RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 UQCR11O14957 56 aa10.82□□□□□ -0.68
CCT4-204ENST00000544079 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
CCT4-204ENST00000544079 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
CCT4-204ENST00000544079 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
CCT4-204ENST00000544079 SRRM2Q9UQ35 2752 aaKnown RBP10.77□□□□□ -0.69
CCT4-204ENST00000544079 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
CCT4-204ENST00000544079 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
CCT4-204ENST00000544079 H3BS24 57 aa10.75□□□□□ -0.69
CCT4-204ENST00000544079 MEGF8Q7Z7M0 2845 aa10.71□□□□□ -0.7
CCT4-204ENST00000544079 MGAM2Q2M2H8 2515 aa10.71□□□□□ -0.7
CCT4-204ENST00000544079 FAM229AH3BQW9 127 aa10.69□□□□□ -0.7
CCT4-204ENST00000544079 PANO1I0J062 215 aa10.67□□□□□ -0.7
CCT4-204ENST00000544079 IGKV2-30P06310 120 aa10.65□□□□□ -0.7
CCT4-204ENST00000544079 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.7
CCT4-204ENST00000544079 CSAG1Q6PB30 78 aa10.65□□□□□ -0.7
CCT4-204ENST00000544079 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
CCT4-204ENST00000544079 DNAH10Q8IVF4 4471 aa10.61□□□□□ -0.71
CCT4-204ENST00000544079 SPINK6Q6UWN8 80 aa10.6□□□□□ -0.71
CCT4-204ENST00000544079 DNAH3Q8TD57 4116 aa10.6□□□□□ -0.71
CCT4-204ENST00000544079 ZNF861PO60384 105 aa10.59□□□□□ -0.71
CCT4-204ENST00000544079 IGLV5-52A0A0A0MRZ9 124 aa10.58□□□□□ -0.72
CCT4-204ENST00000544079 TGP01266 2768 aa10.57□□□□□ -0.72
CCT4-204ENST00000544079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
CCT4-204ENST00000544079 IGLV7-43P04211 117 aa10.55□□□□□ -0.72
CCT4-204ENST00000544079 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
CCT4-204ENST00000544079 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
CCT4-204ENST00000544079 LYSTQ99698 3801 aa10.53□□□□□ -0.72
CCT4-204ENST00000544079 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
CCT4-204ENST00000544079 Q6ZRN7 208 aaPredicted RBP10.5□□□□□ -0.73
CCT4-204ENST00000544079 CMYA5Q8N3K9 4069 aa10.49□□□□□ -0.73
CCT4-204ENST00000544079 SSBP3-AS1Q7Z2R9 100 aa10.49□□□□□ -0.73
CCT4-204ENST00000544079 DNAH9Q9NYC9 4486 aa10.48□□□□□ -0.73
CCT4-204ENST00000544079 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
CCT4-204ENST00000544079 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.74
CCT4-204ENST00000544079 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
CCT4-204ENST00000544079 IGKV2D-30A0A075B6S6 120 aa10.45□□□□□ -0.74
CCT4-204ENST00000544079 CIRBP-AS1Q8TBR5 109 aa10.44□□□□□ -0.74
CCT4-204ENST00000544079 PRKDCP78527 4128 aaKnown RBP10.44□□□□□ -0.74
CCT4-204ENST00000544079 CSMD3Q7Z407 3707 aa10.41□□□□□ -0.74
CCT4-204ENST00000544079 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.74
CCT4-204ENST00000544079 LY6G6CO95867 125 aa10.37□□□□□ -0.75
CCT4-204ENST00000544079 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
CCT4-204ENST00000544079 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
CCT4-204ENST00000544079 A8MUU9 505 aa10.37□□□□□ -0.75
CCT4-204ENST00000544079 DNAH8Q96JB1 4490 aa10.34□□□□□ -0.75
CCT4-204ENST00000544079 A0A087WTM6 91 aa10.32□□□□□ -0.76
CCT4-204ENST00000544079 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
CCT4-204ENST00000544079 ROMO1P60602 79 aa10.3□□□□□ -0.76
CCT4-204ENST00000544079 COL7A1Q02388 2944 aa10.27□□□□□ -0.77
CCT4-204ENST00000544079 Q6ZSA8 131 aa10.26□□□□□ -0.77
CCT4-204ENST00000544079 H0YAA0 97 aa10.25□□□□□ -0.77
CCT4-204ENST00000544079 LINC00304Q8N9R0 145 aa10.25□□□□□ -0.77
CCT4-204ENST00000544079 NUPR2A6NF83 97 aa10.18□□□□□ -0.78
CCT4-204ENST00000544079 SPINK1P00995 79 aa10.18□□□□□ -0.78
CCT4-204ENST00000544079 A0A1B0GU33 70 aa10.13□□□□□ -0.79
CCT4-204ENST00000544079 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
CCT4-204ENST00000544079 FRAS1Q86XX4 4008 aa10.12□□□□□ -0.79
CCT4-204ENST00000544079 HECTD4Q9Y4D8 3996 aa10.12□□□□□ -0.79
CCT4-204ENST00000544079 Q8N1X5 172 aa10.1□□□□□ -0.79
CCT4-204ENST00000544079 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
CCT4-204ENST00000544079 DNAH7Q8WXX0 4024 aa10.1□□□□□ -0.79
CCT4-204ENST00000544079 H1FX-AS1Q4G0G2 97 aa10.09□□□□□ -0.79
CCT4-204ENST00000544079 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
CCT4-204ENST00000544079 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
CCT4-204ENST00000544079 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
CCT4-204ENST00000544079 K7ERS5 55 aa10.04□□□□□ -0.8
CCT4-204ENST00000544079 PLECQ15149 4684 aaKnown RBP10.02□□□□□ -0.81
CCT4-204ENST00000544079 RYR3Q15413 4870 aa10.02□□□□□ -0.81
CCT4-204ENST00000544079 VPS13DQ5THJ4 4388 aa10.01□□□□□ -0.81
CCT4-204ENST00000544079 P0C880 135 aa9.95□□□□□ -0.82
CCT4-204ENST00000544079 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
CCT4-204ENST00000544079 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
CCT4-204ENST00000544079 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
CCT4-204ENST00000544079 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
CCT4-204ENST00000544079 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
CCT4-204ENST00000544079 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
CCT4-204ENST00000544079 C20orf166-AS1Q96NR2 134 aa9.78□□□□□ -0.84
CCT4-204ENST00000544079 RYR2Q92736 4967 aa9.78□□□□□ -0.84
CCT4-204ENST00000544079 DNAH11Q96DT5 4516 aa9.75□□□□□ -0.85
CCT4-204ENST00000544079 RPL37P61927 97 aaKnown RBP9.73□□□□□ -0.85
CCT4-204ENST00000544079 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
CCT4-204ENST00000544079 STARD9Q9P2P6 4700 aa9.7□□□□□ -0.86
CCT4-204ENST00000544079 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
CCT4-204ENST00000544079 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
CCT4-204ENST00000544079 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
CCT4-204ENST00000544079 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
CCT4-204ENST00000544079 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
CCT4-204ENST00000544079 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
CCT4-204ENST00000544079 TPRXLQ17RH7 258 aa9.65□□□□□ -0.86
CCT4-204ENST00000544079 KMT2AQ03164 3969 aa9.62□□□□□ -0.87
CCT4-204ENST00000544079 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
CCT4-204ENST00000544079 KRTAP15-1Q3LI76 137 aa9.61□□□□□ -0.87
CCT4-204ENST00000544079 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
CCT4-204ENST00000544079 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
CCT4-204ENST00000544079 LRP1BQ9NZR2 4599 aa9.54□□□□□ -0.88
CCT4-204ENST00000544079 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
CCT4-204ENST00000544079 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
CCT4-204ENST00000544079 NDUFAF8A1L188 74 aa9.5□□□□□ -0.89
CCT4-204ENST00000544079 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
CCT4-204ENST00000544079 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms