RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 C9JAW5 83 aa7.1□□□□□ -1.27
SNX6-203ENST00000555416 TAX1BP3O14907 124 aa7.1□□□□□ -1.27
SNX6-203ENST00000555416 LINC00313P59037 77 aa7.1□□□□□ -1.27
SNX6-203ENST00000555416 Q6ZQT0 140 aa7.1□□□□□ -1.27
SNX6-203ENST00000555416 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
SNX6-203ENST00000555416 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
SNX6-203ENST00000555416 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
SNX6-203ENST00000555416 C14orf132Q9NPU4 83 aa7.07□□□□□ -1.28
SNX6-203ENST00000555416 TRBV20-1A0A075B6N2 111 aa7.06□□□□□ -1.28
SNX6-203ENST00000555416 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
SNX6-203ENST00000555416 LYRM7Q5U5X0 104 aa7.06□□□□□ -1.28
SNX6-203ENST00000555416 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
SNX6-203ENST00000555416 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
SNX6-203ENST00000555416 MTURNQ8N3F0 131 aa7.05□□□□□ -1.28
SNX6-203ENST00000555416 A0A1B0GVX0 72 aa7.04□□□□□ -1.28
SNX6-203ENST00000555416 A0A1W2PPM0 123 aa7.04□□□□□ -1.28
SNX6-203ENST00000555416 COX6B2Q6YFQ2 88 aa7.04□□□□□ -1.28
SNX6-203ENST00000555416 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
SNX6-203ENST00000555416 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
SNX6-203ENST00000555416 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
SNX6-203ENST00000555416 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
SNX6-203ENST00000555416 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
SNX6-203ENST00000555416 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
SNX6-203ENST00000555416 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
SNX6-203ENST00000555416 J3KT08 172 aa6.98□□□□□ -1.29
SNX6-203ENST00000555416 PDE6GP18545 87 aa6.98□□□□□ -1.29
SNX6-203ENST00000555416 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
SNX6-203ENST00000555416 SVIPQ8NHG7 77 aa6.98□□□□□ -1.29
SNX6-203ENST00000555416 H3BT86 120 aa6.97□□□□□ -1.29
SNX6-203ENST00000555416 IGKV3D-7A0A0C4DH55 119 aa6.96□□□□□ -1.3
SNX6-203ENST00000555416 A0A1B0GW54 56 aa6.96□□□□□ -1.3
SNX6-203ENST00000555416 M0R2T5 61 aa6.96□□□□□ -1.3
SNX6-203ENST00000555416 A8MWP4 228 aa6.94□□□□□ -1.3
SNX6-203ENST00000555416 SPCS1Q9Y6A9 102 aa6.94□□□□□ -1.3
SNX6-203ENST00000555416 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
SNX6-203ENST00000555416 NDUFB1O75438 58 aa6.92□□□□□ -1.3
SNX6-203ENST00000555416 HRES1P13985 223 aa6.92□□□□□ -1.3
SNX6-203ENST00000555416 NREPQ16612 68 aa6.92□□□□□ -1.3
SNX6-203ENST00000555416 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
SNX6-203ENST00000555416 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
SNX6-203ENST00000555416 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
SNX6-203ENST00000555416 PRR15Q8IV56 129 aa6.89□□□□□ -1.31
SNX6-203ENST00000555416 ZCCHC13Q8WW36 166 aaKnown RBP6.89□□□□□ -1.31
SNX6-203ENST00000555416 PRO0461Q9UI25 63 aa6.89□□□□□ -1.31
SNX6-203ENST00000555416 MMP24-AS1A0A0U1RRL7 71 aa6.86□□□□□ -1.31
SNX6-203ENST00000555416 K7EQZ3 153 aa6.86□□□□□ -1.31
SNX6-203ENST00000555416 Q6ZVQ6 151 aa6.86□□□□□ -1.31
SNX6-203ENST00000555416 K7EP34 96 aa6.84□□□□□ -1.31
SNX6-203ENST00000555416 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
SNX6-203ENST00000555416 H3BS24 57 aa6.83□□□□□ -1.32
SNX6-203ENST00000555416 SPINK7P58062 85 aa6.83□□□□□ -1.32
SNX6-203ENST00000555416 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
SNX6-203ENST00000555416 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
SNX6-203ENST00000555416 BPY2O14599 106 aa6.8□□□□□ -1.32
SNX6-203ENST00000555416 Q8N9L7 120 aa6.8□□□□□ -1.32
SNX6-203ENST00000555416 TMEM254Q8TBM7 123 aa6.8□□□□□ -1.32
SNX6-203ENST00000555416 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
SNX6-203ENST00000555416 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
SNX6-203ENST00000555416 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
SNX6-203ENST00000555416 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
SNX6-203ENST00000555416 LINC00846Q9NV44 126 aa6.78□□□□□ -1.32
SNX6-203ENST00000555416 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
SNX6-203ENST00000555416 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
SNX6-203ENST00000555416 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
SNX6-203ENST00000555416 Q5W150 140 aa6.73□□□□□ -1.33
SNX6-203ENST00000555416 WFDC13Q8IUB5 93 aa6.73□□□□□ -1.33
SNX6-203ENST00000555416 NDUFS5O43920 106 aa6.72□□□□□ -1.33
SNX6-203ENST00000555416 MT2AP02795 61 aa6.71□□□□□ -1.34
SNX6-203ENST00000555416 GTF2H5Q6ZYL4 71 aa6.71□□□□□ -1.34
SNX6-203ENST00000555416 ETDBQ3ZM63 59 aa6.7□□□□□ -1.34
SNX6-203ENST00000555416 CASC2Q6XLA1 102 aa6.69□□□□□ -1.34
SNX6-203ENST00000555416 F8W1H4 67 aa6.68□□□□□ -1.34
SNX6-203ENST00000555416 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
SNX6-203ENST00000555416 MT1FP04733 61 aa6.67□□□□□ -1.34
SNX6-203ENST00000555416 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SNX6-203ENST00000555416 IGKV2D-30A0A075B6S6 120 aa6.64□□□□□ -1.35
SNX6-203ENST00000555416 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
SNX6-203ENST00000555416 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
SNX6-203ENST00000555416 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
SNX6-203ENST00000555416 C7orf65Q6ZTY9 151 aa6.59□□□□□ -1.35
SNX6-203ENST00000555416 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
SNX6-203ENST00000555416 CXCL6P80162 114 aa6.58□□□□□ -1.36
SNX6-203ENST00000555416 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
SNX6-203ENST00000555416 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
SNX6-203ENST00000555416 USH2AO75445 5202 aa6.55□□□□□ -1.36
SNX6-203ENST00000555416 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
SNX6-203ENST00000555416 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
SNX6-203ENST00000555416 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
SNX6-203ENST00000555416 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SNX6-203ENST00000555416 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
SNX6-203ENST00000555416 A0A1B0GV90 55 aa6.48□□□□□ -1.37
SNX6-203ENST00000555416 ACYP1P07311 99 aa6.47□□□□□ -1.37
SNX6-203ENST00000555416 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
SNX6-203ENST00000555416 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
SNX6-203ENST00000555416 TP53AIP1Q9HCN2 124 aa6.45□□□□□ -1.38
SNX6-203ENST00000555416 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
SNX6-203ENST00000555416 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
SNX6-203ENST00000555416 ATP5EP2Q5VTU8 51 aa6.39□□□□□ -1.39
SNX6-203ENST00000555416 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
SNX6-203ENST00000555416 A0A087WVE0 104 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms