RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
TNFAIP2-207ENST00000560562 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
TNFAIP2-207ENST00000560562 CD164Q04900 197 aa7.66□□□□□ -1.18
TNFAIP2-207ENST00000560562 Q6ZVQ6 151 aa7.66□□□□□ -1.18
TNFAIP2-207ENST00000560562 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
TNFAIP2-207ENST00000560562 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
TNFAIP2-207ENST00000560562 IGKV3D-7A0A0C4DH55 119 aa7.63□□□□□ -1.19
TNFAIP2-207ENST00000560562 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
TNFAIP2-207ENST00000560562 C1orf195Q5TG92 126 aa7.61□□□□□ -1.19
TNFAIP2-207ENST00000560562 Q5XG85 94 aa7.61□□□□□ -1.19
TNFAIP2-207ENST00000560562 CXCL6P80162 114 aa7.6□□□□□ -1.19
TNFAIP2-207ENST00000560562 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.19
TNFAIP2-207ENST00000560562 KRTAP19-2Q3LHN2 52 aa7.58□□□□□ -1.2
TNFAIP2-207ENST00000560562 PCOTHQ58A44 107 aa7.58□□□□□ -1.2
TNFAIP2-207ENST00000560562 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
TNFAIP2-207ENST00000560562 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
TNFAIP2-207ENST00000560562 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
TNFAIP2-207ENST00000560562 NREPQ16612 68 aa7.55□□□□□ -1.2
TNFAIP2-207ENST00000560562 A0A087WVE0 104 aa7.52□□□□□ -1.2
TNFAIP2-207ENST00000560562 ANAPC13Q9BS18 74 aa7.52□□□□□ -1.21
TNFAIP2-207ENST00000560562 A0A087WSZ3 146 aa7.5□□□□□ -1.21
TNFAIP2-207ENST00000560562 BPY2O14599 106 aa7.49□□□□□ -1.21
TNFAIP2-207ENST00000560562 SS18L2Q9UHA2 77 aa7.49□□□□□ -1.21
TNFAIP2-207ENST00000560562 ATOX1O00244 68 aa7.48□□□□□ -1.21
TNFAIP2-207ENST00000560562 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
TNFAIP2-207ENST00000560562 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
TNFAIP2-207ENST00000560562 MT1HP80294 61 aa7.45□□□□□ -1.22
TNFAIP2-207ENST00000560562 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
TNFAIP2-207ENST00000560562 DSCR10P59022 87 aa7.44□□□□□ -1.22
TNFAIP2-207ENST00000560562 Q8N9L7 120 aa7.43□□□□□ -1.22
TNFAIP2-207ENST00000560562 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
TNFAIP2-207ENST00000560562 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
TNFAIP2-207ENST00000560562 K7EQZ3 153 aa7.38□□□□□ -1.23
TNFAIP2-207ENST00000560562 COX7CP15954 63 aa7.38□□□□□ -1.23
TNFAIP2-207ENST00000560562 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
TNFAIP2-207ENST00000560562 Q96NJ1 140 aa7.38□□□□□ -1.23
TNFAIP2-207ENST00000560562 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
TNFAIP2-207ENST00000560562 J3KT08 172 aa7.36□□□□□ -1.23
TNFAIP2-207ENST00000560562 UQCRQO14949 82 aa7.36□□□□□ -1.23
TNFAIP2-207ENST00000560562 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
TNFAIP2-207ENST00000560562 SMIM20Q8N5G0 67 aa7.36□□□□□ -1.23
TNFAIP2-207ENST00000560562 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
TNFAIP2-207ENST00000560562 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
TNFAIP2-207ENST00000560562 A8MWP4 228 aa7.34□□□□□ -1.23
TNFAIP2-207ENST00000560562 Q75L30 129 aa7.33□□□□□ -1.24
TNFAIP2-207ENST00000560562 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
TNFAIP2-207ENST00000560562 FSIP2Q5CZC0 6907 aa7.32□□□□□ -1.24
TNFAIP2-207ENST00000560562 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
TNFAIP2-207ENST00000560562 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
TNFAIP2-207ENST00000560562 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
TNFAIP2-207ENST00000560562 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
TNFAIP2-207ENST00000560562 NDUFB1O75438 58 aa7.28□□□□□ -1.24
TNFAIP2-207ENST00000560562 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
TNFAIP2-207ENST00000560562 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.25
TNFAIP2-207ENST00000560562 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
TNFAIP2-207ENST00000560562 A8MUU9 505 aa7.26□□□□□ -1.25
TNFAIP2-207ENST00000560562 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
TNFAIP2-207ENST00000560562 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
TNFAIP2-207ENST00000560562 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
TNFAIP2-207ENST00000560562 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
TNFAIP2-207ENST00000560562 WFDC13Q8IUB5 93 aa7.22□□□□□ -1.25
TNFAIP2-207ENST00000560562 M0R2T5 61 aa7.21□□□□□ -1.25
TNFAIP2-207ENST00000560562 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.25
TNFAIP2-207ENST00000560562 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
TNFAIP2-207ENST00000560562 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
TNFAIP2-207ENST00000560562 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
TNFAIP2-207ENST00000560562 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
TNFAIP2-207ENST00000560562 C8orf87E5RJ46 101 aa7.19□□□□□ -1.26
TNFAIP2-207ENST00000560562 LINC00313P59037 77 aa7.19□□□□□ -1.26
TNFAIP2-207ENST00000560562 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
TNFAIP2-207ENST00000560562 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
TNFAIP2-207ENST00000560562 hDV103S1A0JD37 113 aa7.18□□□□□ -1.26
TNFAIP2-207ENST00000560562 TMEM254Q8TBM7 123 aa7.17□□□□□ -1.26
TNFAIP2-207ENST00000560562 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
TNFAIP2-207ENST00000560562 SNURFQ9Y675 71 aa7.13□□□□□ -1.27
TNFAIP2-207ENST00000560562 H7BZZ5 65 aa7.12□□□□□ -1.27
TNFAIP2-207ENST00000560562 TMEM258P61165 79 aa7.11□□□□□ -1.27
TNFAIP2-207ENST00000560562 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
TNFAIP2-207ENST00000560562 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
TNFAIP2-207ENST00000560562 NDUFC1O43677 76 aa7.1□□□□□ -1.27
TNFAIP2-207ENST00000560562 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
TNFAIP2-207ENST00000560562 H3BPC8 53 aa7.07□□□□□ -1.28
TNFAIP2-207ENST00000560562 H0Y9P7 68 aa7.05□□□□□ -1.28
TNFAIP2-207ENST00000560562 HRES1P13985 223 aa7.05□□□□□ -1.28
TNFAIP2-207ENST00000560562 MP68P56378 58 aa7.05□□□□□ -1.28
TNFAIP2-207ENST00000560562 MPLKIPQ8TAP9 179 aa7.05□□□□□ -1.28
TNFAIP2-207ENST00000560562 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
TNFAIP2-207ENST00000560562 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
TNFAIP2-207ENST00000560562 NDUFS5O43920 106 aa7.03□□□□□ -1.28
TNFAIP2-207ENST00000560562 Q8N9P0 234 aaPredicted RBP7.03□□□□□ -1.28
TNFAIP2-207ENST00000560562 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
TNFAIP2-207ENST00000560562 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
TNFAIP2-207ENST00000560562 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
TNFAIP2-207ENST00000560562 ATP5EP56381 51 aaPredicted RBP6.99□□□□□ -1.29
TNFAIP2-207ENST00000560562 USH2AO75445 5202 aa6.98□□□□□ -1.29
TNFAIP2-207ENST00000560562 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
TNFAIP2-207ENST00000560562 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
TNFAIP2-207ENST00000560562 Q5W150 140 aa6.95□□□□□ -1.3
TNFAIP2-207ENST00000560562 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
TNFAIP2-207ENST00000560562 MT2AP02795 61 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms