RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
TPM1-231ENST00000561395 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
TPM1-231ENST00000561395 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
TPM1-231ENST00000561395 SSBP3-AS1Q7Z2R9 100 aa4.41□□□□□ -1.7
TPM1-231ENST00000561395 BPY2O14599 106 aa4.4□□□□□ -1.71
TPM1-231ENST00000561395 CD164Q04900 197 aa4.39□□□□□ -1.71
TPM1-231ENST00000561395 HRCT1Q6UXD1 115 aa4.39□□□□□ -1.71
TPM1-231ENST00000561395 SS18L2Q9UHA2 77 aa4.39□□□□□ -1.71
TPM1-231ENST00000561395 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
TPM1-231ENST00000561395 A0A087WVE0 104 aa4.38□□□□□ -1.71
TPM1-231ENST00000561395 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
TPM1-231ENST00000561395 HIST1H4AP62805 103 aaKnown RBP4.38□□□□□ -1.71
TPM1-231ENST00000561395 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
TPM1-231ENST00000561395 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
TPM1-231ENST00000561395 IGKV4-1P06312 121 aa4.37□□□□□ -1.71
TPM1-231ENST00000561395 Q8N9L7 120 aa4.37□□□□□ -1.71
TPM1-231ENST00000561395 LINC00472Q9H8W2 130 aa4.37□□□□□ -1.71
TPM1-231ENST00000561395 DSCR10P59022 87 aa4.36□□□□□ -1.71
TPM1-231ENST00000561395 TYMSOSQ8TAI1 123 aa4.36□□□□□ -1.71
TPM1-231ENST00000561395 Q96NJ1 140 aa4.36□□□□□ -1.71
TPM1-231ENST00000561395 LPAP08519 4548 aa4.35□□□□□ -1.71
TPM1-231ENST00000561395 DEFB116Q30KQ4 102 aa4.35□□□□□ -1.71
TPM1-231ENST00000561395 LCE3BQ5TA77 95 aa4.35□□□□□ -1.71
TPM1-231ENST00000561395 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
TPM1-231ENST00000561395 J3KT08 172 aa4.34□□□□□ -1.71
TPM1-231ENST00000561395 K7EQZ3 153 aa4.34□□□□□ -1.71
TPM1-231ENST00000561395 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
TPM1-231ENST00000561395 Q5XG85 94 aa4.33□□□□□ -1.72
TPM1-231ENST00000561395 A8MWP4 228 aa4.32□□□□□ -1.72
TPM1-231ENST00000561395 ATOX1O00244 68 aa4.32□□□□□ -1.72
TPM1-231ENST00000561395 LINC00304Q8N9R0 145 aa4.32□□□□□ -1.72
TPM1-231ENST00000561395 MUC2Q02817 5179 aa4.31□□□□□ -1.72
TPM1-231ENST00000561395 SPINK1P00995 79 aa4.31□□□□□ -1.72
TPM1-231ENST00000561395 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
TPM1-231ENST00000561395 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
TPM1-231ENST00000561395 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
TPM1-231ENST00000561395 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
TPM1-231ENST00000561395 HCG22E2RYF7 251 aa4.29□□□□□ -1.72
TPM1-231ENST00000561395 NDUFB1O75438 58 aa4.29□□□□□ -1.72
TPM1-231ENST00000561395 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
TPM1-231ENST00000561395 SPAG11AQ6PDA7 123 aa4.29□□□□□ -1.72
TPM1-231ENST00000561395 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
TPM1-231ENST00000561395 C1orf195Q5TG92 126 aa4.28□□□□□ -1.72
TPM1-231ENST00000561395 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
TPM1-231ENST00000561395 MMP24-AS1A0A0U1RRL7 71 aa4.27□□□□□ -1.73
TPM1-231ENST00000561395 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
TPM1-231ENST00000561395 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
TPM1-231ENST00000561395 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
TPM1-231ENST00000561395 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
TPM1-231ENST00000561395 TRAV7A0A075B6U4 112 aa4.25□□□□□ -1.73
TPM1-231ENST00000561395 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
TPM1-231ENST00000561395 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
TPM1-231ENST00000561395 C8orf17Q9NRJ1 99 aa4.25□□□□□ -1.73
TPM1-231ENST00000561395 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
TPM1-231ENST00000561395 COX7CP15954 63 aa4.24□□□□□ -1.73
TPM1-231ENST00000561395 PRR4Q16378 134 aa4.24□□□□□ -1.73
TPM1-231ENST00000561395 OCR1Q9BZK8 76 aa4.24□□□□□ -1.73
TPM1-231ENST00000561395 hDV103S1A0JD37 113 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 C8orf87E5RJ46 101 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 UQCRQO14949 82 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
TPM1-231ENST00000561395 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
TPM1-231ENST00000561395 TMEM254Q8TBM7 123 aa4.21□□□□□ -1.74
TPM1-231ENST00000561395 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
TPM1-231ENST00000561395 LINC00313P59037 77 aa4.19□□□□□ -1.74
TPM1-231ENST00000561395 MRPL34Q9BQ48 92 aaKnown RBP4.19□□□□□ -1.74
TPM1-231ENST00000561395 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
TPM1-231ENST00000561395 C20orf197Q8N268 126 aa4.17□□□□□ -1.74
TPM1-231ENST00000561395 RETNLBQ9BQ08 111 aa4.17□□□□□ -1.74
TPM1-231ENST00000561395 TP53AIP1Q9HCN2 124 aa4.17□□□□□ -1.74
TPM1-231ENST00000561395 NDUFS5O43920 106 aa4.16□□□□□ -1.74
TPM1-231ENST00000561395 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
TPM1-231ENST00000561395 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
TPM1-231ENST00000561395 TRAV22A0A0B4J277 110 aa4.14□□□□□ -1.75
TPM1-231ENST00000561395 H0Y9P7 68 aa4.14□□□□□ -1.75
TPM1-231ENST00000561395 FP248Q71RG6 208 aaPredicted RBP4.14□□□□□ -1.75
TPM1-231ENST00000561395 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
TPM1-231ENST00000561395 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
TPM1-231ENST00000561395 SNURFQ9Y675 71 aa4.14□□□□□ -1.75
TPM1-231ENST00000561395 MP68P56378 58 aa4.12□□□□□ -1.75
TPM1-231ENST00000561395 ZCCHC13Q8WW36 166 aaKnown RBP4.12□□□□□ -1.75
TPM1-231ENST00000561395 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
TPM1-231ENST00000561395 H3BPC8 53 aa4.11□□□□□ -1.75
TPM1-231ENST00000561395 KRTAP13-3Q3SY46 172 aa4.11□□□□□ -1.75
TPM1-231ENST00000561395 H7BZZ5 65 aa4.1□□□□□ -1.75
TPM1-231ENST00000561395 NDUFC1O43677 76 aa4.1□□□□□ -1.75
TPM1-231ENST00000561395 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
TPM1-231ENST00000561395 A8MUU9 505 aa4.09□□□□□ -1.75
TPM1-231ENST00000561395 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
TPM1-231ENST00000561395 Q5W150 140 aa4.09□□□□□ -1.75
TPM1-231ENST00000561395 Q75L30 129 aa4.09□□□□□ -1.75
TPM1-231ENST00000561395 C1orf64Q8NEQ6 169 aa4.09□□□□□ -1.75
TPM1-231ENST00000561395 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.75
TPM1-231ENST00000561395 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
TPM1-231ENST00000561395 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
TPM1-231ENST00000561395 TMEM258P61165 79 aa4.08□□□□□ -1.76
TPM1-231ENST00000561395 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms