RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 A8MWP4 228 aa6.01□□□□□ -1.45
TDP1-211ENST00000555178 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
TDP1-211ENST00000555178 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
TDP1-211ENST00000555178 HIST1H4AP62805 103 aaKnown RBP6□□□□□ -1.45
TDP1-211ENST00000555178 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
TDP1-211ENST00000555178 J3KT08 172 aa5.99□□□□□ -1.45
TDP1-211ENST00000555178 PRR4Q16378 134 aa5.98□□□□□ -1.45
TDP1-211ENST00000555178 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
TDP1-211ENST00000555178 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
TDP1-211ENST00000555178 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
TDP1-211ENST00000555178 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
TDP1-211ENST00000555178 LRP2P98164 4655 aa5.95□□□□□ -1.46
TDP1-211ENST00000555178 NDUFB1O75438 58 aa5.95□□□□□ -1.46
TDP1-211ENST00000555178 IGLV7-46A0A075B6I9 117 aa5.94□□□□□ -1.46
TDP1-211ENST00000555178 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
TDP1-211ENST00000555178 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
TDP1-211ENST00000555178 C8orf17Q9NRJ1 99 aa5.93□□□□□ -1.46
TDP1-211ENST00000555178 HCG22E2RYF7 251 aa5.91□□□□□ -1.46
TDP1-211ENST00000555178 FP248Q71RG6 208 aaPredicted RBP5.91□□□□□ -1.46
TDP1-211ENST00000555178 IMUPQ9GZP8 106 aa5.91□□□□□ -1.46
TDP1-211ENST00000555178 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
TDP1-211ENST00000555178 LINC00313P59037 77 aa5.9□□□□□ -1.47
TDP1-211ENST00000555178 FAM236AA0A1B0GUQ0 79 aa5.89□□□□□ -1.47
TDP1-211ENST00000555178 FAM236BA0A1B0GV22 79 aa5.89□□□□□ -1.47
TDP1-211ENST00000555178 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
TDP1-211ENST00000555178 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
TDP1-211ENST00000555178 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
TDP1-211ENST00000555178 C8orf87E5RJ46 101 aa5.87□□□□□ -1.47
TDP1-211ENST00000555178 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
TDP1-211ENST00000555178 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
TDP1-211ENST00000555178 XP32Q5T750 250 aa5.83□□□□□ -1.48
TDP1-211ENST00000555178 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
TDP1-211ENST00000555178 NDUFS5O43920 106 aa5.82□□□□□ -1.48
TDP1-211ENST00000555178 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
TDP1-211ENST00000555178 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
TDP1-211ENST00000555178 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
TDP1-211ENST00000555178 C20orf166-AS1Q96NR2 134 aa5.79□□□□□ -1.48
TDP1-211ENST00000555178 OCR1Q9BZK8 76 aa5.78□□□□□ -1.48
TDP1-211ENST00000555178 A8MUU9 505 aa5.78□□□□□ -1.48
TDP1-211ENST00000555178 Q5W150 140 aa5.76□□□□□ -1.49
TDP1-211ENST00000555178 ATOX1O00244 68 aa5.75□□□□□ -1.49
TDP1-211ENST00000555178 Q75L30 129 aa5.75□□□□□ -1.49
TDP1-211ENST00000555178 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
TDP1-211ENST00000555178 MUC2Q02817 5179 aa5.73□□□□□ -1.49
TDP1-211ENST00000555178 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
TDP1-211ENST00000555178 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
TDP1-211ENST00000555178 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
TDP1-211ENST00000555178 PCOTHQ58A44 107 aa5.71□□□□□ -1.5
TDP1-211ENST00000555178 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
TDP1-211ENST00000555178 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
TDP1-211ENST00000555178 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
TDP1-211ENST00000555178 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
TDP1-211ENST00000555178 UQCRQO14949 82 aa5.69□□□□□ -1.5
TDP1-211ENST00000555178 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
TDP1-211ENST00000555178 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
TDP1-211ENST00000555178 H0Y9P7 68 aa5.68□□□□□ -1.5
TDP1-211ENST00000555178 ATP11AUNQ6ZP68 121 aa5.67□□□□□ -1.5
TDP1-211ENST00000555178 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
TDP1-211ENST00000555178 COX7CP15954 63 aa5.64□□□□□ -1.51
TDP1-211ENST00000555178 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
TDP1-211ENST00000555178 SNURFQ9Y675 71 aa5.64□□□□□ -1.51
TDP1-211ENST00000555178 CCDC179H3BU77 68 aa5.63□□□□□ -1.51
TDP1-211ENST00000555178 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
TDP1-211ENST00000555178 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
TDP1-211ENST00000555178 IGKV2D-30A0A075B6S6 120 aa5.63□□□□□ -1.51
TDP1-211ENST00000555178 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
TDP1-211ENST00000555178 MP68P56378 58 aa5.62□□□□□ -1.51
TDP1-211ENST00000555178 CYSTM1Q9H1C7 97 aa5.62□□□□□ -1.51
TDP1-211ENST00000555178 C1orf64Q8NEQ6 169 aa5.62□□□□□ -1.51
TDP1-211ENST00000555178 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
TDP1-211ENST00000555178 A0A0U1RQV1 116 aa5.6□□□□□ -1.51
TDP1-211ENST00000555178 PCP4P48539 62 aa5.59□□□□□ -1.51
TDP1-211ENST00000555178 SPINK7P58062 85 aa5.59□□□□□ -1.52
TDP1-211ENST00000555178 KLKP1Q107X0 134 aa5.58□□□□□ -1.52
TDP1-211ENST00000555178 CYP4F30PQ9H0H9 118 aa5.58□□□□□ -1.52
TDP1-211ENST00000555178 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
TDP1-211ENST00000555178 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
TDP1-211ENST00000555178 H3BPC8 53 aa5.55□□□□□ -1.52
TDP1-211ENST00000555178 HRES1P13985 223 aa5.51□□□□□ -1.53
TDP1-211ENST00000555178 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
TDP1-211ENST00000555178 C4orf26Q17RF5 130 aa5.5□□□□□ -1.53
TDP1-211ENST00000555178 H7BZZ5 65 aa5.5□□□□□ -1.53
TDP1-211ENST00000555178 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
TDP1-211ENST00000555178 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
TDP1-211ENST00000555178 MPLKIPQ8TAP9 179 aa5.45□□□□□ -1.54
TDP1-211ENST00000555178 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
TDP1-211ENST00000555178 NDUFC1O43677 76 aa5.42□□□□□ -1.54
TDP1-211ENST00000555178 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
TDP1-211ENST00000555178 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.55
TDP1-211ENST00000555178 RBM12B-AS1Q9P1G2 102 aa5.38□□□□□ -1.55
TDP1-211ENST00000555178 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
TDP1-211ENST00000555178 FAM236DA0A1B0GTK5 79 aa5.37□□□□□ -1.55
TDP1-211ENST00000555178 FAM236CP0DP71 79 aa5.37□□□□□ -1.55
TDP1-211ENST00000555178 DMAC1Q96GE9 116 aa5.36□□□□□ -1.55
TDP1-211ENST00000555178 TMEM258P61165 79 aa5.35□□□□□ -1.55
TDP1-211ENST00000555178 MT1HP80294 61 aa5.32□□□□□ -1.56
TDP1-211ENST00000555178 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
TDP1-211ENST00000555178 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
TDP1-211ENST00000555178 A8MUN3 132 aa5.29□□□□□ -1.56
TDP1-211ENST00000555178 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms