RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
SRP54-203ENST00000553544 H3BT86 120 aa6.22□□□□□ -1.41
SRP54-203ENST00000553544 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
SRP54-203ENST00000553544 VPS25Q9BRG1 176 aa6.22□□□□□ -1.41
SRP54-203ENST00000553544 TAX1BP3O14907 124 aa6.21□□□□□ -1.42
SRP54-203ENST00000553544 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SRP54-203ENST00000553544 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
SRP54-203ENST00000553544 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
SRP54-203ENST00000553544 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
SRP54-203ENST00000553544 Q75L30 129 aa6.17□□□□□ -1.42
SRP54-203ENST00000553544 Q96NJ1 140 aa6.16□□□□□ -1.42
SRP54-203ENST00000553544 SSPOA2VEC9 5147 aa6.15□□□□□ -1.42
SRP54-203ENST00000553544 J3KT08 172 aa6.15□□□□□ -1.42
SRP54-203ENST00000553544 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
SRP54-203ENST00000553544 Q6ZQT0 140 aa6.15□□□□□ -1.42
SRP54-203ENST00000553544 USH2AO75445 5202 aa6.14□□□□□ -1.43
SRP54-203ENST00000553544 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
SRP54-203ENST00000553544 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
SRP54-203ENST00000553544 GTF2H5Q6ZYL4 71 aa6.12□□□□□ -1.43
SRP54-203ENST00000553544 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
SRP54-203ENST00000553544 LINC00472Q9H8W2 130 aa6.12□□□□□ -1.43
SRP54-203ENST00000553544 PCP4L1A6NKN8 68 aa6.11□□□□□ -1.43
SRP54-203ENST00000553544 NDUFB1O75438 58 aa6.11□□□□□ -1.43
SRP54-203ENST00000553544 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
SRP54-203ENST00000553544 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
SRP54-203ENST00000553544 A8MUU9 505 aa6.1□□□□□ -1.43
SRP54-203ENST00000553544 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
SRP54-203ENST00000553544 LINC00313P59037 77 aa6.1□□□□□ -1.43
SRP54-203ENST00000553544 K7EP34 96 aa6.09□□□□□ -1.43
SRP54-203ENST00000553544 NREPQ16612 68 aa6.07□□□□□ -1.44
SRP54-203ENST00000553544 MTURNQ8N3F0 131 aa6.07□□□□□ -1.44
SRP54-203ENST00000553544 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
SRP54-203ENST00000553544 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
SRP54-203ENST00000553544 DSCR10P59022 87 aa6.06□□□□□ -1.44
SRP54-203ENST00000553544 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
SRP54-203ENST00000553544 DEFB116Q30KQ4 102 aa6.05□□□□□ -1.44
SRP54-203ENST00000553544 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
SRP54-203ENST00000553544 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
SRP54-203ENST00000553544 A8MWP4 228 aa6.04□□□□□ -1.44
SRP54-203ENST00000553544 F8W1H4 67 aa6.03□□□□□ -1.44
SRP54-203ENST00000553544 NOTCH2NLQ7Z3S9 236 aa6.01□□□□□ -1.45
SRP54-203ENST00000553544 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
SRP54-203ENST00000553544 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
SRP54-203ENST00000553544 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
SRP54-203ENST00000553544 BPY2O14599 106 aa5.98□□□□□ -1.45
SRP54-203ENST00000553544 MT2AP02795 61 aa5.98□□□□□ -1.45
SRP54-203ENST00000553544 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
SRP54-203ENST00000553544 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
SRP54-203ENST00000553544 PRR15Q8IV56 129 aa5.97□□□□□ -1.45
SRP54-203ENST00000553544 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
SRP54-203ENST00000553544 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
SRP54-203ENST00000553544 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
SRP54-203ENST00000553544 Q6ZVQ6 151 aa5.94□□□□□ -1.46
SRP54-203ENST00000553544 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
SRP54-203ENST00000553544 TMEM254Q8TBM7 123 aa5.93□□□□□ -1.46
SRP54-203ENST00000553544 MT1FP04733 61 aa5.92□□□□□ -1.46
SRP54-203ENST00000553544 ETDBQ3ZM63 59 aa5.92□□□□□ -1.46
SRP54-203ENST00000553544 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
SRP54-203ENST00000553544 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
SRP54-203ENST00000553544 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
SRP54-203ENST00000553544 K7EQZ3 153 aa5.9□□□□□ -1.46
SRP54-203ENST00000553544 HRES1P13985 223 aa5.9□□□□□ -1.46
SRP54-203ENST00000553544 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
SRP54-203ENST00000553544 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
SRP54-203ENST00000553544 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
SRP54-203ENST00000553544 FAM236DA0A1B0GTK5 79 aa5.88□□□□□ -1.47
SRP54-203ENST00000553544 ACYP1P07311 99 aa5.88□□□□□ -1.47
SRP54-203ENST00000553544 FAM236CP0DP71 79 aa5.88□□□□□ -1.47
SRP54-203ENST00000553544 RBM12B-AS1Q9P1G2 102 aa5.87□□□□□ -1.47
SRP54-203ENST00000553544 NDUFS5O43920 106 aa5.86□□□□□ -1.47
SRP54-203ENST00000553544 CXCL6P80162 114 aa5.85□□□□□ -1.47
SRP54-203ENST00000553544 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
SRP54-203ENST00000553544 FAM240AA0A1B0GVK7 77 aa5.84□□□□□ -1.47
SRP54-203ENST00000553544 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
SRP54-203ENST00000553544 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
SRP54-203ENST00000553544 KRTAP4-12Q9BQ66 201 aa5.83□□□□□ -1.48
SRP54-203ENST00000553544 HCG22E2RYF7 251 aa5.82□□□□□ -1.48
SRP54-203ENST00000553544 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
SRP54-203ENST00000553544 ATP5EP2Q5VTU8 51 aa5.81□□□□□ -1.48
SRP54-203ENST00000553544 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
SRP54-203ENST00000553544 SPINK7P58062 85 aa5.8□□□□□ -1.48
SRP54-203ENST00000553544 Q8N9L7 120 aa5.79□□□□□ -1.48
SRP54-203ENST00000553544 J3QR89 54 aa5.78□□□□□ -1.48
SRP54-203ENST00000553544 A0A1B0GV90 55 aa5.77□□□□□ -1.49
SRP54-203ENST00000553544 TP53AIP1Q9HCN2 124 aa5.76□□□□□ -1.49
SRP54-203ENST00000553544 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
SRP54-203ENST00000553544 LINC00643Q86TS7 51 aa5.71□□□□□ -1.5
SRP54-203ENST00000553544 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
SRP54-203ENST00000553544 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
SRP54-203ENST00000553544 HIST1H4AP62805 103 aaKnown RBP5.69□□□□□ -1.5
SRP54-203ENST00000553544 Q5W150 140 aa5.66□□□□□ -1.5
SRP54-203ENST00000553544 H3BS24 57 aa5.65□□□□□ -1.5
SRP54-203ENST00000553544 NEBP20929 6669 aa5.65□□□□□ -1.51
SRP54-203ENST00000553544 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
SRP54-203ENST00000553544 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
SRP54-203ENST00000553544 TRAV22A0A0B4J277 110 aa5.61□□□□□ -1.51
SRP54-203ENST00000553544 ATOX1O00244 68 aa5.6□□□□□ -1.51
SRP54-203ENST00000553544 UQCRQO14949 82 aa5.6□□□□□ -1.51
SRP54-203ENST00000553544 LOC101927531A0A1B0GV80 90 aa5.59□□□□□ -1.51
SRP54-203ENST00000553544 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms