RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
GABPB1-207ENST00000558335 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
GABPB1-207ENST00000558335 A0A1B0GU69 56 aa3.35□□□□□ -1.87
GABPB1-207ENST00000558335 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
GABPB1-207ENST00000558335 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
GABPB1-207ENST00000558335 VWFP04275 2813 aa3.35□□□□□ -1.87
GABPB1-207ENST00000558335 OTOGQ6ZRI0 2925 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 CUBNO60494 3623 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 MMP24-AS1A0A0U1RRL7 71 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 A0A1B0GVX0 72 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 ZNF861PO60384 105 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 HRES1P13985 223 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 C8orf17Q9NRJ1 99 aa3.34□□□□□ -1.87
GABPB1-207ENST00000558335 IGLV9-49A0A0B4J1Y8 123 aa3.33□□□□□ -1.88
GABPB1-207ENST00000558335 PRB2P02812 416 aaPredicted RBP3.33□□□□□ -1.88
GABPB1-207ENST00000558335 CHTF8P0CG12 524 aa3.33□□□□□ -1.88
GABPB1-207ENST00000558335 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
GABPB1-207ENST00000558335 MRPL34Q9BQ48 92 aaKnown RBP3.33□□□□□ -1.88
GABPB1-207ENST00000558335 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
GABPB1-207ENST00000558335 DEFB116Q30KQ4 102 aa3.32□□□□□ -1.88
GABPB1-207ENST00000558335 KRTAP1-5Q9BYS1 174 aa3.32□□□□□ -1.88
GABPB1-207ENST00000558335 IGLV5-52A0A0A0MRZ9 124 aa3.31□□□□□ -1.88
GABPB1-207ENST00000558335 A0A087WTM6 91 aa3.3□□□□□ -1.88
GABPB1-207ENST00000558335 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-207ENST00000558335 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
GABPB1-207ENST00000558335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.3□□□□□ -1.88
GABPB1-207ENST00000558335 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
GABPB1-207ENST00000558335 WWC2-AS2Q96NR7 200 aa3.29□□□□□ -1.88
GABPB1-207ENST00000558335 HECTD1Q9ULT8 2610 aa3.28□□□□□ -1.88
GABPB1-207ENST00000558335 Q96NJ1 140 aa3.28□□□□□ -1.88
GABPB1-207ENST00000558335 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.88
GABPB1-207ENST00000558335 IGLV7-43P04211 117 aa3.27□□□□□ -1.89
GABPB1-207ENST00000558335 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
GABPB1-207ENST00000558335 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
GABPB1-207ENST00000558335 MAST4O15021 2626 aa3.27□□□□□ -1.89
GABPB1-207ENST00000558335 DNAH1Q9P2D7 4330 aa3.27□□□□□ -1.89
GABPB1-207ENST00000558335 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
GABPB1-207ENST00000558335 P0C880 135 aa3.26□□□□□ -1.89
GABPB1-207ENST00000558335 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
GABPB1-207ENST00000558335 F8P00451 2351 aa3.25□□□□□ -1.89
GABPB1-207ENST00000558335 Q5W150 140 aa3.25□□□□□ -1.89
GABPB1-207ENST00000558335 KRTAP11-1Q8IUC1 163 aa3.25□□□□□ -1.89
GABPB1-207ENST00000558335 BAHCC1Q9P281 2608 aa3.25□□□□□ -1.89
GABPB1-207ENST00000558335 TENM3Q9P273 2699 aa3.24□□□□□ -1.89
GABPB1-207ENST00000558335 A8MUU9 505 aa3.24□□□□□ -1.89
GABPB1-207ENST00000558335 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
GABPB1-207ENST00000558335 FLNBO75369 2602 aaKnown RBP3.23□□□□□ -1.89
GABPB1-207ENST00000558335 ANAPC11Q9NYG5 84 aa3.23□□□□□ -1.89
GABPB1-207ENST00000558335 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
GABPB1-207ENST00000558335 TRRAPQ9Y4A5 3859 aa3.21□□□□□ -1.89
GABPB1-207ENST00000558335 PKD1L1Q8TDX9 2849 aa3.21□□□□□ -1.9
GABPB1-207ENST00000558335 CMYA5Q8N3K9 4069 aa3.21□□□□□ -1.9
GABPB1-207ENST00000558335 PANO1I0J062 215 aa3.21□□□□□ -1.9
GABPB1-207ENST00000558335 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
GABPB1-207ENST00000558335 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
GABPB1-207ENST00000558335 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.9
GABPB1-207ENST00000558335 STAB1Q9NY15 2570 aa3.2□□□□□ -1.9
GABPB1-207ENST00000558335 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
GABPB1-207ENST00000558335 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
GABPB1-207ENST00000558335 SPINK6Q6UWN8 80 aa3.2□□□□□ -1.9
GABPB1-207ENST00000558335 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
GABPB1-207ENST00000558335 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
GABPB1-207ENST00000558335 SPINK1P00995 79 aa3.19□□□□□ -1.9
GABPB1-207ENST00000558335 NBEAL1Q6ZS30 2694 aa3.19□□□□□ -1.9
GABPB1-207ENST00000558335 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
GABPB1-207ENST00000558335 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
GABPB1-207ENST00000558335 ANK2Q01484 3957 aa3.18□□□□□ -1.9
GABPB1-207ENST00000558335 LY6G6CO95867 125 aa3.17□□□□□ -1.9
GABPB1-207ENST00000558335 IGKV2-30P06310 120 aa3.17□□□□□ -1.9
GABPB1-207ENST00000558335 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
GABPB1-207ENST00000558335 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
GABPB1-207ENST00000558335 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
GABPB1-207ENST00000558335 Q6ZSA8 131 aa3.15□□□□□ -1.91
GABPB1-207ENST00000558335 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.91
GABPB1-207ENST00000558335 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
GABPB1-207ENST00000558335 COL6A5A8TX70 2615 aa3.14□□□□□ -1.91
GABPB1-207ENST00000558335 DNAH9Q9NYC9 4486 aa3.13□□□□□ -1.91
GABPB1-207ENST00000558335 TENM2Q9NT68 2774 aa3.13□□□□□ -1.91
GABPB1-207ENST00000558335 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
GABPB1-207ENST00000558335 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
GABPB1-207ENST00000558335 STAB2Q8WWQ8 2551 aa3.12□□□□□ -1.91
GABPB1-207ENST00000558335 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
GABPB1-207ENST00000558335 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
GABPB1-207ENST00000558335 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
GABPB1-207ENST00000558335 VPS13DQ5THJ4 4388 aa3.1□□□□□ -1.91
GABPB1-207ENST00000558335 MGAM2Q2M2H8 2515 aa3.1□□□□□ -1.91
GABPB1-207ENST00000558335 DNAH10Q8IVF4 4471 aa3.09□□□□□ -1.91
GABPB1-207ENST00000558335 KRTAP13-2Q52LG2 175 aa3.09□□□□□ -1.91
GABPB1-207ENST00000558335 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.91
GABPB1-207ENST00000558335 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
GABPB1-207ENST00000558335 DNAH17Q9UFH2 4485 aa3.08□□□□□ -1.92
GABPB1-207ENST00000558335 PLECQ15149 4684 aaKnown RBP3.08□□□□□ -1.92
GABPB1-207ENST00000558335 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 KRTAP10-2P60368 255 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 KRTAP21-3Q3LHN1 58 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 LYSTQ99698 3801 aa3.06□□□□□ -1.92
GABPB1-207ENST00000558335 DNAH6Q9C0G6 4158 aa3.05□□□□□ -1.92
GABPB1-207ENST00000558335 A0A1B0GU33 70 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 700.2 ms