-204ENST00000563130 ANKRD29Q8N6D5 301 aa3.38□□□□□ -1.87
CNOT1-204ENST00000563130 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 A0A087WSZ3 146 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 LYRM7Q5U5X0 104 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 SS18L2Q9UHA2 77 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 IGKV2-30P06310 120 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
CNOT1-204ENST00000563130 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
CNOT1-204ENST00000563130 RBM3P98179 157 aaKnown RBP3.36□□□□□ -1.87
CNOT1-204ENST00000563130 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-204ENST00000563130 Q96NJ1 140 aa3.36□□□□□ -1.87
CNOT1-204ENST00000563130 A0A1W2PPM0 123 aa3.36□□□□□ -1.87
CNOT1-204ENST00000563130 CCKP06307 115 aa3.35□□□□□ -1.87
CNOT1-204ENST00000563130 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
CNOT1-204ENST00000563130 JMJD7-PLA2G4BH0Y9G9 81 aa3.34□□□□□ -1.87
CNOT1-204ENST00000563130 OBSCN-AS1Q96MR7 158 aa3.34□□□□□ -1.87
CNOT1-204ENST00000563130 C9JAW5 83 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 KRTAP4-1Q9BYQ7 146 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 LOC110117498A0A087WWA1 95 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 A0A0U1RQV1 116 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 COL5A1-AS1Q5SY13 56 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 LINC00472Q9H8W2 130 aa3.33□□□□□ -1.88
CNOT1-204ENST00000563130 H3BT86 120 aa3.32□□□□□ -1.88
CNOT1-204ENST00000563130 Q6ZQT0 140 aa3.32□□□□□ -1.88
CNOT1-204ENST00000563130 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
CNOT1-204ENST00000563130 C8orf87E5RJ46 101 aa3.32□□□□□ -1.88
CNOT1-204ENST00000563130 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
CNOT1-204ENST00000563130 A0A1B0GW54 56 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 NDUFS5O43920 106 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 PDE6GP18545 87 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 VPS25Q9BRG1 176 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 SPCS1Q9Y6A9 102 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
CNOT1-204ENST00000563130 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
CNOT1-204ENST00000563130 K7ERU9 68 aa3.3□□□□□ -1.88
CNOT1-204ENST00000563130 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
CNOT1-204ENST00000563130 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
CNOT1-204ENST00000563130 FAM236DA0A1B0GTK5 79 aa3.29□□□□□ -1.88
CNOT1-204ENST00000563130 FAM236CP0DP71 79 aa3.29□□□□□ -1.88
CNOT1-204ENST00000563130 DEFB116Q30KQ4 102 aa3.29□□□□□ -1.88
CNOT1-204ENST00000563130 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
CNOT1-204ENST00000563130 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
CNOT1-204ENST00000563130 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
CNOT1-204ENST00000563130 K7EP34 96 aa3.28□□□□□ -1.88
CNOT1-204ENST00000563130 A8MUU9 505 aa3.27□□□□□ -1.89
CNOT1-204ENST00000563130 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
CNOT1-204ENST00000563130 J3KT08 172 aa3.27□□□□□ -1.89
CNOT1-204ENST00000563130 PSPHP1O15172 72 aa3.27□□□□□ -1.89
CNOT1-204ENST00000563130 DSCR10P59022 87 aa3.27□□□□□ -1.89
CNOT1-204ENST00000563130 LINC00313P59037 77 aa3.26□□□□□ -1.89
CNOT1-204ENST00000563130 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
CNOT1-204ENST00000563130 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
CNOT1-204ENST00000563130 A0A1B0GVX0 72 aa3.26□□□□□ -1.89
CNOT1-204ENST00000563130 ATP11AUNQ6ZP68 121 aa3.25□□□□□ -1.89
CNOT1-204ENST00000563130 IGHV6-1A0A0B4J1U7 121 aa3.24□□□□□ -1.89
CNOT1-204ENST00000563130 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
CNOT1-204ENST00000563130 GTF2H5Q6ZYL4 71 aa3.24□□□□□ -1.89
CNOT1-204ENST00000563130 A8MWP4 228 aa3.23□□□□□ -1.89
CNOT1-204ENST00000563130 NREPQ16612 68 aa3.23□□□□□ -1.89
CNOT1-204ENST00000563130 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
CNOT1-204ENST00000563130 F8W1H4 67 aa3.22□□□□□ -1.89
CNOT1-204ENST00000563130 NDUFB1O75438 58 aa3.22□□□□□ -1.89
CNOT1-204ENST00000563130 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
CNOT1-204ENST00000563130 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
CNOT1-204ENST00000563130 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
CNOT1-204ENST00000563130 ANAPC13Q9BS18 74 aa3.2□□□□□ -1.9
CNOT1-204ENST00000563130 MP68P56378 58 aa3.19□□□□□ -1.9
CNOT1-204ENST00000563130 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
CNOT1-204ENST00000563130 LINC00846Q9NV44 126 aa3.19□□□□□ -1.9
CNOT1-204ENST00000563130 K7EQZ3 153 aa3.19□□□□□ -1.9
CNOT1-204ENST00000563130 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
CNOT1-204ENST00000563130 BPY2O14599 106 aa3.18□□□□□ -1.9
CNOT1-204ENST00000563130 MT1HP80294 61 aa3.18□□□□□ -1.9
CNOT1-204ENST00000563130 CXCL6P80162 114 aa3.18□□□□□ -1.9
CNOT1-204ENST00000563130 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
CNOT1-204ENST00000563130 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
CNOT1-204ENST00000563130 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
CNOT1-204ENST00000563130 ZCCHC13Q8WW36 166 aaKnown RBP3.17□□□□□ -1.9
CNOT1-204ENST00000563130 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
CNOT1-204ENST00000563130 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
CNOT1-204ENST00000563130 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
CNOT1-204ENST00000563130 hDV103S1A0JD37 113 aa3.16□□□□□ -1.9
CNOT1-204ENST00000563130 Q8N9L7 120 aa3.16□□□□□ -1.9
CNOT1-204ENST00000563130 HRES1P13985 223 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms