RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
RAB5B-206ENST00000549505 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
RAB5B-206ENST00000549505 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
RAB5B-206ENST00000549505 IGLV9-49A0A0B4J1Y8 123 aa5.87□□□□□ -1.47
RAB5B-206ENST00000549505 H3BPC8 53 aa5.87□□□□□ -1.47
RAB5B-206ENST00000549505 hDV103S1A0JD37 113 aa5.84□□□□□ -1.47
RAB5B-206ENST00000549505 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.47
RAB5B-206ENST00000549505 LRP1BQ9NZR2 4599 aa5.84□□□□□ -1.48
RAB5B-206ENST00000549505 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
RAB5B-206ENST00000549505 A0A1B0GVX0 72 aa5.83□□□□□ -1.48
RAB5B-206ENST00000549505 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
RAB5B-206ENST00000549505 NDUFB1O75438 58 aa5.83□□□□□ -1.48
RAB5B-206ENST00000549505 DEFB116Q30KQ4 102 aa5.83□□□□□ -1.48
RAB5B-206ENST00000549505 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
RAB5B-206ENST00000549505 SPINK6Q6UWN8 80 aa5.82□□□□□ -1.48
RAB5B-206ENST00000549505 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
RAB5B-206ENST00000549505 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
RAB5B-206ENST00000549505 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
RAB5B-206ENST00000549505 TP53AIP1Q9HCN2 124 aa5.81□□□□□ -1.48
RAB5B-206ENST00000549505 A6NED7 52 aa5.81□□□□□ -1.48
RAB5B-206ENST00000549505 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
RAB5B-206ENST00000549505 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
RAB5B-206ENST00000549505 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
RAB5B-206ENST00000549505 SRRM2Q9UQ35 2752 aaKnown RBP5.79□□□□□ -1.48
RAB5B-206ENST00000549505 RYR2Q92736 4967 aa5.79□□□□□ -1.48
RAB5B-206ENST00000549505 A0A087X002 238 aa5.79□□□□□ -1.48
RAB5B-206ENST00000549505 TGP01266 2768 aa5.79□□□□□ -1.48
RAB5B-206ENST00000549505 C8orf87E5RJ46 101 aa5.79□□□□□ -1.48
RAB5B-206ENST00000549505 Q1T7F1 81 aa5.77□□□□□ -1.49
RAB5B-206ENST00000549505 Q5VV11 94 aa5.77□□□□□ -1.49
RAB5B-206ENST00000549505 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
RAB5B-206ENST00000549505 CYP4F30PQ9H0H9 118 aa5.76□□□□□ -1.49
RAB5B-206ENST00000549505 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
RAB5B-206ENST00000549505 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
RAB5B-206ENST00000549505 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
RAB5B-206ENST00000549505 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
RAB5B-206ENST00000549505 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
RAB5B-206ENST00000549505 LCA10Q71F78 164 aa5.74□□□□□ -1.49
RAB5B-206ENST00000549505 SPINK1P00995 79 aa5.73□□□□□ -1.49
RAB5B-206ENST00000549505 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
RAB5B-206ENST00000549505 MP68P56378 58 aa5.73□□□□□ -1.49
RAB5B-206ENST00000549505 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
RAB5B-206ENST00000549505 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
RAB5B-206ENST00000549505 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
RAB5B-206ENST00000549505 CDK2AP2O75956 126 aa5.71□□□□□ -1.5
RAB5B-206ENST00000549505 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
RAB5B-206ENST00000549505 H0Y9P7 68 aa5.7□□□□□ -1.5
RAB5B-206ENST00000549505 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
RAB5B-206ENST00000549505 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
RAB5B-206ENST00000549505 NOTCH2NLQ7Z3S9 236 aa5.69□□□□□ -1.5
RAB5B-206ENST00000549505 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
RAB5B-206ENST00000549505 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
RAB5B-206ENST00000549505 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
RAB5B-206ENST00000549505 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
RAB5B-206ENST00000549505 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
RAB5B-206ENST00000549505 A6NN06 94 aa5.65□□□□□ -1.5
RAB5B-206ENST00000549505 NDUFS5O43920 106 aa5.65□□□□□ -1.51
RAB5B-206ENST00000549505 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
RAB5B-206ENST00000549505 ATP11AUNQ6ZP68 121 aa5.64□□□□□ -1.51
RAB5B-206ENST00000549505 LINC00313P59037 77 aa5.63□□□□□ -1.51
RAB5B-206ENST00000549505 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
RAB5B-206ENST00000549505 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
RAB5B-206ENST00000549505 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
RAB5B-206ENST00000549505 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
RAB5B-206ENST00000549505 SPINK7P58062 85 aa5.59□□□□□ -1.51
RAB5B-206ENST00000549505 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
RAB5B-206ENST00000549505 Q5W150 140 aa5.59□□□□□ -1.51
RAB5B-206ENST00000549505 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
RAB5B-206ENST00000549505 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
RAB5B-206ENST00000549505 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
RAB5B-206ENST00000549505 SMR3BP02814 79 aaPredicted RBP5.55□□□□□ -1.52
RAB5B-206ENST00000549505 COA5Q86WW8 74 aa5.55□□□□□ -1.52
RAB5B-206ENST00000549505 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
RAB5B-206ENST00000549505 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
RAB5B-206ENST00000549505 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
RAB5B-206ENST00000549505 A8MUU9 505 aa5.52□□□□□ -1.53
RAB5B-206ENST00000549505 Q75L30 129 aa5.52□□□□□ -1.53
RAB5B-206ENST00000549505 HSPG2P98160 4391 aa5.5□□□□□ -1.53
RAB5B-206ENST00000549505 RYR1P21817 5038 aa5.49□□□□□ -1.53
RAB5B-206ENST00000549505 TNXBP22105 4242 aa5.49□□□□□ -1.53
RAB5B-206ENST00000549505 FAT1Q14517 4588 aa5.48□□□□□ -1.53
RAB5B-206ENST00000549505 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
RAB5B-206ENST00000549505 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
RAB5B-206ENST00000549505 RYR3Q15413 4870 aa5.48□□□□□ -1.53
RAB5B-206ENST00000549505 Q5VSD8 79 aa5.47□□□□□ -1.53
RAB5B-206ENST00000549505 KRTAP17-1Q9BYP8 105 aa5.45□□□□□ -1.54
RAB5B-206ENST00000549505 FLG2Q5D862 2391 aaPredicted RBP5.44□□□□□ -1.54
RAB5B-206ENST00000549505 HRES1P13985 223 aa5.44□□□□□ -1.54
RAB5B-206ENST00000549505 CSAG1Q6PB30 78 aa5.43□□□□□ -1.54
RAB5B-206ENST00000549505 Q8N1X5 172 aa5.43□□□□□ -1.54
RAB5B-206ENST00000549505 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
RAB5B-206ENST00000549505 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
RAB5B-206ENST00000549505 ACYP2P14621 99 aa5.41□□□□□ -1.54
RAB5B-206ENST00000549505 IGKV2D-30A0A075B6S6 120 aa5.4□□□□□ -1.54
RAB5B-206ENST00000549505 LINC01558Q9Y6Z2 57 aa5.39□□□□□ -1.55
RAB5B-206ENST00000549505 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
RAB5B-206ENST00000549505 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
RAB5B-206ENST00000549505 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
RAB5B-206ENST00000549505 XP32Q5T750 250 aa5.28□□□□□ -1.56
RAB5B-206ENST00000549505 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms