RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.93
CLPTM1-202ENST00000541297 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
CLPTM1-202ENST00000541297 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
CLPTM1-202ENST00000541297 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
CLPTM1-202ENST00000541297 SPRR1BP22528 89 aa9.19□□□□□ -0.94
CLPTM1-202ENST00000541297 RYR3Q15413 4870 aa9.19□□□□□ -0.94
CLPTM1-202ENST00000541297 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
CLPTM1-202ENST00000541297 SPANXA2-OT1Q8N9U9 137 aa9.16□□□□□ -0.94
CLPTM1-202ENST00000541297 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
CLPTM1-202ENST00000541297 Q5VV11 94 aa9.16□□□□□ -0.94
CLPTM1-202ENST00000541297 LINC00472Q9H8W2 130 aa9.16□□□□□ -0.94
CLPTM1-202ENST00000541297 A8MWP4 228 aa9.15□□□□□ -0.94
CLPTM1-202ENST00000541297 H3BPC8 53 aa9.14□□□□□ -0.95
CLPTM1-202ENST00000541297 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
CLPTM1-202ENST00000541297 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
CLPTM1-202ENST00000541297 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
CLPTM1-202ENST00000541297 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
CLPTM1-202ENST00000541297 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
CLPTM1-202ENST00000541297 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
CLPTM1-202ENST00000541297 SPTSSBQ8NFR3 76 aa9.09□□□□□ -0.95
CLPTM1-202ENST00000541297 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
CLPTM1-202ENST00000541297 PRR15LQ9BU68 103 aa9.08□□□□□ -0.96
CLPTM1-202ENST00000541297 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
CLPTM1-202ENST00000541297 LIMD2Q9BT23 127 aa9.08□□□□□ -0.96
CLPTM1-202ENST00000541297 MOBPQ13875 183 aa9.07□□□□□ -0.96
CLPTM1-202ENST00000541297 FAT1Q14517 4588 aa9.05□□□□□ -0.96
CLPTM1-202ENST00000541297 KTN1-AS1Q86SY8 53 aa9.05□□□□□ -0.96
CLPTM1-202ENST00000541297 COA5Q86WW8 74 aa9.04□□□□□ -0.96
CLPTM1-202ENST00000541297 IGLV7-46A0A075B6I9 117 aa9.03□□□□□ -0.96
CLPTM1-202ENST00000541297 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
CLPTM1-202ENST00000541297 A0A087X002 238 aa8.99□□□□□ -0.97
CLPTM1-202ENST00000541297 Q96NJ1 140 aa8.99□□□□□ -0.97
CLPTM1-202ENST00000541297 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CLPTM1-202ENST00000541297 Q75L30 129 aa8.97□□□□□ -0.97
CLPTM1-202ENST00000541297 LOC101927531A0A1B0GV80 90 aa8.96□□□□□ -0.98
CLPTM1-202ENST00000541297 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.98
CLPTM1-202ENST00000541297 A6NED7 52 aa8.95□□□□□ -0.98
CLPTM1-202ENST00000541297 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
CLPTM1-202ENST00000541297 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
CLPTM1-202ENST00000541297 TP53AIP1Q9HCN2 124 aa8.94□□□□□ -0.98
CLPTM1-202ENST00000541297 KRTAP13-2Q52LG2 175 aa8.94□□□□□ -0.98
CLPTM1-202ENST00000541297 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
CLPTM1-202ENST00000541297 NDUFS5O43920 106 aa8.92□□□□□ -0.98
CLPTM1-202ENST00000541297 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
CLPTM1-202ENST00000541297 PLA2G1BP04054 148 aaKnown RBP8.92□□□□□ -0.98
CLPTM1-202ENST00000541297 IGHV6-1A0A0B4J1U7 121 aa8.91□□□□□ -0.98
CLPTM1-202ENST00000541297 SPINK6Q6UWN8 80 aa8.91□□□□□ -0.98
CLPTM1-202ENST00000541297 HSPG2P98160 4391 aa8.9□□□□□ -0.98
CLPTM1-202ENST00000541297 KRTAP10-4P60372 401 aaPredicted RBP8.89□□□□□ -0.99
CLPTM1-202ENST00000541297 A6NN06 94 aa8.89□□□□□ -0.99
CLPTM1-202ENST00000541297 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
CLPTM1-202ENST00000541297 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
CLPTM1-202ENST00000541297 LINC01558Q9Y6Z2 57 aa8.88□□□□□ -0.99
CLPTM1-202ENST00000541297 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
CLPTM1-202ENST00000541297 HRES1P13985 223 aa8.86□□□□□ -0.99
CLPTM1-202ENST00000541297 EPPK1P58107 5090 aaKnown RBP8.86□□□□□ -0.99
CLPTM1-202ENST00000541297 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
CLPTM1-202ENST00000541297 CDC42SE1Q9NRR8 79 aa8.85□□□□□ -0.99
CLPTM1-202ENST00000541297 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
CLPTM1-202ENST00000541297 CDK2AP2O75956 126 aa8.83□□□□□ -1
CLPTM1-202ENST00000541297 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
CLPTM1-202ENST00000541297 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
CLPTM1-202ENST00000541297 C8orf87E5RJ46 101 aa8.82□□□□□ -1
CLPTM1-202ENST00000541297 FAM229AH3BQW9 127 aa8.8□□□□□ -1
CLPTM1-202ENST00000541297 SPINK7P58062 85 aa8.8□□□□□ -1
CLPTM1-202ENST00000541297 RYR1P21817 5038 aa8.8□□□□□ -1
CLPTM1-202ENST00000541297 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
CLPTM1-202ENST00000541297 Q5VSD8 79 aa8.78□□□□□ -1
CLPTM1-202ENST00000541297 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
CLPTM1-202ENST00000541297 Q5W150 140 aa8.76□□□□□ -1.01
CLPTM1-202ENST00000541297 PKHD1L1Q86WI1 4243 aa8.75□□□□□ -1.01
CLPTM1-202ENST00000541297 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
CLPTM1-202ENST00000541297 PRAC1Q96KF2 57 aa8.74□□□□□ -1.01
CLPTM1-202ENST00000541297 H3BS24 57 aa8.74□□□□□ -1.01
CLPTM1-202ENST00000541297 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
CLPTM1-202ENST00000541297 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
CLPTM1-202ENST00000541297 KRTAP13-3Q3SY46 172 aa8.7□□□□□ -1.02
CLPTM1-202ENST00000541297 SPINK1P00995 79 aa8.68□□□□□ -1.02
CLPTM1-202ENST00000541297 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
CLPTM1-202ENST00000541297 LINC00313P59037 77 aa8.65□□□□□ -1.02
CLPTM1-202ENST00000541297 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
CLPTM1-202ENST00000541297 ACYP2P14621 99 aa8.64□□□□□ -1.03
CLPTM1-202ENST00000541297 TNXBP22105 4242 aa8.62□□□□□ -1.03
CLPTM1-202ENST00000541297 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
CLPTM1-202ENST00000541297 Q8N1X5 172 aa8.61□□□□□ -1.03
CLPTM1-202ENST00000541297 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
CLPTM1-202ENST00000541297 RETNLBQ9BQ08 111 aa8.58□□□□□ -1.04
CLPTM1-202ENST00000541297 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
CLPTM1-202ENST00000541297 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
CLPTM1-202ENST00000541297 KRTAP10-8P60410 259 aa8.52□□□□□ -1.04
CLPTM1-202ENST00000541297 LINC01554Q52M75 96 aa8.52□□□□□ -1.05
CLPTM1-202ENST00000541297 A0A1B0GU69 56 aa8.51□□□□□ -1.05
CLPTM1-202ENST00000541297 KRTAP4-5Q9BYR2 181 aa8.5□□□□□ -1.05
CLPTM1-202ENST00000541297 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
CLPTM1-202ENST00000541297 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
CLPTM1-202ENST00000541297 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CLPTM1-202ENST00000541297 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
CLPTM1-202ENST00000541297 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
CLPTM1-202ENST00000541297 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
CLPTM1-202ENST00000541297 MIR22HGQ0VDD5 57 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms