RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	PTPRZ1	P23471	2315 aa	Predicted RBP	2.78	□□□□□ -1.96
RALGAPA1-215	ENST00000556839	SPINK13	Q1W4C9	94 aa		2.78	□□□□□ -1.96
RALGAPA1-215	ENST00000556839	ITPR3	Q14573	2671 aa		2.78	□□□□□ -1.96
RALGAPA1-215	ENST00000556839	AKAP9	Q99996	3911 aa		2.78	□□□□□ -1.96
RALGAPA1-215	ENST00000556839	DOPEY2	Q9Y3R5	2298 aa		2.78	□□□□□ -1.96
RALGAPA1-215	ENST00000556839	PCNX1	Q96RV3	2341 aa		2.78	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	ABCA12	Q86UK0	2595 aa		2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839		H0YAA0	97 aa		2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	BRD3OS	Q6XYD6	125 aa		2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839		Q6ZRX8	168 aa		2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	VPS13C	Q709C8	3753 aa		2.77	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	SPTBN2	O15020	2390 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	INE1	O15225	51 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	COX6B2	Q6YFQ2	88 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	ACACB	O00763	2458 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	CELSR1	Q9NYQ6	3014 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	LRBA	P50851	2863 aa		2.76	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	MRPL34	Q9BQ48	92 aa	Known RBP	2.75	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	HELZ2	Q9BYK8	2649 aa	Known RBP	2.75	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	CEP295	Q9C0D2	2601 aa		2.75	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	HECTD1	Q9ULT8	2610 aa		2.75	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	C10orf99	Q6UWK7	81 aa		2.74	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	PLAC4	Q8WY50	150 aa		2.74	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	SPTA1	P02549	2419 aa		2.74	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	RIF1	Q5UIP0	2472 aa	Known RBP	2.73	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	HIVEP3	Q5T1R4	2406 aa		2.73	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	DNAH1	Q9P2D7	4330 aa		2.73	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	CLPSL2	Q6UWE3	100 aa		2.72	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	CRIPT	Q9P021	101 aa		2.72	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	C2CD3	Q4AC94	2353 aa		2.72	□□□□□ -1.97
RALGAPA1-215	ENST00000556839	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.72	□□□□□ -1.97	1e-10	■■■■■ 29.5
RALGAPA1-215	ENST00000556839	NBPF19	A0A087WUL8	3843 aa		2.71	□□□□□ -1.98
RALGAPA1-215	ENST00000556839		Q6ZSA8	131 aa		2.71	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	SPTBN1	Q01082	2364 aa	Known RBP	2.71	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	SPTAN1	Q13813	2472 aa	Known RBP	2.7	□□□□□ -1.98
RALGAPA1-215	ENST00000556839		Q6ZRN7	208 aa	Predicted RBP	2.69	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	COL6A6	A6NMZ7	2263 aa		2.69	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	FBN2	P35556	2912 aa		2.69	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	ITPR1	Q14643	2758 aa		2.69	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	IGF2R	P11717	2491 aa		2.69	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	MYO9A	B2RTY4	2548 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	COL12A1	Q99715	3063 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	DNHD1	Q96M86	4753 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	NCOR2	Q9Y618	2525 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	CREBBP	Q92793	2442 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	AKAP6	Q13023	2319 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	H1FX-AS1	Q4G0G2	97 aa		2.68	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	DEFB136	Q30KP8	78 aa		2.67	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	IGFL1	Q6UW32	110 aa		2.67	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	CFAP46	Q8IYW2	2715 aa		2.67	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	CELSR2	Q9HCU4	2923 aa		2.66	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	SETD2	Q9BYW2	2564 aa	Predicted RBP	2.66	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	SPRR1A	P35321	89 aa		2.66	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	MXRA5	Q9NR99	2828 aa		2.65	□□□□□ -1.98
RALGAPA1-215	ENST00000556839	NBAS	A2RRP1	2371 aa		2.65	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	KRTAP10-10	P60014	251 aa		2.65	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	DEFB105A	Q8NG35	78 aa		2.65	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	NOP10	Q9NPE3	64 aa	Known RBP	2.65	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	ZNF469	Q96JG9	3925 aa	Predicted RBP	2.64	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	HTN1	P15515	57 aa		2.64	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	PRO0255	Q9UI72	69 aa		2.64	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	CSPG4	Q6UVK1	2322 aa		2.63	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	TEX15	Q9BXT5	2789 aa		2.63	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	RPL37	P61927	97 aa	Known RBP	2.63	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	UBR5	O95071	2799 aa	Predicted RBP	2.63	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	ZFYVE26	Q68DK2	2539 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	CSMD2	Q7Z408	3487 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	ZAN	Q9Y493	2812 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	CRYBG3	Q68DQ2	2970 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	USP9Y	O00507	2555 aa	Predicted RBP	2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	DNAH3	Q8TD57	4116 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	KRTAP13-2	Q52LG2	175 aa		2.62	□□□□□ -1.99
RALGAPA1-215	ENST00000556839		H3BNG1	76 aa		2.61	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	DEFB130B	P0DP73	79 aa		2.61	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	DEFB130A	P0DP74	79 aa		2.61	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.61	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	SPG11	Q96JI7	2443 aa		2.6	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	LELP1	Q5T871	98 aa		2.6	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	FLNC	Q14315	2725 aa		2.6	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	DYNC2H1	Q8NCM8	4307 aa	Known RBP	2.6	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	POLQ	O75417	2590 aa		2.59	□□□□□ -1.99
RALGAPA1-215	ENST00000556839	SPRR1B	P22528	89 aa		2.59	□□□□□ -2
RALGAPA1-215	ENST00000556839	C10orf95	Q9H7T3	257 aa		2.59	□□□□□ -2
RALGAPA1-215	ENST00000556839	WNK1	Q9H4A3	2382 aa		2.59	□□□□□ -2
RALGAPA1-215	ENST00000556839	TENM4	Q6N022	2769 aa		2.58	□□□□□ -2
RALGAPA1-215	ENST00000556839	IGSF10	Q6WRI0	2623 aa		2.58	□□□□□ -2
RALGAPA1-215	ENST00000556839	UBE2DNL	Q8IWF7	75 aa		2.58	□□□□□ -2
RALGAPA1-215	ENST00000556839	MAP1A	P78559	2803 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-215	ENST00000556839		K7EIL1	84 aa		2.57	□□□□□ -2
RALGAPA1-215	ENST00000556839	CMYA5	Q8N3K9	4069 aa		2.56	□□□□□ -2
RALGAPA1-215	ENST00000556839		A0A096LPF7	62 aa		2.56	□□□□□ -2
RALGAPA1-215	ENST00000556839	KRTAP21-2	Q3LI59	83 aa		2.56	□□□□□ -2
RALGAPA1-215	ENST00000556839	CUBN	O60494	3623 aa		2.56	□□□□□ -2
RALGAPA1-215	ENST00000556839	HUWE1	Q7Z6Z7	4374 aa	Known RBP	2.55	□□□□□ -2
RALGAPA1-215	ENST00000556839	UTP20	O75691	2785 aa	Known RBP	2.55	□□□□□ -2
RALGAPA1-215	ENST00000556839	APC	P25054	2843 aa		2.55	□□□□□ -2
RALGAPA1-215	ENST00000556839	TLN2	Q9Y4G6	2542 aa		2.55	□□□□□ -2
RALGAPA1-215	ENST00000556839	NIPBL	Q6KC79	2804 aa	eCLIP	2.54	□□□□□ -2
RALGAPA1-215	ENST00000556839	ANK2	Q01484	3957 aa		2.54	□□□□□ -2

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