RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 VPS25Q9BRG1 176 aa6.83□□□□□ -1.32
HNRNPC-205ENST00000553300 H3BS24 57 aa6.82□□□□□ -1.32
HNRNPC-205ENST00000553300 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
HNRNPC-205ENST00000553300 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
HNRNPC-205ENST00000553300 A0A1B0GW54 56 aa6.8□□□□□ -1.32
HNRNPC-205ENST00000553300 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
HNRNPC-205ENST00000553300 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
HNRNPC-205ENST00000553300 IGHV6-1A0A0B4J1U7 121 aa6.79□□□□□ -1.32
HNRNPC-205ENST00000553300 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
HNRNPC-205ENST00000553300 J3KT08 172 aa6.79□□□□□ -1.32
HNRNPC-205ENST00000553300 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
HNRNPC-205ENST00000553300 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
HNRNPC-205ENST00000553300 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
HNRNPC-205ENST00000553300 PDE6GP18545 87 aa6.78□□□□□ -1.32
HNRNPC-205ENST00000553300 Q6ZQT0 140 aa6.77□□□□□ -1.33
HNRNPC-205ENST00000553300 KRTAP9-9Q9BYP9 154 aa6.77□□□□□ -1.33
HNRNPC-205ENST00000553300 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
HNRNPC-205ENST00000553300 A0A1B0GVX0 72 aa6.76□□□□□ -1.33
HNRNPC-205ENST00000553300 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
HNRNPC-205ENST00000553300 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
HNRNPC-205ENST00000553300 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
HNRNPC-205ENST00000553300 NDUFB1O75438 58 aa6.73□□□□□ -1.33
HNRNPC-205ENST00000553300 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
HNRNPC-205ENST00000553300 BATFQ16520 125 aa6.69□□□□□ -1.34
HNRNPC-205ENST00000553300 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
HNRNPC-205ENST00000553300 PCP4L1A6NKN8 68 aa6.68□□□□□ -1.34
HNRNPC-205ENST00000553300 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
HNRNPC-205ENST00000553300 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
HNRNPC-205ENST00000553300 A8MWP4 228 aa6.67□□□□□ -1.34
HNRNPC-205ENST00000553300 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
HNRNPC-205ENST00000553300 FAM236DA0A1B0GTK5 79 aa6.65□□□□□ -1.35
HNRNPC-205ENST00000553300 FAM236CP0DP71 79 aa6.65□□□□□ -1.35
HNRNPC-205ENST00000553300 NREPQ16612 68 aa6.65□□□□□ -1.35
HNRNPC-205ENST00000553300 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.35
HNRNPC-205ENST00000553300 H3BT86 120 aa6.64□□□□□ -1.35
HNRNPC-205ENST00000553300 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
HNRNPC-205ENST00000553300 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
HNRNPC-205ENST00000553300 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
HNRNPC-205ENST00000553300 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
HNRNPC-205ENST00000553300 HRES1P13985 223 aa6.63□□□□□ -1.35
HNRNPC-205ENST00000553300 MPLKIPQ8TAP9 179 aa6.63□□□□□ -1.35
HNRNPC-205ENST00000553300 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
HNRNPC-205ENST00000553300 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
HNRNPC-205ENST00000553300 IGKV3D-7A0A0C4DH55 119 aa6.61□□□□□ -1.35
HNRNPC-205ENST00000553300 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
HNRNPC-205ENST00000553300 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
HNRNPC-205ENST00000553300 SPINK7P58062 85 aa6.58□□□□□ -1.36
HNRNPC-205ENST00000553300 Q6ZVQ6 151 aa6.58□□□□□ -1.36
HNRNPC-205ENST00000553300 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
HNRNPC-205ENST00000553300 KRTAP9-8Q9BYQ0 159 aa6.55□□□□□ -1.36
HNRNPC-205ENST00000553300 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
HNRNPC-205ENST00000553300 SPCS1Q9Y6A9 102 aa6.54□□□□□ -1.36
HNRNPC-205ENST00000553300 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
HNRNPC-205ENST00000553300 MMP24-AS1A0A0U1RRL7 71 aa6.52□□□□□ -1.37
HNRNPC-205ENST00000553300 hDV103S1A0JD37 113 aa6.52□□□□□ -1.37
HNRNPC-205ENST00000553300 BPY2O14599 106 aa6.51□□□□□ -1.37
HNRNPC-205ENST00000553300 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
HNRNPC-205ENST00000553300 K7EQZ3 153 aa6.49□□□□□ -1.37
HNRNPC-205ENST00000553300 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
HNRNPC-205ENST00000553300 NDUFS5O43920 106 aa6.47□□□□□ -1.37
HNRNPC-205ENST00000553300 WFDC13Q8IUB5 93 aa6.47□□□□□ -1.37
HNRNPC-205ENST00000553300 MT2AP02795 61 aa6.44□□□□□ -1.38
HNRNPC-205ENST00000553300 K7EP34 96 aa6.43□□□□□ -1.38
HNRNPC-205ENST00000553300 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
HNRNPC-205ENST00000553300 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
HNRNPC-205ENST00000553300 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
HNRNPC-205ENST00000553300 PCP4P48539 62 aa6.41□□□□□ -1.38
HNRNPC-205ENST00000553300 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
HNRNPC-205ENST00000553300 KRTAP10-10P60014 251 aa6.4□□□□□ -1.39
HNRNPC-205ENST00000553300 USH2AO75445 5202 aa6.39□□□□□ -1.39
HNRNPC-205ENST00000553300 MT1FP04733 61 aa6.39□□□□□ -1.39
HNRNPC-205ENST00000553300 Q8N9L7 120 aa6.39□□□□□ -1.39
HNRNPC-205ENST00000553300 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
HNRNPC-205ENST00000553300 GTF2H5Q6ZYL4 71 aa6.38□□□□□ -1.39
HNRNPC-205ENST00000553300 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
HNRNPC-205ENST00000553300 A0A1B0GV90 55 aa6.37□□□□□ -1.39
HNRNPC-205ENST00000553300 CXCL6P80162 114 aa6.37□□□□□ -1.39
HNRNPC-205ENST00000553300 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
HNRNPC-205ENST00000553300 HCG22E2RYF7 251 aa6.36□□□□□ -1.39
HNRNPC-205ENST00000553300 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
HNRNPC-205ENST00000553300 Q5W150 140 aa6.36□□□□□ -1.39
HNRNPC-205ENST00000553300 F8W1H4 67 aa6.35□□□□□ -1.39
HNRNPC-205ENST00000553300 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
HNRNPC-205ENST00000553300 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
HNRNPC-205ENST00000553300 SSPOA2VEC9 5147 aa6.34□□□□□ -1.39
HNRNPC-205ENST00000553300 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
HNRNPC-205ENST00000553300 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
HNRNPC-205ENST00000553300 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
HNRNPC-205ENST00000553300 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
HNRNPC-205ENST00000553300 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
HNRNPC-205ENST00000553300 ACYP1P07311 99 aa6.2□□□□□ -1.42
HNRNPC-205ENST00000553300 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
HNRNPC-205ENST00000553300 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
HNRNPC-205ENST00000553300 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
HNRNPC-205ENST00000553300 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
HNRNPC-205ENST00000553300 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
HNRNPC-205ENST00000553300 S4R3F8 94 aa6.13□□□□□ -1.43
HNRNPC-205ENST00000553300 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
HNRNPC-205ENST00000553300 C5orf47Q569G3 176 aa6.11□□□□□ -1.43
HNRNPC-205ENST00000553300 CSAG1Q6PB30 78 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms