RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
SLIRP-204ENST00000555890 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
SLIRP-204ENST00000555890 SPRR1BP22528 89 aa4.17□□□□□ -1.74
SLIRP-204ENST00000555890 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
SLIRP-204ENST00000555890 ZNF706Q9Y5V0 76 aaPredicted RBP4.17□□□□□ -1.74
SLIRP-204ENST00000555890 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
SLIRP-204ENST00000555890 KRTAP13-1Q8IUC0 172 aa4.16□□□□□ -1.74
SLIRP-204ENST00000555890 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
SLIRP-204ENST00000555890 IGKV3D-7A0A0C4DH55 119 aa4.15□□□□□ -1.75
SLIRP-204ENST00000555890 PSORS1C2Q9UIG4 136 aa4.15□□□□□ -1.75
SLIRP-204ENST00000555890 IGLV8-61A0A075B6I0 122 aa4.14□□□□□ -1.75
SLIRP-204ENST00000555890 ZNF861PO60384 105 aa4.14□□□□□ -1.75
SLIRP-204ENST00000555890 HAMPP81172 84 aa4.14□□□□□ -1.75
SLIRP-204ENST00000555890 NREPQ16612 68 aa4.14□□□□□ -1.75
SLIRP-204ENST00000555890 Q8NBF4 154 aa4.14□□□□□ -1.75
SLIRP-204ENST00000555890 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
SLIRP-204ENST00000555890 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
SLIRP-204ENST00000555890 SPRR4Q96PI1 79 aa4.13□□□□□ -1.75
SLIRP-204ENST00000555890 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
SLIRP-204ENST00000555890 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
SLIRP-204ENST00000555890 CXCL6P80162 114 aa4.12□□□□□ -1.75
SLIRP-204ENST00000555890 Q6ZSA8 131 aa4.12□□□□□ -1.75
SLIRP-204ENST00000555890 SCXQ7RTU7 201 aa4.12□□□□□ -1.75
SLIRP-204ENST00000555890 LPAP08519 4548 aa4.11□□□□□ -1.75
SLIRP-204ENST00000555890 CRYGAP11844 174 aa4.11□□□□□ -1.75
SLIRP-204ENST00000555890 LINC00483Q53H64 154 aa4.11□□□□□ -1.75
SLIRP-204ENST00000555890 IGFL1Q6UW32 110 aa4.11□□□□□ -1.75
SLIRP-204ENST00000555890 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
SLIRP-204ENST00000555890 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
SLIRP-204ENST00000555890 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
SLIRP-204ENST00000555890 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
SLIRP-204ENST00000555890 RPL37AP61513 92 aaKnown RBP4.1□□□□□ -1.75
SLIRP-204ENST00000555890 ANAPC13Q9BS18 74 aa4.1□□□□□ -1.75
SLIRP-204ENST00000555890 USH2AO75445 5202 aa4.1□□□□□ -1.75
SLIRP-204ENST00000555890 BPY2O14599 106 aa4.09□□□□□ -1.75
SLIRP-204ENST00000555890 C9orf153Q5TBE3 101 aa4.09□□□□□ -1.75
SLIRP-204ENST00000555890 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
SLIRP-204ENST00000555890 ATOX1O00244 68 aa4.08□□□□□ -1.76
SLIRP-204ENST00000555890 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 A0A087WSZ3 146 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 A0A087WVE0 104 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 A0A087X002 238 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 A0A0G2JQZ4 141 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
SLIRP-204ENST00000555890 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
SLIRP-204ENST00000555890 MOBPQ13875 183 aa4.04□□□□□ -1.76
SLIRP-204ENST00000555890 SSBP3-AS1Q7Z2R9 100 aa4.04□□□□□ -1.76
SLIRP-204ENST00000555890 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
SLIRP-204ENST00000555890 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
SLIRP-204ENST00000555890 SS18L2Q9UHA2 77 aa4.04□□□□□ -1.76
SLIRP-204ENST00000555890 IGLV7-46A0A075B6I9 117 aa4.03□□□□□ -1.76
SLIRP-204ENST00000555890 J3KT08 172 aa4.03□□□□□ -1.76
SLIRP-204ENST00000555890 FAM229BQ4G0N7 80 aa4.03□□□□□ -1.76
SLIRP-204ENST00000555890 ANAPC11Q9NYG5 84 aa4.03□□□□□ -1.76
SLIRP-204ENST00000555890 IGKV4-1P06312 121 aa4.02□□□□□ -1.77
SLIRP-204ENST00000555890 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
SLIRP-204ENST00000555890 UQCRQO14949 82 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 COX7CP15954 63 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 DSCR10P59022 87 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 CD164Q04900 197 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 HRCT1Q6UXD1 115 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 Q8N9L7 120 aa4.01□□□□□ -1.77
SLIRP-204ENST00000555890 NDUFB1O75438 58 aa4□□□□□ -1.77
SLIRP-204ENST00000555890 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
SLIRP-204ENST00000555890 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
SLIRP-204ENST00000555890 CCDC179H3BU77 68 aa3.99□□□□□ -1.77
SLIRP-204ENST00000555890 DEFB116Q30KQ4 102 aa3.99□□□□□ -1.77
SLIRP-204ENST00000555890 A8MWP4 228 aa3.98□□□□□ -1.77
SLIRP-204ENST00000555890 K7EQZ3 153 aa3.98□□□□□ -1.77
SLIRP-204ENST00000555890 HCG22E2RYF7 251 aa3.97□□□□□ -1.77
SLIRP-204ENST00000555890 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
SLIRP-204ENST00000555890 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
SLIRP-204ENST00000555890 KRTAP13-2Q52LG2 175 aa3.96□□□□□ -1.78
SLIRP-204ENST00000555890 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
SLIRP-204ENST00000555890 TYMSOSQ8TAI1 123 aa3.95□□□□□ -1.78
SLIRP-204ENST00000555890 Q96NJ1 140 aa3.95□□□□□ -1.78
SLIRP-204ENST00000555890 Q5XG85 94 aa3.94□□□□□ -1.78
SLIRP-204ENST00000555890 CASC2Q6XLA1 102 aa3.94□□□□□ -1.78
SLIRP-204ENST00000555890 LIMD2Q9BT23 127 aa3.94□□□□□ -1.78
SLIRP-204ENST00000555890 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
SLIRP-204ENST00000555890 WFDC13Q8IUB5 93 aa3.93□□□□□ -1.78
SLIRP-204ENST00000555890 KMT2DO14686 5537 aa3.92□□□□□ -1.78
SLIRP-204ENST00000555890 SPINK1P00995 79 aa3.92□□□□□ -1.78
SLIRP-204ENST00000555890 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
SLIRP-204ENST00000555890 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
SLIRP-204ENST00000555890 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
SLIRP-204ENST00000555890 IGHV6-1A0A0B4J1U7 121 aa3.91□□□□□ -1.78
SLIRP-204ENST00000555890 C8orf17Q9NRJ1 99 aa3.91□□□□□ -1.78
SLIRP-204ENST00000555890 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
SLIRP-204ENST00000555890 hDV103S1A0JD37 113 aa3.9□□□□□ -1.79
SLIRP-204ENST00000555890 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
SLIRP-204ENST00000555890 LINC00304Q8N9R0 145 aa3.9□□□□□ -1.79
SLIRP-204ENST00000555890 C8orf87E5RJ46 101 aa3.89□□□□□ -1.79
SLIRP-204ENST00000555890 NDUFC1O43677 76 aa3.89□□□□□ -1.79
SLIRP-204ENST00000555890 RPS29P62273 56 aaKnown RBP3.89□□□□□ -1.79
SLIRP-204ENST00000555890 KLKP1Q107X0 134 aa3.89□□□□□ -1.79
SLIRP-204ENST00000555890 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
SLIRP-204ENST00000555890 MP68P56378 58 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms