RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 Q8NBF4 154 aa8.43□□□□□ -1.06
RABGGTA-209ENST00000559551 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
RABGGTA-209ENST00000559551 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-209ENST00000559551 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
RABGGTA-209ENST00000559551 FAM229BQ4G0N7 80 aa8.4□□□□□ -1.06
RABGGTA-209ENST00000559551 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
RABGGTA-209ENST00000559551 BRK1Q8WUW1 75 aa8.38□□□□□ -1.07
RABGGTA-209ENST00000559551 Q8N1X5 172 aa8.36□□□□□ -1.07
RABGGTA-209ENST00000559551 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
RABGGTA-209ENST00000559551 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
RABGGTA-209ENST00000559551 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
RABGGTA-209ENST00000559551 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
RABGGTA-209ENST00000559551 SSBP3-AS1Q7Z2R9 100 aa8.33□□□□□ -1.08
RABGGTA-209ENST00000559551 A0A087WSZ3 146 aa8.33□□□□□ -1.08
RABGGTA-209ENST00000559551 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
RABGGTA-209ENST00000559551 TNXBP22105 4242 aa8.32□□□□□ -1.08
RABGGTA-209ENST00000559551 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-209ENST00000559551 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
RABGGTA-209ENST00000559551 C1orf195Q5TG92 126 aa8.29□□□□□ -1.08
RABGGTA-209ENST00000559551 Q1T7F1 81 aa8.28□□□□□ -1.08
RABGGTA-209ENST00000559551 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
RABGGTA-209ENST00000559551 DSCR10P59022 87 aa8.27□□□□□ -1.09
RABGGTA-209ENST00000559551 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
RABGGTA-209ENST00000559551 CD164Q04900 197 aa8.25□□□□□ -1.09
RABGGTA-209ENST00000559551 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
RABGGTA-209ENST00000559551 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
RABGGTA-209ENST00000559551 NDUFB1O75438 58 aa8.25□□□□□ -1.09
RABGGTA-209ENST00000559551 K7EQZ3 153 aa8.24□□□□□ -1.09
RABGGTA-209ENST00000559551 Q96NJ1 140 aa8.24□□□□□ -1.09
RABGGTA-209ENST00000559551 DEFB116Q30KQ4 102 aa8.23□□□□□ -1.09
RABGGTA-209ENST00000559551 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
RABGGTA-209ENST00000559551 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
RABGGTA-209ENST00000559551 HERC1Q15751 4861 aa8.22□□□□□ -1.09
RABGGTA-209ENST00000559551 V9GYY9 64 aa8.22□□□□□ -1.09
RABGGTA-209ENST00000559551 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
RABGGTA-209ENST00000559551 MP68P56378 58 aa8.19□□□□□ -1.1
RABGGTA-209ENST00000559551 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
RABGGTA-209ENST00000559551 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
RABGGTA-209ENST00000559551 H3BPC8 53 aa8.15□□□□□ -1.11
RABGGTA-209ENST00000559551 SPINK1P00995 79 aa8.15□□□□□ -1.11
RABGGTA-209ENST00000559551 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
RABGGTA-209ENST00000559551 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
RABGGTA-209ENST00000559551 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-209ENST00000559551 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
RABGGTA-209ENST00000559551 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
RABGGTA-209ENST00000559551 SPAG11AQ6PDA7 123 aa8.11□□□□□ -1.11
RABGGTA-209ENST00000559551 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
RABGGTA-209ENST00000559551 PSPHP1O15172 72 aa8.1□□□□□ -1.11
RABGGTA-209ENST00000559551 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
RABGGTA-209ENST00000559551 PRR4Q16378 134 aa8.09□□□□□ -1.11
RABGGTA-209ENST00000559551 KRTAP29-1A8MX34 341 aaPredicted RBP8.09□□□□□ -1.11
RABGGTA-209ENST00000559551 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
RABGGTA-209ENST00000559551 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
RABGGTA-209ENST00000559551 A8MWP4 228 aa8.07□□□□□ -1.12
RABGGTA-209ENST00000559551 H0Y9P7 68 aa8.07□□□□□ -1.12
RABGGTA-209ENST00000559551 SEC61GP60059 68 aa8.07□□□□□ -1.12
RABGGTA-209ENST00000559551 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
RABGGTA-209ENST00000559551 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
RABGGTA-209ENST00000559551 A8MUN3 132 aa8.04□□□□□ -1.12
RABGGTA-209ENST00000559551 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
RABGGTA-209ENST00000559551 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.12
RABGGTA-209ENST00000559551 Q5VV11 94 aa8.02□□□□□ -1.13
RABGGTA-209ENST00000559551 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
RABGGTA-209ENST00000559551 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
RABGGTA-209ENST00000559551 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
RABGGTA-209ENST00000559551 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
RABGGTA-209ENST00000559551 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
RABGGTA-209ENST00000559551 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
RABGGTA-209ENST00000559551 PRR15LQ9BU68 103 aa7.95□□□□□ -1.14
RABGGTA-209ENST00000559551 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
RABGGTA-209ENST00000559551 Q75L30 129 aa7.94□□□□□ -1.14
RABGGTA-209ENST00000559551 COA5Q86WW8 74 aa7.92□□□□□ -1.14
RABGGTA-209ENST00000559551 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
RABGGTA-209ENST00000559551 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
RABGGTA-209ENST00000559551 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.14
RABGGTA-209ENST00000559551 LINC00313P59037 77 aa7.88□□□□□ -1.15
RABGGTA-209ENST00000559551 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
RABGGTA-209ENST00000559551 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
RABGGTA-209ENST00000559551 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
RABGGTA-209ENST00000559551 A6NED7 52 aa7.86□□□□□ -1.15
RABGGTA-209ENST00000559551 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
RABGGTA-209ENST00000559551 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
RABGGTA-209ENST00000559551 A8MU10 97 aa7.85□□□□□ -1.15
RABGGTA-209ENST00000559551 MRPL34Q9BQ48 92 aaKnown RBP7.85□□□□□ -1.15
RABGGTA-209ENST00000559551 J3QL48 77 aa7.84□□□□□ -1.15
RABGGTA-209ENST00000559551 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
RABGGTA-209ENST00000559551 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
RABGGTA-209ENST00000559551 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
RABGGTA-209ENST00000559551 LCA10Q71F78 164 aa7.82□□□□□ -1.16
RABGGTA-209ENST00000559551 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
RABGGTA-209ENST00000559551 NDUFS5O43920 106 aa7.81□□□□□ -1.16
RABGGTA-209ENST00000559551 LPAP08519 4548 aa7.79□□□□□ -1.16
RABGGTA-209ENST00000559551 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
RABGGTA-209ENST00000559551 A6NN06 94 aa7.77□□□□□ -1.17
RABGGTA-209ENST00000559551 Q5W150 140 aa7.75□□□□□ -1.17
RABGGTA-209ENST00000559551 UBR4Q5T4S7 5183 aa7.75□□□□□ -1.17
RABGGTA-209ENST00000559551 LRP2P98164 4655 aa7.74□□□□□ -1.17
RABGGTA-209ENST00000559551 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
RABGGTA-209ENST00000559551 A8MUU9 505 aa7.72□□□□□ -1.17
RABGGTA-209ENST00000559551 HRES1P13985 223 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms