RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FAM236CP0DP71 79 aa5.14□□□□□ -1.59
ACTN1-208ENST00000553370 FXYD2P54710 66 aa5.14□□□□□ -1.59
ACTN1-208ENST00000553370 BATFQ16520 125 aa5.13□□□□□ -1.59
ACTN1-208ENST00000553370 A0A0B4J2C4 111 aa5.12□□□□□ -1.59
ACTN1-208ENST00000553370 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
ACTN1-208ENST00000553370 RAB37Q96AX2 223 aa5.11□□□□□ -1.59
ACTN1-208ENST00000553370 PRO1854Q9UHT4 67 aa5.11□□□□□ -1.59
ACTN1-208ENST00000553370 A0A087WSZ3 146 aa5.09□□□□□ -1.59
ACTN1-208ENST00000553370 TAX1BP3O14907 124 aa5.09□□□□□ -1.59
ACTN1-208ENST00000553370 TEN1Q86WV5 123 aa5.09□□□□□ -1.59
ACTN1-208ENST00000553370 DSCR10P59022 87 aa5.08□□□□□ -1.6
ACTN1-208ENST00000553370 FABP2P12104 132 aa5.07□□□□□ -1.6
ACTN1-208ENST00000553370 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
ACTN1-208ENST00000553370 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
ACTN1-208ENST00000553370 A8MUU9 505 aa5.06□□□□□ -1.6
ACTN1-208ENST00000553370 H0YGX0 51 aa5.05□□□□□ -1.6
ACTN1-208ENST00000553370 H3BMG7 143 aa5.05□□□□□ -1.6
ACTN1-208ENST00000553370 K7ERJ3 54 aa5.05□□□□□ -1.6
ACTN1-208ENST00000553370 RBM12B-AS1Q9P1G2 102 aa5.05□□□□□ -1.6
ACTN1-208ENST00000553370 A0A1B0GV72 72 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 A0A1W2PPM0 123 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 COX6CP09669 75 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 LINC00313P59037 77 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
ACTN1-208ENST00000553370 DNAL4O96015 105 aa5.02□□□□□ -1.61
ACTN1-208ENST00000553370 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
ACTN1-208ENST00000553370 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
ACTN1-208ENST00000553370 PSMB2P49721 201 aa5.01□□□□□ -1.61
ACTN1-208ENST00000553370 USH2AO75445 5202 aa5□□□□□ -1.61
ACTN1-208ENST00000553370 A0A1B0GV90 55 aa5□□□□□ -1.61
ACTN1-208ENST00000553370 GTF2H5Q6ZYL4 71 aa5□□□□□ -1.61
ACTN1-208ENST00000553370 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
ACTN1-208ENST00000553370 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
ACTN1-208ENST00000553370 ANKRD29Q8N6D5 301 aa4.99□□□□□ -1.61
ACTN1-208ENST00000553370 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
ACTN1-208ENST00000553370 A0A1B0GX51 115 aa4.98□□□□□ -1.61
ACTN1-208ENST00000553370 MTURNQ8N3F0 131 aa4.98□□□□□ -1.61
ACTN1-208ENST00000553370 NAA38Q9BRA0 125 aaKnown RBP4.98□□□□□ -1.61
ACTN1-208ENST00000553370 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
ACTN1-208ENST00000553370 SPCS1Q9Y6A9 102 aa4.98□□□□□ -1.61
ACTN1-208ENST00000553370 K7EP34 96 aa4.97□□□□□ -1.61
ACTN1-208ENST00000553370 TRACP01848 142 aa4.97□□□□□ -1.61
ACTN1-208ENST00000553370 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
ACTN1-208ENST00000553370 ORMDL1Q9P0S3 153 aa4.97□□□□□ -1.61
ACTN1-208ENST00000553370 A0A1W2PNM2 257 aa4.96□□□□□ -1.62
ACTN1-208ENST00000553370 MT2AP02795 61 aa4.96□□□□□ -1.62
ACTN1-208ENST00000553370 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
ACTN1-208ENST00000553370 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
ACTN1-208ENST00000553370 VPS25Q9BRG1 176 aa4.96□□□□□ -1.62
ACTN1-208ENST00000553370 TRBV7-4A0A0J9YYF1 115 aa4.95□□□□□ -1.62
ACTN1-208ENST00000553370 H3BQ85 93 aa4.95□□□□□ -1.62
ACTN1-208ENST00000553370 CCKP06307 115 aa4.95□□□□□ -1.62
ACTN1-208ENST00000553370 F8W1H4 67 aa4.94□□□□□ -1.62
ACTN1-208ENST00000553370 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
ACTN1-208ENST00000553370 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
ACTN1-208ENST00000553370 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
ACTN1-208ENST00000553370 TMEM256-PLSCR3K7ERE1 68 aa4.92□□□□□ -1.62
ACTN1-208ENST00000553370 MT1FP04733 61 aa4.92□□□□□ -1.62
ACTN1-208ENST00000553370 HRES1P13985 223 aa4.92□□□□□ -1.62
ACTN1-208ENST00000553370 C8orf87E5RJ46 101 aa4.91□□□□□ -1.62
ACTN1-208ENST00000553370 A0A1B0GVX0 72 aa4.9□□□□□ -1.63
ACTN1-208ENST00000553370 PRO0461Q9UI25 63 aa4.9□□□□□ -1.63
ACTN1-208ENST00000553370 C9JAW5 83 aa4.89□□□□□ -1.63
ACTN1-208ENST00000553370 H3BT86 120 aa4.89□□□□□ -1.63
ACTN1-208ENST00000553370 BAALC-AS2P0C853 105 aa4.89□□□□□ -1.63
ACTN1-208ENST00000553370 SEC61GP60059 68 aa4.89□□□□□ -1.63
ACTN1-208ENST00000553370 LINC00472Q9H8W2 130 aa4.89□□□□□ -1.63
ACTN1-208ENST00000553370 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
ACTN1-208ENST00000553370 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
ACTN1-208ENST00000553370 J3KT08 172 aa4.86□□□□□ -1.63
ACTN1-208ENST00000553370 NDUFB1O75438 58 aa4.86□□□□□ -1.63
ACTN1-208ENST00000553370 SPINK7P58062 85 aa4.85□□□□□ -1.63
ACTN1-208ENST00000553370 RBM3P98179 157 aaKnown RBP4.85□□□□□ -1.63
ACTN1-208ENST00000553370 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
ACTN1-208ENST00000553370 A8MWP4 228 aa4.83□□□□□ -1.64
ACTN1-208ENST00000553370 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
ACTN1-208ENST00000553370 JMJD7-PLA2G4BH0Y9G9 81 aa4.82□□□□□ -1.64
ACTN1-208ENST00000553370 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
ACTN1-208ENST00000553370 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
ACTN1-208ENST00000553370 PDE6GP18545 87 aa4.78□□□□□ -1.64
ACTN1-208ENST00000553370 J3QR89 54 aa4.77□□□□□ -1.65
ACTN1-208ENST00000553370 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
ACTN1-208ENST00000553370 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
ACTN1-208ENST00000553370 Q6ZQT0 140 aa4.76□□□□□ -1.65
ACTN1-208ENST00000553370 LOC110117498A0A087WWA1 95 aa4.75□□□□□ -1.65
ACTN1-208ENST00000553370 IGKV3D-7A0A0C4DH55 119 aa4.75□□□□□ -1.65
ACTN1-208ENST00000553370 K7ERU9 68 aa4.75□□□□□ -1.65
ACTN1-208ENST00000553370 NDUFS5O43920 106 aa4.75□□□□□ -1.65
ACTN1-208ENST00000553370 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
ACTN1-208ENST00000553370 ACYP1P07311 99 aa4.74□□□□□ -1.65
ACTN1-208ENST00000553370 A0A1B0GW54 56 aa4.73□□□□□ -1.65
ACTN1-208ENST00000553370 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
ACTN1-208ENST00000553370 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
ACTN1-208ENST00000553370 C14orf132Q9NPU4 83 aa4.72□□□□□ -1.65
ACTN1-208ENST00000553370 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
ACTN1-208ENST00000553370 NREPQ16612 68 aa4.7□□□□□ -1.66
ACTN1-208ENST00000553370 TMEM254Q8TBM7 123 aa4.69□□□□□ -1.66
ACTN1-208ENST00000553370 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
ACTN1-208ENST00000553370 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms