RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TRBV7-7A0A0K0K1E9 115 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 TEX49A0A1B0GTD5 131 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 C20orf202A1L168 122 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 F8WEM9 126 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 LEPROTL1O95214 131 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 NDUFC2O95298 119 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 TRGC2P03986 189 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 HINT1P49773 126 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-219ENST00000556413 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 KRTAP19-6Q3LI70 58 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 CLLU1Q5K131 121 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 SFTA2Q6UW10 78 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 YPEL4Q96NS1 127 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 SIGMAR1Q99720 223 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 SPANXDQ9BXN6 97 aa1.08□□□□□ -2.24
SCFD1-219ENST00000556413 IGLV5-48A0A075B6I7 105 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 TRBV20-1A0A075B6N2 111 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 LOC107984156A0A0G2JMH3 177 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 LINC01549A6NIU2 74 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 TCL1BO95988 128 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 PLNP26678 52 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 CD164Q04900 197 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 Q6ZQY7 126 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 MUSTN1Q8IVN3 82 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 ARL17AQ8IVW1 177 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 SMIM11BQ8TCY0 68 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 CLEC2BQ92478 149 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
SCFD1-219ENST00000556413 SPANXCQ9NY87 97 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 HSPB8Q9UJY1 196 aa1.07□□□□□ -2.24
SCFD1-219ENST00000556413 A0A087WSZ3 146 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 LINC00587B1AMM8 73 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 H3BQ85 93 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 LST1O00453 97 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 KRTDAPP60985 99 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 RBM3P98179 157 aaKnown RBP1.06□□□□□ -2.24
SCFD1-219ENST00000556413 SCGB1D4Q6XE38 83 aa1.06□□□□□ -2.24
SCFD1-219ENST00000556413 IGHV6-1A0A0B4J1U7 121 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 SYS1-DBNDD2H3BUS1 97 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 KRTAP12-1P59990 96 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 OCIAD2Q56VL3 154 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 C10orf91Q5T1B1 145 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 Q5XG85 94 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-219ENST00000556413 LINC00575Q6W349 94 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 WFDC13Q8IUB5 93 aa1.05□□□□□ -2.24
SCFD1-219ENST00000556413 hADV29S1A0JD25 119 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 TIMM17BO60830 172 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 C3orf79P0CE67 100 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 PSMB2P49721 201 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 KRTAP25-1Q3LHN0 102 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 LINC01545Q5VT33 79 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 SVBPQ8N300 66 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 SNHG12Q9BXW3 62 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 NHP2Q9NX24 153 aaKnown RBP1.04□□□□□ -2.24
SCFD1-219ENST00000556413 RBM12B-AS1Q9P1G2 102 aa1.04□□□□□ -2.24
SCFD1-219ENST00000556413 TRAV13-2A0A0B4J235 113 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 A0A1W2PNM2 257 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 A6NN06 94 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 NDUFS5O43920 106 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BKO60814 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BJP06899 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 FABP2P12104 132 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BOP23527 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BBP33778 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BDP58876 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BCP62807 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 NDUFA5Q16718 116 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST2H2BEQ16778 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-219ENST00000556413 Q6JHZ5 121 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BHQ93079 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BNQ99877 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 HIST1H2BMQ99879 126 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 VPS25Q9BRG1 176 aa1.03□□□□□ -2.24
SCFD1-219ENST00000556413 A0A0B4J2C4 111 aa1.02□□□□□ -2.25
SCFD1-219ENST00000556413 TRBV7-6A0A0J9YX20 115 aa1.02□□□□□ -2.25
SCFD1-219ENST00000556413 MT1BP07438 61 aa1.02□□□□□ -2.25
SCFD1-219ENST00000556413 SPINK7P58062 85 aa1.02□□□□□ -2.25
SCFD1-219ENST00000556413 LINC00313P59037 77 aa1.02□□□□□ -2.25
SCFD1-219ENST00000556413 FAM236AA0A1B0GUQ0 79 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 FAM236BA0A1B0GV22 79 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 A8MWP4 228 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 H3BMG7 143 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 K7ERJ3 54 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 SPRR2EP22531 72 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 SPRR2BP35325 72 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 SPRR2AP35326 72 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 VAMP3Q15836 100 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 LYRM7Q5U5X0 104 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 LINC00846Q9NV44 126 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 SS18L2Q9UHA2 77 aa1.01□□□□□ -2.25
SCFD1-219ENST00000556413 K7ERS5 55 aa1□□□□□ -2.25
SCFD1-219ENST00000556413 IFITM1P13164 125 aa1□□□□□ -2.25
SCFD1-219ENST00000556413 TEN1Q86WV5 123 aa1□□□□□ -2.25
SCFD1-219ENST00000556413 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
SCFD1-219ENST00000556413 PRO0628Q9UI54 55 aa1□□□□□ -2.25
SCFD1-219ENST00000556413 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
SCFD1-219ENST00000556413 TRACP01848 142 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms