RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 IGKV3D-7A0A0C4DH55 119 aa9.17□□□□□ -0.94
PCNX4-213ENST00000556907 DSCR10P59022 87 aa9.17□□□□□ -0.94
PCNX4-213ENST00000556907 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
PCNX4-213ENST00000556907 A8MWP4 228 aa9.15□□□□□ -0.94
PCNX4-213ENST00000556907 MT-ATP8P03928 68 aa9.14□□□□□ -0.95
PCNX4-213ENST00000556907 LPAP08519 4548 aa9.13□□□□□ -0.95
PCNX4-213ENST00000556907 KRTAP13-3Q3SY46 172 aa9.13□□□□□ -0.95
PCNX4-213ENST00000556907 K7EQZ3 153 aa9.11□□□□□ -0.95
PCNX4-213ENST00000556907 A0A1B0GVX0 72 aa9.1□□□□□ -0.95
PCNX4-213ENST00000556907 NDUFB1O75438 58 aa9.1□□□□□ -0.95
PCNX4-213ENST00000556907 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
PCNX4-213ENST00000556907 Q8N9L7 120 aa9.09□□□□□ -0.95
PCNX4-213ENST00000556907 IMUPQ9GZP8 106 aa9.09□□□□□ -0.95
PCNX4-213ENST00000556907 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
PCNX4-213ENST00000556907 HIST1H4AP62805 103 aaKnown RBP9.05□□□□□ -0.96
PCNX4-213ENST00000556907 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
PCNX4-213ENST00000556907 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.97
PCNX4-213ENST00000556907 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
PCNX4-213ENST00000556907 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
PCNX4-213ENST00000556907 A0A087WVE0 104 aa9.01□□□□□ -0.97
PCNX4-213ENST00000556907 HCG22E2RYF7 251 aa9□□□□□ -0.97
PCNX4-213ENST00000556907 XP32Q5T750 250 aa8.99□□□□□ -0.97
PCNX4-213ENST00000556907 C9orf92A6NGG3 77 aa8.97□□□□□ -0.97
PCNX4-213ENST00000556907 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
PCNX4-213ENST00000556907 LINC00313P59037 77 aa8.96□□□□□ -0.98
PCNX4-213ENST00000556907 SEC61BP60468 96 aaKnown RBP8.95□□□□□ -0.98
PCNX4-213ENST00000556907 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
PCNX4-213ENST00000556907 hDV103S1A0JD37 113 aa8.94□□□□□ -0.98
PCNX4-213ENST00000556907 KRTAP16-1A8MUX0 517 aa8.94□□□□□ -0.98
PCNX4-213ENST00000556907 CASC2Q6XLA1 102 aa8.94□□□□□ -0.98
PCNX4-213ENST00000556907 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
PCNX4-213ENST00000556907 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
PCNX4-213ENST00000556907 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
PCNX4-213ENST00000556907 MRPL34Q9BQ48 92 aaKnown RBP8.9□□□□□ -0.98
PCNX4-213ENST00000556907 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
PCNX4-213ENST00000556907 SCGB1A1P11684 91 aa8.86□□□□□ -0.99
PCNX4-213ENST00000556907 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
PCNX4-213ENST00000556907 Q8N9P0 234 aaPredicted RBP8.85□□□□□ -0.99
PCNX4-213ENST00000556907 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
PCNX4-213ENST00000556907 Q75L30 129 aa8.83□□□□□ -1
PCNX4-213ENST00000556907 RNF213Q63HN8 5207 aa8.82□□□□□ -1
PCNX4-213ENST00000556907 A8MUU9 505 aa8.82□□□□□ -1
PCNX4-213ENST00000556907 ATOX1O00244 68 aa8.82□□□□□ -1
PCNX4-213ENST00000556907 OCR1Q9BZK8 76 aa8.79□□□□□ -1
PCNX4-213ENST00000556907 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
PCNX4-213ENST00000556907 NDUFS5O43920 106 aa8.77□□□□□ -1.01
PCNX4-213ENST00000556907 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
PCNX4-213ENST00000556907 ATP11AUNQ6ZP68 121 aa8.77□□□□□ -1.01
PCNX4-213ENST00000556907 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1.01
PCNX4-213ENST00000556907 A0A0U1RQV1 116 aa8.74□□□□□ -1.01
PCNX4-213ENST00000556907 TRAV7A0A075B6U4 112 aa8.73□□□□□ -1.01
PCNX4-213ENST00000556907 UQCRQO14949 82 aa8.73□□□□□ -1.01
PCNX4-213ENST00000556907 MUC2Q02817 5179 aa8.72□□□□□ -1.01
PCNX4-213ENST00000556907 ZCCHC13Q8WW36 166 aaKnown RBP8.69□□□□□ -1.02
PCNX4-213ENST00000556907 TRAV22A0A0B4J277 110 aa8.68□□□□□ -1.02
PCNX4-213ENST00000556907 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
PCNX4-213ENST00000556907 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
PCNX4-213ENST00000556907 Q5W150 140 aa8.65□□□□□ -1.02
PCNX4-213ENST00000556907 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
PCNX4-213ENST00000556907 H0Y9P7 68 aa8.63□□□□□ -1.03
PCNX4-213ENST00000556907 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
PCNX4-213ENST00000556907 COX7CP15954 63 aa8.61□□□□□ -1.03
PCNX4-213ENST00000556907 H3BPC8 53 aa8.59□□□□□ -1.03
PCNX4-213ENST00000556907 MP68P56378 58 aa8.59□□□□□ -1.03
PCNX4-213ENST00000556907 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
PCNX4-213ENST00000556907 IGKV2-30P06310 120 aa8.54□□□□□ -1.04
PCNX4-213ENST00000556907 LINC00208Q96KT6 92 aa8.53□□□□□ -1.04
PCNX4-213ENST00000556907 C7orf65Q6ZTY9 151 aa8.52□□□□□ -1.05
PCNX4-213ENST00000556907 C20orf197Q8N268 126 aa8.51□□□□□ -1.05
PCNX4-213ENST00000556907 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
PCNX4-213ENST00000556907 KLKP1Q107X0 134 aa8.5□□□□□ -1.05
PCNX4-213ENST00000556907 FAT4Q6V0I7 4981 aa8.49□□□□□ -1.05
PCNX4-213ENST00000556907 IGKV2D-30A0A075B6S6 120 aa8.48□□□□□ -1.05
PCNX4-213ENST00000556907 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
PCNX4-213ENST00000556907 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
PCNX4-213ENST00000556907 SPINK7P58062 85 aa8.45□□□□□ -1.06
PCNX4-213ENST00000556907 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
PCNX4-213ENST00000556907 PCP4P48539 62 aa8.43□□□□□ -1.06
PCNX4-213ENST00000556907 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
PCNX4-213ENST00000556907 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
PCNX4-213ENST00000556907 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
PCNX4-213ENST00000556907 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
PCNX4-213ENST00000556907 NDUFC1O43677 76 aa8.38□□□□□ -1.07
PCNX4-213ENST00000556907 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
PCNX4-213ENST00000556907 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
PCNX4-213ENST00000556907 HRES1P13985 223 aa8.36□□□□□ -1.07
PCNX4-213ENST00000556907 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
PCNX4-213ENST00000556907 H7BZZ5 65 aa8.33□□□□□ -1.08
PCNX4-213ENST00000556907 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
PCNX4-213ENST00000556907 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
PCNX4-213ENST00000556907 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
PCNX4-213ENST00000556907 MT1HP80294 61 aa8.28□□□□□ -1.08
PCNX4-213ENST00000556907 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
PCNX4-213ENST00000556907 TMEM258P61165 79 aa8.22□□□□□ -1.09
PCNX4-213ENST00000556907 FLGP20930 4061 aaPredicted RBP8.22□□□□□ -1.09
PCNX4-213ENST00000556907 M0R2T5 61 aa8.2□□□□□ -1.1
PCNX4-213ENST00000556907 DMAC1Q96GE9 116 aa8.2□□□□□ -1.1
PCNX4-213ENST00000556907 A8MUN3 132 aa8.19□□□□□ -1.1
PCNX4-213ENST00000556907 ATP5EP56381 51 aaPredicted RBP8.19□□□□□ -1.1
PCNX4-213ENST00000556907 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms