RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
TDP1-210ENST00000554976 IGKV4-1P06312 121 aa5.29□□□□□ -1.56
TDP1-210ENST00000554976 CYP4F30PQ9H0H9 118 aa5.29□□□□□ -1.56
TDP1-210ENST00000554976 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
TDP1-210ENST00000554976 Q5VV11 94 aa5.28□□□□□ -1.56
TDP1-210ENST00000554976 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
TDP1-210ENST00000554976 DSCR10P59022 87 aa5.27□□□□□ -1.57
TDP1-210ENST00000554976 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
TDP1-210ENST00000554976 C8orf87E5RJ46 101 aa5.27□□□□□ -1.57
TDP1-210ENST00000554976 Q96NJ1 140 aa5.27□□□□□ -1.57
TDP1-210ENST00000554976 A6NN06 94 aa5.26□□□□□ -1.57
TDP1-210ENST00000554976 A8MUN3 132 aa5.26□□□□□ -1.57
TDP1-210ENST00000554976 A8MU10 97 aa5.26□□□□□ -1.57
TDP1-210ENST00000554976 LINC00472Q9H8W2 130 aa5.26□□□□□ -1.57
TDP1-210ENST00000554976 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
TDP1-210ENST00000554976 A0A087WSZ3 146 aa5.24□□□□□ -1.57
TDP1-210ENST00000554976 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
TDP1-210ENST00000554976 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
TDP1-210ENST00000554976 H3BS24 57 aa5.24□□□□□ -1.57
TDP1-210ENST00000554976 MOBPQ13875 183 aa5.24□□□□□ -1.57
TDP1-210ENST00000554976 C7orf65Q6ZTY9 151 aa5.24□□□□□ -1.57
TDP1-210ENST00000554976 Q8N9L7 120 aa5.23□□□□□ -1.57
TDP1-210ENST00000554976 A0A087X002 238 aa5.23□□□□□ -1.57
TDP1-210ENST00000554976 LCA10Q71F78 164 aa5.23□□□□□ -1.57
TDP1-210ENST00000554976 HSPG2P98160 4391 aa5.22□□□□□ -1.57
TDP1-210ENST00000554976 LIMD2Q9BT23 127 aa5.22□□□□□ -1.57
TDP1-210ENST00000554976 HCG22E2RYF7 251 aa5.21□□□□□ -1.58
TDP1-210ENST00000554976 K7EQZ3 153 aa5.21□□□□□ -1.58
TDP1-210ENST00000554976 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
TDP1-210ENST00000554976 SPTSSBQ8NFR3 76 aa5.2□□□□□ -1.58
TDP1-210ENST00000554976 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
TDP1-210ENST00000554976 Q75L30 129 aa5.19□□□□□ -1.58
TDP1-210ENST00000554976 FAT1Q14517 4588 aa5.19□□□□□ -1.58
TDP1-210ENST00000554976 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
TDP1-210ENST00000554976 ASB16-AS1Q495Z4 193 aa5.18□□□□□ -1.58
TDP1-210ENST00000554976 DEFB116Q30KQ4 102 aa5.18□□□□□ -1.58
TDP1-210ENST00000554976 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
TDP1-210ENST00000554976 RYR1P21817 5038 aa5.17□□□□□ -1.58
TDP1-210ENST00000554976 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
TDP1-210ENST00000554976 NDUFB1O75438 58 aa5.17□□□□□ -1.58
TDP1-210ENST00000554976 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
TDP1-210ENST00000554976 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
TDP1-210ENST00000554976 A8MWP4 228 aa5.16□□□□□ -1.58
TDP1-210ENST00000554976 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.58
TDP1-210ENST00000554976 TNXBP22105 4242 aa5.15□□□□□ -1.58
TDP1-210ENST00000554976 SMR3BP02814 79 aaPredicted RBP5.15□□□□□ -1.59
TDP1-210ENST00000554976 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
TDP1-210ENST00000554976 EPPK1P58107 5090 aaKnown RBP5.13□□□□□ -1.59
TDP1-210ENST00000554976 MMP24-AS1A0A0U1RRL7 71 aa5.13□□□□□ -1.59
TDP1-210ENST00000554976 A6NED7 52 aa5.13□□□□□ -1.59
TDP1-210ENST00000554976 PRR26Q8N8Z3 221 aa5.12□□□□□ -1.59
TDP1-210ENST00000554976 CDK2AP2O75956 126 aa5.12□□□□□ -1.59
TDP1-210ENST00000554976 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
TDP1-210ENST00000554976 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
TDP1-210ENST00000554976 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
TDP1-210ENST00000554976 PLA2G1BP04054 148 aaKnown RBP5.1□□□□□ -1.59
TDP1-210ENST00000554976 PRR4Q16378 134 aa5.1□□□□□ -1.59
TDP1-210ENST00000554976 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.6
TDP1-210ENST00000554976 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
TDP1-210ENST00000554976 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
TDP1-210ENST00000554976 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
TDP1-210ENST00000554976 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
TDP1-210ENST00000554976 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
TDP1-210ENST00000554976 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
TDP1-210ENST00000554976 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
TDP1-210ENST00000554976 SPINK1P00995 79 aa5.05□□□□□ -1.6
TDP1-210ENST00000554976 LINC00313P59037 77 aa5.05□□□□□ -1.6
TDP1-210ENST00000554976 MP68P56378 58 aa5.04□□□□□ -1.6
TDP1-210ENST00000554976 H3BPC8 53 aa5.04□□□□□ -1.6
TDP1-210ENST00000554976 Q5VSD8 79 aa5.03□□□□□ -1.6
TDP1-210ENST00000554976 KRTAP16-1A8MUX0 517 aa5.03□□□□□ -1.6
TDP1-210ENST00000554976 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
TDP1-210ENST00000554976 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
TDP1-210ENST00000554976 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
TDP1-210ENST00000554976 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
TDP1-210ENST00000554976 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
TDP1-210ENST00000554976 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
TDP1-210ENST00000554976 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
TDP1-210ENST00000554976 SPAG11AQ6PDA7 123 aa5.01□□□□□ -1.61
TDP1-210ENST00000554976 FAM229AH3BQW9 127 aa5□□□□□ -1.61
TDP1-210ENST00000554976 COA5Q86WW8 74 aa5□□□□□ -1.61
TDP1-210ENST00000554976 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
TDP1-210ENST00000554976 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
TDP1-210ENST00000554976 Q8N1X5 172 aa4.97□□□□□ -1.61
TDP1-210ENST00000554976 SPINK7P58062 85 aa4.96□□□□□ -1.62
TDP1-210ENST00000554976 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
TDP1-210ENST00000554976 IGLV7-46A0A075B6I9 117 aa4.95□□□□□ -1.62
TDP1-210ENST00000554976 H0Y9P7 68 aa4.95□□□□□ -1.62
TDP1-210ENST00000554976 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
TDP1-210ENST00000554976 Q5W150 140 aa4.93□□□□□ -1.62
TDP1-210ENST00000554976 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
TDP1-210ENST00000554976 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
TDP1-210ENST00000554976 LCE2BO14633 110 aa4.91□□□□□ -1.62
TDP1-210ENST00000554976 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.62
TDP1-210ENST00000554976 FLG2Q5D862 2391 aaPredicted RBP4.9□□□□□ -1.63
TDP1-210ENST00000554976 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
TDP1-210ENST00000554976 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
TDP1-210ENST00000554976 HERC2O95714 4834 aa4.88□□□□□ -1.63
TDP1-210ENST00000554976 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
TDP1-210ENST00000554976 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 303.1 ms