RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 Q8N9L7 120 aa13.41□□□□□ -0.26
MEIS3-204ENST00000558555 K7EQZ3 153 aa13.39□□□□□ -0.27
MEIS3-204ENST00000558555 FP248Q71RG6 208 aaPredicted RBP13.39□□□□□ -0.27
MEIS3-204ENST00000558555 HIST1H4AP62805 103 aaKnown RBP13.39□□□□□ -0.27
MEIS3-204ENST00000558555 PRR15Q8IV56 129 aa13.39□□□□□ -0.27
MEIS3-204ENST00000558555 A0A1B0GVX0 72 aa13.38□□□□□ -0.27
MEIS3-204ENST00000558555 IGHV6-1A0A0B4J1U7 121 aa13.36□□□□□ -0.27
MEIS3-204ENST00000558555 IMUPQ9GZP8 106 aa13.33□□□□□ -0.28
MEIS3-204ENST00000558555 PRR4Q16378 134 aa13.32□□□□□ -0.28
MEIS3-204ENST00000558555 IGLV7-46A0A075B6I9 117 aa13.3□□□□□ -0.28
MEIS3-204ENST00000558555 C8orf87E5RJ46 101 aa13.28□□□□□ -0.28
MEIS3-204ENST00000558555 C8orf17Q9NRJ1 99 aa13.27□□□□□ -0.29
MEIS3-204ENST00000558555 LINC00313P59037 77 aa13.26□□□□□ -0.29
MEIS3-204ENST00000558555 A0A087WVE0 104 aa13.25□□□□□ -0.29
MEIS3-204ENST00000558555 UBR4Q5T4S7 5183 aa13.24□□□□□ -0.29
MEIS3-204ENST00000558555 HCG22E2RYF7 251 aa13.22□□□□□ -0.29
MEIS3-204ENST00000558555 MMP24-AS1A0A0U1RRL7 71 aa13.22□□□□□ -0.29
MEIS3-204ENST00000558555 NOTCH2NLQ7Z3S9 236 aa13.21□□□□□ -0.3
MEIS3-204ENST00000558555 C9orf92A6NGG3 77 aa13.19□□□□□ -0.3
MEIS3-204ENST00000558555 WFDC13Q8IUB5 93 aa13.19□□□□□ -0.3
MEIS3-204ENST00000558555 LRP2P98164 4655 aa13.19□□□□□ -0.3
MEIS3-204ENST00000558555 hDV103S1A0JD37 113 aa13.18□□□□□ -0.3
MEIS3-204ENST00000558555 CASC2Q6XLA1 102 aa13.18□□□□□ -0.3
MEIS3-204ENST00000558555 KRTAP13-3Q3SY46 172 aa13.13□□□□□ -0.31
MEIS3-204ENST00000558555 TMEM254Q8TBM7 123 aa13.13□□□□□ -0.31
MEIS3-204ENST00000558555 TPRXLQ17RH7 258 aa13.1□□□□□ -0.31
MEIS3-204ENST00000558555 MRPL34Q9BQ48 92 aaKnown RBP13.1□□□□□ -0.31
MEIS3-204ENST00000558555 FAM236AA0A1B0GUQ0 79 aa13.08□□□□□ -0.32
MEIS3-204ENST00000558555 FAM236BA0A1B0GV22 79 aa13.08□□□□□ -0.32
MEIS3-204ENST00000558555 KRTAP16-1A8MUX0 517 aa13.08□□□□□ -0.32
MEIS3-204ENST00000558555 SCGB1A1P11684 91 aa13.05□□□□□ -0.32
MEIS3-204ENST00000558555 LPAP08519 4548 aa13.05□□□□□ -0.32
MEIS3-204ENST00000558555 NDUFS5O43920 106 aa13.02□□□□□ -0.33
MEIS3-204ENST00000558555 Q8N9P0 234 aaPredicted RBP12.99□□□□□ -0.33
MEIS3-204ENST00000558555 XP32Q5T750 250 aa12.97□□□□□ -0.33
MEIS3-204ENST00000558555 C20orf166-AS1Q96NR2 134 aa12.96□□□□□ -0.33
MEIS3-204ENST00000558555 A8MUU9 505 aa12.94□□□□□ -0.34
MEIS3-204ENST00000558555 ATOX1O00244 68 aa12.93□□□□□ -0.34
MEIS3-204ENST00000558555 Q75L30 129 aa12.92□□□□□ -0.34
MEIS3-204ENST00000558555 TP53AIP1Q9HCN2 124 aa12.91□□□□□ -0.34
MEIS3-204ENST00000558555 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
MEIS3-204ENST00000558555 SMIM20Q8N5G0 67 aa12.89□□□□□ -0.35
MEIS3-204ENST00000558555 OCR1Q9BZK8 76 aa12.87□□□□□ -0.35
MEIS3-204ENST00000558555 RPL37P61927 97 aaKnown RBP12.86□□□□□ -0.35
MEIS3-204ENST00000558555 UQCRQO14949 82 aa12.84□□□□□ -0.35
MEIS3-204ENST00000558555 TRAV7A0A075B6U4 112 aa12.81□□□□□ -0.36
MEIS3-204ENST00000558555 ATP11AUNQ6ZP68 121 aa12.8□□□□□ -0.36
MEIS3-204ENST00000558555 ZCCHC13Q8WW36 166 aaKnown RBP12.79□□□□□ -0.36
MEIS3-204ENST00000558555 SERP2Q8N6R1 65 aa12.75□□□□□ -0.37
MEIS3-204ENST00000558555 TRAV22A0A0B4J277 110 aa12.74□□□□□ -0.37
MEIS3-204ENST00000558555 ANAPC13Q9BS18 74 aa12.74□□□□□ -0.37
MEIS3-204ENST00000558555 Q5W150 140 aa12.74□□□□□ -0.37
MEIS3-204ENST00000558555 C5orf47Q569G3 176 aa12.71□□□□□ -0.37
MEIS3-204ENST00000558555 H0Y9P7 68 aa12.71□□□□□ -0.38
MEIS3-204ENST00000558555 SEC61BP60468 96 aaKnown RBP12.7□□□□□ -0.38
MEIS3-204ENST00000558555 MP68P56378 58 aa12.68□□□□□ -0.38
MEIS3-204ENST00000558555 PCOTHQ58A44 107 aa12.68□□□□□ -0.38
MEIS3-204ENST00000558555 COX7CP15954 63 aa12.62□□□□□ -0.39
MEIS3-204ENST00000558555 MUC2Q02817 5179 aa12.6□□□□□ -0.39
MEIS3-204ENST00000558555 H3BPC8 53 aa12.59□□□□□ -0.39
MEIS3-204ENST00000558555 LINC00208Q96KT6 92 aa12.59□□□□□ -0.39
MEIS3-204ENST00000558555 C1orf64Q8NEQ6 169 aa12.57□□□□□ -0.4
MEIS3-204ENST00000558555 LOC101927531A0A1B0GV80 90 aa12.56□□□□□ -0.4
MEIS3-204ENST00000558555 IGKV2D-30A0A075B6S6 120 aa12.55□□□□□ -0.4
MEIS3-204ENST00000558555 IGKV2-30P06310 120 aa12.55□□□□□ -0.4
MEIS3-204ENST00000558555 C20orf197Q8N268 126 aa12.53□□□□□ -0.4
MEIS3-204ENST00000558555 C7orf65Q6ZTY9 151 aa12.52□□□□□ -0.41
MEIS3-204ENST00000558555 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
MEIS3-204ENST00000558555 SPINK7P58062 85 aa12.49□□□□□ -0.41
MEIS3-204ENST00000558555 SNURFQ9Y675 71 aa12.47□□□□□ -0.41
MEIS3-204ENST00000558555 CYP4F30PQ9H0H9 118 aa12.46□□□□□ -0.41
MEIS3-204ENST00000558555 MUC17Q685J3 4493 aa12.45□□□□□ -0.42
MEIS3-204ENST00000558555 CCDC179H3BU77 68 aa12.42□□□□□ -0.42
MEIS3-204ENST00000558555 KLKP1Q107X0 134 aa12.42□□□□□ -0.42
MEIS3-204ENST00000558555 PCP4P48539 62 aa12.38□□□□□ -0.43
MEIS3-204ENST00000558555 KRTAP4-1Q9BYQ7 146 aa12.33□□□□□ -0.44
MEIS3-204ENST00000558555 NDUFC1O43677 76 aa12.3□□□□□ -0.44
MEIS3-204ENST00000558555 HRES1P13985 223 aa12.26□□□□□ -0.45
MEIS3-204ENST00000558555 CYSTM1Q9H1C7 97 aa12.25□□□□□ -0.45
MEIS3-204ENST00000558555 C4orf26Q17RF5 130 aa12.22□□□□□ -0.45
MEIS3-204ENST00000558555 H7BZZ5 65 aa12.2□□□□□ -0.46
MEIS3-204ENST00000558555 RBM12B-AS1Q9P1G2 102 aa12.2□□□□□ -0.46
MEIS3-204ENST00000558555 FAT4Q6V0I7 4981 aa12.16□□□□□ -0.46
MEIS3-204ENST00000558555 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.46
MEIS3-204ENST00000558555 SPANXA2-OT1Q8N9U9 137 aa12.13□□□□□ -0.47
MEIS3-204ENST00000558555 COX6B2Q6YFQ2 88 aa12.12□□□□□ -0.47
MEIS3-204ENST00000558555 FAM236DA0A1B0GTK5 79 aa12.1□□□□□ -0.47
MEIS3-204ENST00000558555 FAM236CP0DP71 79 aa12.1□□□□□ -0.47
MEIS3-204ENST00000558555 A8MUN3 132 aa12.03□□□□□ -0.48
MEIS3-204ENST00000558555 TMEM258P61165 79 aa12.02□□□□□ -0.49
MEIS3-204ENST00000558555 LCE2AQ5TA79 106 aaPredicted RBP12.01□□□□□ -0.49
MEIS3-204ENST00000558555 DMAC1Q96GE9 116 aa12.01□□□□□ -0.49
MEIS3-204ENST00000558555 KRTAP3-1Q9BYR8 98 aa12□□□□□ -0.49
MEIS3-204ENST00000558555 ATP5EP56381 51 aaPredicted RBP11.97□□□□□ -0.49
MEIS3-204ENST00000558555 H1FX-AS1Q4G0G2 97 aa11.94□□□□□ -0.5
MEIS3-204ENST00000558555 ACYP2P14621 99 aa11.93□□□□□ -0.5
MEIS3-204ENST00000558555 KRTAP19-2Q3LHN2 52 aa11.91□□□□□ -0.5
MEIS3-204ENST00000558555 LCE2CQ5TA81 110 aa11.8□□□□□ -0.52
MEIS3-204ENST00000558555 S4R3F8 94 aa11.8□□□□□ -0.52
MEIS3-204ENST00000558555 CHKB-CPT1BH3BT56 60 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms