RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
TMEM116-216ENST00000552800 A0A087X002 238 aa5.74□□□□□ -1.49
TMEM116-216ENST00000552800 IGLV9-49A0A0B4J1Y8 123 aa5.74□□□□□ -1.49
TMEM116-216ENST00000552800 RPS29P62273 56 aaKnown RBP5.74□□□□□ -1.49
TMEM116-216ENST00000552800 C9orf153Q5TBE3 101 aa5.74□□□□□ -1.49
TMEM116-216ENST00000552800 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
TMEM116-216ENST00000552800 ANAPC11Q9NYG5 84 aa5.74□□□□□ -1.49
TMEM116-216ENST00000552800 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
TMEM116-216ENST00000552800 A0A087WVE0 104 aa5.73□□□□□ -1.49
TMEM116-216ENST00000552800 A8MWP4 228 aa5.72□□□□□ -1.49
TMEM116-216ENST00000552800 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
TMEM116-216ENST00000552800 PRR15Q8IV56 129 aa5.72□□□□□ -1.49
TMEM116-216ENST00000552800 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
TMEM116-216ENST00000552800 RYR3Q15413 4870 aa5.72□□□□□ -1.49
TMEM116-216ENST00000552800 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
TMEM116-216ENST00000552800 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
TMEM116-216ENST00000552800 COX7CP15954 63 aa5.7□□□□□ -1.5
TMEM116-216ENST00000552800 TRAV7A0A075B6U4 112 aa5.69□□□□□ -1.5
TMEM116-216ENST00000552800 UQCRQO14949 82 aa5.69□□□□□ -1.5
TMEM116-216ENST00000552800 SPINK1P00995 79 aa5.69□□□□□ -1.5
TMEM116-216ENST00000552800 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
TMEM116-216ENST00000552800 K7EQZ3 153 aa5.68□□□□□ -1.5
TMEM116-216ENST00000552800 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
TMEM116-216ENST00000552800 FAT1Q14517 4588 aa5.68□□□□□ -1.5
TMEM116-216ENST00000552800 HSPG2P98160 4391 aa5.66□□□□□ -1.5
TMEM116-216ENST00000552800 HCG22E2RYF7 251 aa5.65□□□□□ -1.5
TMEM116-216ENST00000552800 NDUFB1O75438 58 aa5.65□□□□□ -1.5
TMEM116-216ENST00000552800 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.5
TMEM116-216ENST00000552800 Q8N9L7 120 aa5.65□□□□□ -1.5
TMEM116-216ENST00000552800 RYR1P21817 5038 aa5.64□□□□□ -1.51
TMEM116-216ENST00000552800 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
TMEM116-216ENST00000552800 LIMD2Q9BT23 127 aa5.63□□□□□ -1.51
TMEM116-216ENST00000552800 A0A1B0GVX0 72 aa5.62□□□□□ -1.51
TMEM116-216ENST00000552800 DEFB116Q30KQ4 102 aa5.62□□□□□ -1.51
TMEM116-216ENST00000552800 C1orf195Q5TG92 126 aa5.62□□□□□ -1.51
TMEM116-216ENST00000552800 MMP24-AS1A0A0U1RRL7 71 aa5.61□□□□□ -1.51
TMEM116-216ENST00000552800 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
TMEM116-216ENST00000552800 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
TMEM116-216ENST00000552800 HRCT1Q6UXD1 115 aa5.61□□□□□ -1.51
TMEM116-216ENST00000552800 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
TMEM116-216ENST00000552800 CCDC179H3BU77 68 aa5.6□□□□□ -1.51
TMEM116-216ENST00000552800 C5orf47Q569G3 176 aa5.59□□□□□ -1.51
TMEM116-216ENST00000552800 PRR26Q8N8Z3 221 aa5.59□□□□□ -1.51
TMEM116-216ENST00000552800 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
TMEM116-216ENST00000552800 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
TMEM116-216ENST00000552800 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
TMEM116-216ENST00000552800 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
TMEM116-216ENST00000552800 TP53AIP1Q9HCN2 124 aa5.57□□□□□ -1.52
TMEM116-216ENST00000552800 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
TMEM116-216ENST00000552800 H3BPC8 53 aa5.56□□□□□ -1.52
TMEM116-216ENST00000552800 Q5VSD8 79 aa5.56□□□□□ -1.52
TMEM116-216ENST00000552800 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
TMEM116-216ENST00000552800 TNXBP22105 4242 aa5.56□□□□□ -1.52
TMEM116-216ENST00000552800 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
TMEM116-216ENST00000552800 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
TMEM116-216ENST00000552800 NDUFC1O43677 76 aa5.54□□□□□ -1.52
TMEM116-216ENST00000552800 Q8N9P0 234 aaPredicted RBP5.54□□□□□ -1.52
TMEM116-216ENST00000552800 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
TMEM116-216ENST00000552800 LINC00313P59037 77 aa5.52□□□□□ -1.53
TMEM116-216ENST00000552800 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
TMEM116-216ENST00000552800 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
TMEM116-216ENST00000552800 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
TMEM116-216ENST00000552800 FLG2Q5D862 2391 aaPredicted RBP5.51□□□□□ -1.53
TMEM116-216ENST00000552800 IGHV6-1A0A0B4J1U7 121 aa5.5□□□□□ -1.53
TMEM116-216ENST00000552800 H7BZZ5 65 aa5.5□□□□□ -1.53
TMEM116-216ENST00000552800 C20orf197Q8N268 126 aa5.5□□□□□ -1.53
TMEM116-216ENST00000552800 KIAA1109Q2LD37 5005 aa5.5□□□□□ -1.53
TMEM116-216ENST00000552800 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
TMEM116-216ENST00000552800 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
TMEM116-216ENST00000552800 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
TMEM116-216ENST00000552800 OXTP01178 125 aa5.48□□□□□ -1.53
TMEM116-216ENST00000552800 TMEM258P61165 79 aa5.48□□□□□ -1.53
TMEM116-216ENST00000552800 CYSTM1Q9H1C7 97 aa5.48□□□□□ -1.53
TMEM116-216ENST00000552800 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
TMEM116-216ENST00000552800 MP68P56378 58 aa5.46□□□□□ -1.54
TMEM116-216ENST00000552800 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
TMEM116-216ENST00000552800 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
TMEM116-216ENST00000552800 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
TMEM116-216ENST00000552800 RPS28P62857 69 aaKnown RBP5.44□□□□□ -1.54
TMEM116-216ENST00000552800 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
TMEM116-216ENST00000552800 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
TMEM116-216ENST00000552800 A8MUU9 505 aa5.41□□□□□ -1.54
TMEM116-216ENST00000552800 H0Y9P7 68 aa5.41□□□□□ -1.54
TMEM116-216ENST00000552800 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
TMEM116-216ENST00000552800 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
TMEM116-216ENST00000552800 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
TMEM116-216ENST00000552800 Q5W150 140 aa5.39□□□□□ -1.55
TMEM116-216ENST00000552800 LINC00208Q96KT6 92 aa5.39□□□□□ -1.55
TMEM116-216ENST00000552800 LOC101927531A0A1B0GV80 90 aa5.38□□□□□ -1.55
TMEM116-216ENST00000552800 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
TMEM116-216ENST00000552800 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
TMEM116-216ENST00000552800 IGLV7-46A0A075B6I9 117 aa5.35□□□□□ -1.55
TMEM116-216ENST00000552800 Q75L30 129 aa5.35□□□□□ -1.55
TMEM116-216ENST00000552800 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.55
TMEM116-216ENST00000552800 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
TMEM116-216ENST00000552800 NDUFS5O43920 106 aa5.34□□□□□ -1.55
TMEM116-216ENST00000552800 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
TMEM116-216ENST00000552800 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
TMEM116-216ENST00000552800 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
TMEM116-216ENST00000552800 HERC2O95714 4834 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms