RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 CDKN2A-AS1Q9UH64 79 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 A8MUU9 505 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 INSP01308 110 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 CCL18P55774 89 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 COX17Q14061 63 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 DEFB112Q30KQ8 113 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
PFDN5-219ENST00000553171 C10orf25Q5T742 122 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 LRP2P98164 4655 aa3.11□□□□□ -1.91
PFDN5-219ENST00000553171 TRGV2A0A075B6R0 118 aa3.1□□□□□ -1.91
PFDN5-219ENST00000553171 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
PFDN5-219ENST00000553171 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
PFDN5-219ENST00000553171 SPINK13Q1W4C9 94 aa3.1□□□□□ -1.91
PFDN5-219ENST00000553171 KCNQ1DNQ9H478 68 aa3.1□□□□□ -1.91
PFDN5-219ENST00000553171 FAT1Q14517 4588 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 A0A087WYN8 130 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 TRBV6-4A0A1B0GX49 114 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 IGKV4-1P06312 121 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 COA5Q86WW8 74 aa3.09□□□□□ -1.91
PFDN5-219ENST00000553171 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 H3BUX3 64 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 LINC00158P58513 81 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 Q8NBF4 154 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 SMIM11BQ8TCY0 68 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 SPRR4Q96PI1 79 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 LRP1BQ9NZR2 4599 aa3.08□□□□□ -1.92
PFDN5-219ENST00000553171 IGKV3-7A0A075B6H7 116 aa3.07□□□□□ -1.92
PFDN5-219ENST00000553171 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.07□□□□□ -1.92
PFDN5-219ENST00000553171 PANO1I0J062 215 aa3.07□□□□□ -1.92
PFDN5-219ENST00000553171 IGKV3-20P01619 116 aa3.07□□□□□ -1.92
PFDN5-219ENST00000553171 Q8IZM0 81 aa3.07□□□□□ -1.92
PFDN5-219ENST00000553171 IGLV4-60A0A075B6I1 120 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 IGLV7-46A0A075B6I9 117 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 A0A1B0GUV1 79 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 DEFB131AP59861 70 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 COX6A2Q02221 97 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 Q6ZTI0 123 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 C16orf74Q96GX8 76 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 DNAH5Q8TE73 4624 aa3.06□□□□□ -1.92
PFDN5-219ENST00000553171 IGKV2-28A0A075B6P5 120 aa3.05□□□□□ -1.92
PFDN5-219ENST00000553171 KRTAP29-1A8MX34 341 aaPredicted RBP3.05□□□□□ -1.92
PFDN5-219ENST00000553171 IGKV2D-28P01615 120 aa3.05□□□□□ -1.92
PFDN5-219ENST00000553171 Q5W150 140 aa3.05□□□□□ -1.92
PFDN5-219ENST00000553171 ZNF861PO60384 105 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 DEFB1P60022 68 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 LY6EQ16553 131 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 BRD3OSQ6XYD6 125 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 C9orf163Q8N9P6 203 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 C4orf3Q8WVX3 66 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
PFDN5-219ENST00000553171 TRGV1A0A0A0MS02 117 aa3.03□□□□□ -1.92
PFDN5-219ENST00000553171 LINC00959A0A1B0GUT2 108 aa3.03□□□□□ -1.92
PFDN5-219ENST00000553171 HTN1P15515 57 aa3.03□□□□□ -1.92
PFDN5-219ENST00000553171 SLURP1P55000 103 aa3.03□□□□□ -1.92
PFDN5-219ENST00000553171 LELP1Q5T871 98 aa3.03□□□□□ -1.92
PFDN5-219ENST00000553171 SORL1Q92673 2214 aa3.03□□□□□ -1.93
PFDN5-219ENST00000553171 KRTAP10-2P60368 255 aa3.02□□□□□ -1.93
PFDN5-219ENST00000553171 LINC00575Q6W349 94 aa3.02□□□□□ -1.93
PFDN5-219ENST00000553171 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
PFDN5-219ENST00000553171 TOMM7Q9P0U1 55 aa3.02□□□□□ -1.93
PFDN5-219ENST00000553171 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
PFDN5-219ENST00000553171 IGLV7-43P04211 117 aa3.01□□□□□ -1.93
PFDN5-219ENST00000553171 COX7BP24311 80 aa3.01□□□□□ -1.93
PFDN5-219ENST00000553171 GVQW2A0A096LPI5 108 aaPredicted RBP3□□□□□ -1.93
PFDN5-219ENST00000553171 A0A0J9YWU9 116 aa3□□□□□ -1.93
PFDN5-219ENST00000553171 SLPIP03973 132 aa3□□□□□ -1.93
PFDN5-219ENST00000553171 A0A1B0GU33 70 aa2.99□□□□□ -1.93
PFDN5-219ENST00000553171 Q5VSD8 79 aa2.99□□□□□ -1.93
PFDN5-219ENST00000553171 IGLV6-57P01721 117 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 C10orf99Q6UWK7 81 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 LINC00612Q8N6U2 182 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 PRO0255Q9UI72 69 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 KLK12Q9UKR0 248 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
PFDN5-219ENST00000553171 A0A1B0GU69 56 aa2.97□□□□□ -1.93
PFDN5-219ENST00000553171 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
PFDN5-219ENST00000553171 NOP10Q9NPE3 64 aaKnown RBP2.97□□□□□ -1.93
PFDN5-219ENST00000553171 DEFB131BA0A096LNP1 70 aa2.96□□□□□ -1.94
PFDN5-219ENST00000553171 A0A087WTM6 91 aa2.95□□□□□ -1.94
PFDN5-219ENST00000553171 Q6ZQY7 126 aa2.95□□□□□ -1.94
PFDN5-219ENST00000553171 LINC00472Q9H8W2 130 aa2.94□□□□□ -1.94
PFDN5-219ENST00000553171 M0R2N4 97 aa2.93□□□□□ -1.94
PFDN5-219ENST00000553171 Q8N377 158 aa2.93□□□□□ -1.94
PFDN5-219ENST00000553171 Q8N9L7 120 aa2.93□□□□□ -1.94
PFDN5-219ENST00000553171 LRP1Q07954 4544 aaKnown RBP2.93□□□□□ -1.94
PFDN5-219ENST00000553171 IGLV5-48A0A075B6I7 105 aa2.92□□□□□ -1.94
PFDN5-219ENST00000553171 ANGP03950 147 aaKnown RBP2.92□□□□□ -1.94
PFDN5-219ENST00000553171 IGKV2D-24A0A075B6R9 120 aa2.91□□□□□ -1.94
PFDN5-219ENST00000553171 H3BNG1 76 aa2.91□□□□□ -1.94
PFDN5-219ENST00000553171 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
PFDN5-219ENST00000553171 DEFB136Q30KP8 78 aa2.91□□□□□ -1.94
PFDN5-219ENST00000553171 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
PFDN5-219ENST00000553171 NBDYA0A0U1RRE5 68 aa2.89□□□□□ -1.95
PFDN5-219ENST00000553171 HRES1P13985 223 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms