RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 MOBPQ13875 183 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 LINC00483Q53H64 154 aa4.26□□□□□ -1.73
TDP1-213ENST00000555880 RTL8CO15255 209 aa4.25□□□□□ -1.73
TDP1-213ENST00000555880 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
TDP1-213ENST00000555880 V9GYY9 64 aa4.25□□□□□ -1.73
TDP1-213ENST00000555880 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
TDP1-213ENST00000555880 CSMD3Q7Z407 3707 aa4.24□□□□□ -1.73
TDP1-213ENST00000555880 IGLV5-52A0A0A0MRZ9 124 aa4.24□□□□□ -1.73
TDP1-213ENST00000555880 Q96NJ1 140 aa4.23□□□□□ -1.73
TDP1-213ENST00000555880 PSORS1C2Q9UIG4 136 aa4.23□□□□□ -1.73
TDP1-213ENST00000555880 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 PLAC8Q9NZF1 115 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 DNAH7Q8WXX0 4024 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 NDUFS5O43920 106 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 ZNF861PO60384 105 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 WWC2-AS2Q96NR7 200 aa4.22□□□□□ -1.73
TDP1-213ENST00000555880 TGP01266 2768 aa4.21□□□□□ -1.74
TDP1-213ENST00000555880 PSPHP1O15172 72 aa4.2□□□□□ -1.74
TDP1-213ENST00000555880 ASB16-AS1Q495Z4 193 aa4.2□□□□□ -1.74
TDP1-213ENST00000555880 LY6G6CO95867 125 aa4.2□□□□□ -1.74
TDP1-213ENST00000555880 Q6ZR54 194 aa4.2□□□□□ -1.74
TDP1-213ENST00000555880 C1orf134Q5TEV5 83 aa4.19□□□□□ -1.74
TDP1-213ENST00000555880 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
TDP1-213ENST00000555880 IGLV7-46A0A075B6I9 117 aa4.18□□□□□ -1.74
TDP1-213ENST00000555880 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
TDP1-213ENST00000555880 LIMD2Q9BT23 127 aa4.18□□□□□ -1.74
TDP1-213ENST00000555880 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
TDP1-213ENST00000555880 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
TDP1-213ENST00000555880 Q8N1X5 172 aa4.18□□□□□ -1.74
TDP1-213ENST00000555880 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
TDP1-213ENST00000555880 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
TDP1-213ENST00000555880 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
TDP1-213ENST00000555880 COA5Q86WW8 74 aa4.17□□□□□ -1.74
TDP1-213ENST00000555880 A8MUN3 132 aa4.16□□□□□ -1.74
TDP1-213ENST00000555880 CD164Q04900 197 aa4.15□□□□□ -1.74
TDP1-213ENST00000555880 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.74
TDP1-213ENST00000555880 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
TDP1-213ENST00000555880 PRKDCP78527 4128 aaKnown RBP4.15□□□□□ -1.75
TDP1-213ENST00000555880 SPINK6Q6UWN8 80 aa4.15□□□□□ -1.75
TDP1-213ENST00000555880 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
TDP1-213ENST00000555880 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
TDP1-213ENST00000555880 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
TDP1-213ENST00000555880 HECTD4Q9Y4D8 3996 aa4.14□□□□□ -1.75
TDP1-213ENST00000555880 SSBP3-AS1Q7Z2R9 100 aa4.13□□□□□ -1.75
TDP1-213ENST00000555880 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
TDP1-213ENST00000555880 Q5VV11 94 aa4.13□□□□□ -1.75
TDP1-213ENST00000555880 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
TDP1-213ENST00000555880 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
TDP1-213ENST00000555880 A0A087X002 238 aa4.11□□□□□ -1.75
TDP1-213ENST00000555880 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
TDP1-213ENST00000555880 Q75L30 129 aa4.1□□□□□ -1.75
TDP1-213ENST00000555880 A6NED7 52 aa4.09□□□□□ -1.76
TDP1-213ENST00000555880 SPAG11AQ6PDA7 123 aa4.09□□□□□ -1.76
TDP1-213ENST00000555880 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
TDP1-213ENST00000555880 HRES1P13985 223 aa4.08□□□□□ -1.76
TDP1-213ENST00000555880 LINC00313P59037 77 aa4.08□□□□□ -1.76
TDP1-213ENST00000555880 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
TDP1-213ENST00000555880 Q5W150 140 aa4.07□□□□□ -1.76
TDP1-213ENST00000555880 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
TDP1-213ENST00000555880 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
TDP1-213ENST00000555880 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
TDP1-213ENST00000555880 ACYP2P14621 99 aa4.05□□□□□ -1.76
TDP1-213ENST00000555880 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
TDP1-213ENST00000555880 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
TDP1-213ENST00000555880 Q6ZSA8 131 aa4.04□□□□□ -1.76
TDP1-213ENST00000555880 KRTAP13-2Q52LG2 175 aa4.03□□□□□ -1.76
TDP1-213ENST00000555880 ATP11AUNQ6ZP68 121 aa4.03□□□□□ -1.76
TDP1-213ENST00000555880 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
TDP1-213ENST00000555880 FRAS1Q86XX4 4008 aa4.03□□□□□ -1.76
TDP1-213ENST00000555880 KRTAP10-1P60331 282 aa4.03□□□□□ -1.77
TDP1-213ENST00000555880 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.77
TDP1-213ENST00000555880 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
TDP1-213ENST00000555880 ALMS1Q8TCU4 4167 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 A8MU10 97 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 LCA10Q71F78 164 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 IGKV2-30P06310 120 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
TDP1-213ENST00000555880 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
TDP1-213ENST00000555880 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
TDP1-213ENST00000555880 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
TDP1-213ENST00000555880 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
TDP1-213ENST00000555880 SPINK1P00995 79 aa3.98□□□□□ -1.77
TDP1-213ENST00000555880 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
TDP1-213ENST00000555880 IGKV2D-30A0A075B6S6 120 aa3.97□□□□□ -1.77
TDP1-213ENST00000555880 SPINK7P58062 85 aa3.97□□□□□ -1.77
TDP1-213ENST00000555880 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
TDP1-213ENST00000555880 A0A1B0GU69 56 aa3.95□□□□□ -1.78
TDP1-213ENST00000555880 DNAH11Q96DT5 4516 aa3.95□□□□□ -1.78
TDP1-213ENST00000555880 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
TDP1-213ENST00000555880 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
TDP1-213ENST00000555880 A6NN06 94 aa3.94□□□□□ -1.78
TDP1-213ENST00000555880 PKD1P98161 4303 aa3.94□□□□□ -1.78
TDP1-213ENST00000555880 RPS29P62273 56 aaKnown RBP3.93□□□□□ -1.78
TDP1-213ENST00000555880 LINC00304Q8N9R0 145 aa3.93□□□□□ -1.78
TDP1-213ENST00000555880 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms