RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 PLAC4Q8WY50 150 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 TTTY13Q9BZ97 58 aa1.29□□□□□ -2.2
CHD4-209ENST00000542717 IGHV6-1A0A0B4J1U7 121 aa1.28□□□□□ -2.2
CHD4-209ENST00000542717 C8orf87E5RJ46 101 aa1.28□□□□□ -2.2
CHD4-209ENST00000542717 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
CHD4-209ENST00000542717 LYRM7Q5U5X0 104 aa1.28□□□□□ -2.2
CHD4-209ENST00000542717 YPEL4Q96NS1 127 aa1.28□□□□□ -2.2
CHD4-209ENST00000542717 SYS1-DBNDD2H3BUS1 97 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 PDE6GP18545 87 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 NDUFV3P56181 108 aaKnown RBP1.27□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP10-7P60409 375 aaPredicted RBP1.27□□□□□ -2.21
CHD4-209ENST00000542717 DEFB116Q30KQ4 102 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 BVES-AS1Q5T3Y7 98 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 LINC01545Q5VT33 79 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP19-3Q7Z4W3 81 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 C12orf57Q99622 126 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP9-9Q9BYP9 154 aa1.27□□□□□ -2.21
CHD4-209ENST00000542717 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 A0A1B0GVX0 72 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 H0YAA0 97 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 H3BMG7 143 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 TRGC2P03986 189 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 CSAG1Q6PB30 78 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 SVBPQ8N300 66 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 RAB37Q96AX2 223 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP4-11Q9BYQ6 195 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 LINC00472Q9H8W2 130 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 CRIPTQ9P021 101 aa1.26□□□□□ -2.21
CHD4-209ENST00000542717 LOC100996750A0A140TA64 210 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 SNCGO76070 127 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 SNAPINO95295 136 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 APOC3P02656 99 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 PET117Q6UWS5 81 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 DSCR8Q96T75 97 aa1.25□□□□□ -2.21
CHD4-209ENST00000542717 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
CHD4-209ENST00000542717 KRTAP10-12P60413 245 aa1.24□□□□□ -2.21
CHD4-209ENST00000542717 NDUFA5Q16718 116 aa1.24□□□□□ -2.21
CHD4-209ENST00000542717 ANKRD29Q8N6D5 301 aa1.24□□□□□ -2.21
CHD4-209ENST00000542717 H0YGX0 51 aa1.23□□□□□ -2.21
CHD4-209ENST00000542717 TRACP01848 142 aa1.23□□□□□ -2.21
CHD4-209ENST00000542717 CCKP06307 115 aa1.23□□□□□ -2.21
CHD4-209ENST00000542717 FABP2P12104 132 aa1.23□□□□□ -2.21
CHD4-209ENST00000542717 PP632Q6XCG6 107 aa1.23□□□□□ -2.21
CHD4-209ENST00000542717 A0A1B0GX51 115 aa1.22□□□□□ -2.21
CHD4-209ENST00000542717 J3KT08 172 aa1.22□□□□□ -2.21
CHD4-209ENST00000542717 S4R3F8 94 aa1.22□□□□□ -2.21
CHD4-209ENST00000542717 A0A1B0GV72 72 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 A8MUN3 132 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 H3BQ85 93 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 NDUFB1O75438 58 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 KRTDAPP60985 99 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 SNRPEP62304 92 aaKnown RBP1.21□□□□□ -2.22
CHD4-209ENST00000542717 C2orf91Q6ZV80 131 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 Q6ZVQ6 151 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 ATOH7Q8N100 152 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 C8orf17Q9NRJ1 99 aa1.21□□□□□ -2.22
CHD4-209ENST00000542717 IGKV2D-30A0A075B6S6 120 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 IGKV2-30P06310 120 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 MT1GP13640 62 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 Q5W150 140 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 C7orf65Q6ZTY9 151 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 ORMDL1Q9P0S3 153 aa1.2□□□□□ -2.22
CHD4-209ENST00000542717 A0A0B4J2C4 111 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 TMEM256-PLSCR3K7ERE1 68 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BKO60814 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 DNAL4O96015 105 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 MT1EP04732 61 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BJP06899 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BOP23527 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BBP33778 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BDP58876 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BCP62807 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST2H2BEQ16778 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 C21orf62-AS1Q17RA5 79 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 C4orf26Q17RF5 130 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.19□□□□□ -2.22
CHD4-209ENST00000542717 TMEM254Q8TBM7 123 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BHQ93079 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H4GQ99525 98 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BNQ99877 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 HIST1H2BMQ99879 126 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 MRPL34Q9BQ48 92 aaKnown RBP1.19□□□□□ -2.22
CHD4-209ENST00000542717 VPS25Q9BRG1 176 aa1.19□□□□□ -2.22
CHD4-209ENST00000542717 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
CHD4-209ENST00000542717 HSBP1L1C9JCN9 74 aa1.18□□□□□ -2.22
CHD4-209ENST00000542717 UBE2V1Q13404 147 aa1.18□□□□□ -2.22
CHD4-209ENST00000542717 Q6ZQT0 140 aa1.18□□□□□ -2.22
CHD4-209ENST00000542717 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 hDV103S1A0JD37 113 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 K7EQZ3 153 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 TRIAP1O43715 76 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 NDUFS5O43920 106 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 COA6Q5JTJ3 125 aaKnown RBP1.17□□□□□ -2.22
CHD4-209ENST00000542717 MT1MQ8N339 61 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP4-3Q9BYR4 195 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 KRTAP3-1Q9BYR8 98 aa1.17□□□□□ -2.22
CHD4-209ENST00000542717 TMEM238LA0A1B0GVL6 79 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms