RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 J3QQQ9 107 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 HBDP02042 147 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 S100PP25815 95 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 NDUFA6P56556 154 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 RHEBQ15382 184 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 SEC11CQ9BY50 192 aa1.54□□□□□ -2.16
HERC1-215ENST00000561436 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
HERC1-215ENST00000561436 NCR3O14931 201 aa1.53□□□□□ -2.16
HERC1-215ENST00000561436 SMIM13P0DJ93 91 aa1.53□□□□□ -2.16
HERC1-215ENST00000561436 TMEM258P61165 79 aa1.53□□□□□ -2.16
HERC1-215ENST00000561436 IGLV5-48A0A075B6I7 105 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 PLNP26678 52 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
HERC1-215ENST00000561436 Q6JHZ5 121 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 Q6Q795 121 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 COPS9Q8WXC6 57 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 CHCHD1Q96BP2 118 aaKnown RBP1.52□□□□□ -2.17
HERC1-215ENST00000561436 SPANXDQ9BXN6 97 aa1.52□□□□□ -2.17
HERC1-215ENST00000561436 NHP2Q9NX24 153 aaKnown RBP1.52□□□□□ -2.17
HERC1-215ENST00000561436 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 LEPROTO15243 131 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 TIMM17BO60830 172 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 MT2AP02795 61 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 COX7BP24311 80 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 HIST1H4AP62805 103 aaKnown RBP1.51□□□□□ -2.17
HERC1-215ENST00000561436 IFI27L1Q96BM0 104 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 SPANXCQ9NY87 97 aa1.51□□□□□ -2.17
HERC1-215ENST00000561436 TRAV13-2A0A0B4J235 113 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 HRCT1Q6UXD1 115 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 SOSTDC1Q6X4U4 206 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 PPDPFLQ8WWR9 84 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 PRO2289Q9P1D8 64 aa1.5□□□□□ -2.17
HERC1-215ENST00000561436 TRBV7-7A0A0K0K1E9 115 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 F8WEM9 126 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 LST1O00453 97 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 MT1FP04733 61 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 C18orf32Q8TCD1 76 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 SS18L2Q9UHA2 77 aa1.49□□□□□ -2.17
HERC1-215ENST00000561436 TMEM218A2RU14 115 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 IFITM1P13164 125 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 OR13C6PQ8NH95 151 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 CLEC2BQ92478 149 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 OBSCN-AS1Q96MR7 158 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 TTTY13Q9BZ97 58 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 HSPB8Q9UJY1 196 aa1.48□□□□□ -2.17
HERC1-215ENST00000561436 FAM236DA0A1B0GTK5 79 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 DPM2O94777 84 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 FAM236CP0DP71 79 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 OCIAD2Q56VL3 154 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 Q96NJ1 140 aa1.47□□□□□ -2.17
HERC1-215ENST00000561436 TRAV7A0A075B6U4 112 aa1.46□□□□□ -2.18
HERC1-215ENST00000561436 LEPROTL1O95214 131 aa1.46□□□□□ -2.18
HERC1-215ENST00000561436 IGKCP01834 107 aa1.46□□□□□ -2.18
HERC1-215ENST00000561436 KRTAP13-4Q3LI77 160 aa1.46□□□□□ -2.18
HERC1-215ENST00000561436 CLLU1Q5K131 121 aa1.46□□□□□ -2.18
HERC1-215ENST00000561436 FLGP20930 4061 aaPredicted RBP1.46□□□□□ -2.18
HERC1-215ENST00000561436 H3BT86 120 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 SNCGO76070 127 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 C3orf79P0CE67 100 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 PMCHL1Q16048 86 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 NDUFA5Q16718 116 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.45□□□□□ -2.18
HERC1-215ENST00000561436 TEN1Q86WV5 123 aa1.45□□□□□ -2.18
HERC1-215ENST00000561436 hADV29S1A0JD25 119 aa1.44□□□□□ -2.18
HERC1-215ENST00000561436 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
HERC1-215ENST00000561436 PMAIP1Q13794 54 aa1.44□□□□□ -2.18
HERC1-215ENST00000561436 LINC00575Q6W349 94 aa1.44□□□□□ -2.18
HERC1-215ENST00000561436 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
HERC1-215ENST00000561436 A8MUN3 132 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 BVES-AS1Q5T3Y7 98 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 LINC01545Q5VT33 79 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 COA5Q86WW8 74 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 SVBPQ8N300 66 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 C12orf57Q99622 126 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 SNHG12Q9BXW3 62 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
HERC1-215ENST00000561436 TRGC2P03986 189 aa1.42□□□□□ -2.18
HERC1-215ENST00000561436 SMIM11BQ8TCY0 68 aa1.42□□□□□ -2.18
HERC1-215ENST00000561436 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
HERC1-215ENST00000561436 TRBV7-4A0A0J9YYF1 115 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 A0A1B0GX51 115 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 A6NN06 94 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 FABP4P15090 132 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 FXYD2P54710 66 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 NPC2P61916 151 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 Q6ZQY7 126 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 RAB37Q96AX2 223 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 DSCR8Q96T75 97 aa1.41□□□□□ -2.18
HERC1-215ENST00000561436 A0A087WSZ3 146 aa1.4□□□□□ -2.19
HERC1-215ENST00000561436 H0YGX0 51 aa1.4□□□□□ -2.19
HERC1-215ENST00000561436 SYS1-DBNDD2H3BUS1 97 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms