RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 FAM236AA0A1B0GUQ0 79 aa15.88■□□□□ 0.13
CCM2-218ENST00000541586 FAM236BA0A1B0GV22 79 aa15.88■□□□□ 0.13
CCM2-218ENST00000541586 A8MWP4 228 aa15.85■□□□□ 0.13
CCM2-218ENST00000541586 RPS29P62273 56 aaKnown RBP15.82■□□□□ 0.12
CCM2-218ENST00000541586 C1orf195Q5TG92 126 aa15.8■□□□□ 0.12
CCM2-218ENST00000541586 PRR15Q8IV56 129 aa15.8■□□□□ 0.12
CCM2-218ENST00000541586 NDUFB1O75438 58 aa15.77■□□□□ 0.11
CCM2-218ENST00000541586 A0A1B0GVX0 72 aa15.7■□□□□ 0.1
CCM2-218ENST00000541586 RETNLBQ9BQ08 111 aa15.69■□□□□ 0.1
CCM2-218ENST00000541586 HCG22E2RYF7 251 aa15.68■□□□□ 0.1
CCM2-218ENST00000541586 IGHV6-1A0A0B4J1U7 121 aa15.67■□□□□ 0.1
CCM2-218ENST00000541586 ATOX1O00244 68 aa15.65■□□□□ 0.1
CCM2-218ENST00000541586 MMP24-AS1A0A0U1RRL7 71 aa15.62■□□□□ 0.09
CCM2-218ENST00000541586 WFDC13Q8IUB5 93 aa15.62■□□□□ 0.09
CCM2-218ENST00000541586 ANAPC13Q9BS18 74 aa15.62■□□□□ 0.09
CCM2-218ENST00000541586 PRR4Q16378 134 aa15.61■□□□□ 0.09
CCM2-218ENST00000541586 PCP4P48539 62 aa15.6■□□□□ 0.09
CCM2-218ENST00000541586 C8orf17Q9NRJ1 99 aa15.6■□□□□ 0.09
CCM2-218ENST00000541586 CASC2Q6XLA1 102 aa15.58■□□□□ 0.08
CCM2-218ENST00000541586 NOTCH2NLQ7Z3S9 236 aa15.57■□□□□ 0.08
CCM2-218ENST00000541586 hDV103S1A0JD37 113 aa15.53■□□□□ 0.08
CCM2-218ENST00000541586 C8orf87E5RJ46 101 aa15.49■□□□□ 0.07
CCM2-218ENST00000541586 HMCN2Q8NDA2 5059 aa15.48■□□□□ 0.07
CCM2-218ENST00000541586 LINC00313P59037 77 aa15.46■□□□□ 0.07
CCM2-218ENST00000541586 SMIM20Q8N5G0 67 aa15.46■□□□□ 0.07
CCM2-218ENST00000541586 SERP2Q8N6R1 65 aa15.45■□□□□ 0.06
CCM2-218ENST00000541586 OCR1Q9BZK8 76 aa15.45■□□□□ 0.06
CCM2-218ENST00000541586 IGLV7-46A0A075B6I9 117 aa15.43■□□□□ 0.06
CCM2-218ENST00000541586 TRAV7A0A075B6U4 112 aa15.43■□□□□ 0.06
CCM2-218ENST00000541586 TMEM254Q8TBM7 123 aa15.42■□□□□ 0.06
CCM2-218ENST00000541586 FP248Q71RG6 208 aaPredicted RBP15.4■□□□□ 0.06
CCM2-218ENST00000541586 MRPL34Q9BQ48 92 aaKnown RBP15.4■□□□□ 0.06
CCM2-218ENST00000541586 LPAP08519 4548 aa15.4■□□□□ 0.06
CCM2-218ENST00000541586 COX7CP15954 63 aa15.37■□□□□ 0.05
CCM2-218ENST00000541586 KRTAP16-1A8MUX0 517 aa15.32■□□□□ 0.04
CCM2-218ENST00000541586 UQCRQO14949 82 aa15.31■□□□□ 0.04
CCM2-218ENST00000541586 CCDC179H3BU77 68 aa15.3■□□□□ 0.04
CCM2-218ENST00000541586 NDUFS5O43920 106 aa15.29■□□□□ 0.04
CCM2-218ENST00000541586 LRP2P98164 4655 aa15.26■□□□□ 0.03
CCM2-218ENST00000541586 C9orf92A6NGG3 77 aa15.26■□□□□ 0.03
CCM2-218ENST00000541586 Q8N9P0 234 aaPredicted RBP15.23■□□□□ 0.03
CCM2-218ENST00000541586 TP53AIP1Q9HCN2 124 aa15.23■□□□□ 0.03
CCM2-218ENST00000541586 TPRXLQ17RH7 258 aa15.23■□□□□ 0.03
CCM2-218ENST00000541586 KRTAP13-3Q3SY46 172 aa15.19■□□□□ 0.02
CCM2-218ENST00000541586 C20orf197Q8N268 126 aa15.17■□□□□ 0.02
CCM2-218ENST00000541586 C5orf47Q569G3 176 aa15.17■□□□□ 0.02
CCM2-218ENST00000541586 TRAV22A0A0B4J277 110 aa15.11■□□□□ 0.01
CCM2-218ENST00000541586 H0Y9P7 68 aa15.1■□□□□ 0.01
CCM2-218ENST00000541586 SNURFQ9Y675 71 aa15.09■□□□□ 0.01
CCM2-218ENST00000541586 MP68P56378 58 aa15.07■□□□□ 0
CCM2-218ENST00000541586 Q5W150 140 aa15.07■□□□□ 0
CCM2-218ENST00000541586 A0A0U1RQV1 116 aa15.06■□□□□ 0
CCM2-218ENST00000541586 KLKP1Q107X0 134 aa15.06■□□□□ 0
CCM2-218ENST00000541586 C20orf166-AS1Q96NR2 134 aa15.05■□□□□ -0
CCM2-218ENST00000541586 CYSTM1Q9H1C7 97 aa15.05■□□□□ -0
CCM2-218ENST00000541586 A8MUU9 505 aa15.03■□□□□ -0
CCM2-218ENST00000541586 LINC00208Q96KT6 92 aa15.01□□□□□ -0.01
CCM2-218ENST00000541586 XP32Q5T750 250 aa15□□□□□ -0.01
CCM2-218ENST00000541586 UBR4Q5T4S7 5183 aa14.98□□□□□ -0.01
CCM2-218ENST00000541586 H3BPC8 53 aa14.97□□□□□ -0.01
CCM2-218ENST00000541586 ZCCHC13Q8WW36 166 aaKnown RBP14.97□□□□□ -0.01
CCM2-218ENST00000541586 C1orf64Q8NEQ6 169 aa14.95□□□□□ -0.02
CCM2-218ENST00000541586 Q75L30 129 aa14.94□□□□□ -0.02
CCM2-218ENST00000541586 H7BZZ5 65 aa14.86□□□□□ -0.03
CCM2-218ENST00000541586 NDUFC1O43677 76 aa14.84□□□□□ -0.03
CCM2-218ENST00000541586 LOC101927531A0A1B0GV80 90 aa14.83□□□□□ -0.04
CCM2-218ENST00000541586 RPL37P61927 97 aaKnown RBP14.81□□□□□ -0.04
CCM2-218ENST00000541586 MUC17Q685J3 4493 aa14.76□□□□□ -0.05
CCM2-218ENST00000541586 IGKV2-30P06310 120 aa14.76□□□□□ -0.05
CCM2-218ENST00000541586 SEC61BP60468 96 aaKnown RBP14.76□□□□□ -0.05
CCM2-218ENST00000541586 CYP4F30PQ9H0H9 118 aa14.75□□□□□ -0.05
CCM2-218ENST00000541586 ATP11AUNQ6ZP68 121 aa14.73□□□□□ -0.05
CCM2-218ENST00000541586 IGKV2D-30A0A075B6S6 120 aa14.71□□□□□ -0.05
CCM2-218ENST00000541586 PCOTHQ58A44 107 aa14.71□□□□□ -0.05
CCM2-218ENST00000541586 TMEM258P61165 79 aa14.7□□□□□ -0.06
CCM2-218ENST00000541586 RNF213Q63HN8 5207 aa14.66□□□□□ -0.06
CCM2-218ENST00000541586 MUC2Q02817 5179 aa14.64□□□□□ -0.07
CCM2-218ENST00000541586 C7orf65Q6ZTY9 151 aa14.63□□□□□ -0.07
CCM2-218ENST00000541586 FAM236DA0A1B0GTK5 79 aa14.58□□□□□ -0.08
CCM2-218ENST00000541586 FAM236CP0DP71 79 aa14.58□□□□□ -0.08
CCM2-218ENST00000541586 SPINK7P58062 85 aa14.55□□□□□ -0.08
CCM2-218ENST00000541586 SPANXA2-OT1Q8N9U9 137 aa14.54□□□□□ -0.08
CCM2-218ENST00000541586 HRES1P13985 223 aa14.52□□□□□ -0.09
CCM2-218ENST00000541586 KRTAP4-1Q9BYQ7 146 aa14.51□□□□□ -0.09
CCM2-218ENST00000541586 ATP5EP56381 51 aaPredicted RBP14.49□□□□□ -0.09
CCM2-218ENST00000541586 C4orf26Q17RF5 130 aa14.34□□□□□ -0.11
CCM2-218ENST00000541586 DMAC1Q96GE9 116 aa14.27□□□□□ -0.12
CCM2-218ENST00000541586 SERP1Q9Y6X1 66 aa14.24□□□□□ -0.13
CCM2-218ENST00000541586 ACYP2P14621 99 aa14.16□□□□□ -0.14
CCM2-218ENST00000541586 RPS28P62857 69 aaKnown RBP14.16□□□□□ -0.14
CCM2-218ENST00000541586 COX6B2Q6YFQ2 88 aa14.15□□□□□ -0.14
CCM2-218ENST00000541586 KRTAP3-1Q9BYR8 98 aa14.15□□□□□ -0.14
CCM2-218ENST00000541586 A8MUN3 132 aa14.12□□□□□ -0.15
CCM2-218ENST00000541586 COA5Q86WW8 74 aa14.12□□□□□ -0.15
CCM2-218ENST00000541586 FAT4Q6V0I7 4981 aa14.09□□□□□ -0.15
CCM2-218ENST00000541586 MPLKIPQ8TAP9 179 aa14.08□□□□□ -0.16
CCM2-218ENST00000541586 KRTAP19-2Q3LHN2 52 aa14□□□□□ -0.17
CCM2-218ENST00000541586 RBM12B-AS1Q9P1G2 102 aa13.98□□□□□ -0.17
CCM2-218ENST00000541586 CHKB-CPT1BH3BT56 60 aa13.94□□□□□ -0.18
CCM2-218ENST00000541586 LCE2CQ5TA81 110 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms