RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 RETNLBQ9BQ08 111 aa11.57□□□□□ -0.56
COPS7A-208ENST00000538410 K7EQZ3 153 aa11.57□□□□□ -0.56
COPS7A-208ENST00000538410 LRP2P98164 4655 aa11.55□□□□□ -0.56
COPS7A-208ENST00000538410 NDUFB1O75438 58 aa11.55□□□□□ -0.56
COPS7A-208ENST00000538410 HIST1H4AP62805 103 aaKnown RBP11.53□□□□□ -0.56
COPS7A-208ENST00000538410 PRR15Q8IV56 129 aa11.53□□□□□ -0.56
COPS7A-208ENST00000538410 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
COPS7A-208ENST00000538410 A0A1B0GVX0 72 aa11.52□□□□□ -0.57
COPS7A-208ENST00000538410 IGHV6-1A0A0B4J1U7 121 aa11.48□□□□□ -0.57
COPS7A-208ENST00000538410 A0A087WVE0 104 aa11.47□□□□□ -0.57
COPS7A-208ENST00000538410 FP248Q71RG6 208 aaPredicted RBP11.46□□□□□ -0.57
COPS7A-208ENST00000538410 C8orf17Q9NRJ1 99 aa11.42□□□□□ -0.58
COPS7A-208ENST00000538410 MMP24-AS1A0A0U1RRL7 71 aa11.41□□□□□ -0.58
COPS7A-208ENST00000538410 C8orf87E5RJ46 101 aa11.41□□□□□ -0.58
COPS7A-208ENST00000538410 NOTCH2NLQ7Z3S9 236 aa11.41□□□□□ -0.58
COPS7A-208ENST00000538410 PRR4Q16378 134 aa11.4□□□□□ -0.58
COPS7A-208ENST00000538410 HCG22E2RYF7 251 aa11.39□□□□□ -0.59
COPS7A-208ENST00000538410 LINC00313P59037 77 aa11.39□□□□□ -0.59
COPS7A-208ENST00000538410 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
COPS7A-208ENST00000538410 LPAP08519 4548 aa11.36□□□□□ -0.59
COPS7A-208ENST00000538410 WFDC13Q8IUB5 93 aa11.36□□□□□ -0.59
COPS7A-208ENST00000538410 CASC2Q6XLA1 102 aa11.35□□□□□ -0.59
COPS7A-208ENST00000538410 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
COPS7A-208ENST00000538410 FAM236AA0A1B0GUQ0 79 aa11.32□□□□□ -0.6
COPS7A-208ENST00000538410 FAM236BA0A1B0GV22 79 aa11.32□□□□□ -0.6
COPS7A-208ENST00000538410 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
COPS7A-208ENST00000538410 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
COPS7A-208ENST00000538410 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
COPS7A-208ENST00000538410 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
COPS7A-208ENST00000538410 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.6
COPS7A-208ENST00000538410 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.6
COPS7A-208ENST00000538410 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
COPS7A-208ENST00000538410 TPRXLQ17RH7 258 aa11.22□□□□□ -0.61
COPS7A-208ENST00000538410 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-208ENST00000538410 ATOX1O00244 68 aa11.18□□□□□ -0.62
COPS7A-208ENST00000538410 NDUFS5O43920 106 aa11.17□□□□□ -0.62
COPS7A-208ENST00000538410 C20orf166-AS1Q96NR2 134 aa11.15□□□□□ -0.62
COPS7A-208ENST00000538410 A8MUU9 505 aa11.14□□□□□ -0.63
COPS7A-208ENST00000538410 XP32Q5T750 250 aa11.14□□□□□ -0.63
COPS7A-208ENST00000538410 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
COPS7A-208ENST00000538410 SMIM20Q8N5G0 67 aa11.11□□□□□ -0.63
COPS7A-208ENST00000538410 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
COPS7A-208ENST00000538410 Q75L30 129 aa11.09□□□□□ -0.63
COPS7A-208ENST00000538410 TRAV7A0A075B6U4 112 aa11.07□□□□□ -0.64
COPS7A-208ENST00000538410 UQCRQO14949 82 aa11.06□□□□□ -0.64
COPS7A-208ENST00000538410 RPL37P61927 97 aaKnown RBP11.05□□□□□ -0.64
COPS7A-208ENST00000538410 SERP2Q8N6R1 65 aa11.03□□□□□ -0.64
COPS7A-208ENST00000538410 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.64
COPS7A-208ENST00000538410 Q5W150 140 aa11□□□□□ -0.65
COPS7A-208ENST00000538410 ZCCHC13Q8WW36 166 aaKnown RBP10.99□□□□□ -0.65
COPS7A-208ENST00000538410 TRAV22A0A0B4J277 110 aa10.98□□□□□ -0.65
COPS7A-208ENST00000538410 C5orf47Q569G3 176 aa10.96□□□□□ -0.65
COPS7A-208ENST00000538410 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
COPS7A-208ENST00000538410 H0Y9P7 68 aa10.95□□□□□ -0.66
COPS7A-208ENST00000538410 COX7CP15954 63 aa10.95□□□□□ -0.66
COPS7A-208ENST00000538410 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
COPS7A-208ENST00000538410 MUC2Q02817 5179 aa10.94□□□□□ -0.66
COPS7A-208ENST00000538410 MP68P56378 58 aa10.91□□□□□ -0.66
COPS7A-208ENST00000538410 PCOTHQ58A44 107 aa10.86□□□□□ -0.67
COPS7A-208ENST00000538410 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
COPS7A-208ENST00000538410 MUC17Q685J3 4493 aa10.85□□□□□ -0.67
COPS7A-208ENST00000538410 H3BPC8 53 aa10.85□□□□□ -0.67
COPS7A-208ENST00000538410 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
COPS7A-208ENST00000538410 C20orf197Q8N268 126 aa10.84□□□□□ -0.67
COPS7A-208ENST00000538410 C1orf64Q8NEQ6 169 aa10.84□□□□□ -0.67
COPS7A-208ENST00000538410 LOC101927531A0A1B0GV80 90 aa10.8□□□□□ -0.68
COPS7A-208ENST00000538410 CCDC179H3BU77 68 aa10.8□□□□□ -0.68
COPS7A-208ENST00000538410 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
COPS7A-208ENST00000538410 PCP4P48539 62 aa10.79□□□□□ -0.68
COPS7A-208ENST00000538410 SNURFQ9Y675 71 aa10.79□□□□□ -0.68
COPS7A-208ENST00000538410 IGKV2D-30A0A075B6S6 120 aa10.78□□□□□ -0.68
COPS7A-208ENST00000538410 KLKP1Q107X0 134 aa10.76□□□□□ -0.69
COPS7A-208ENST00000538410 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
COPS7A-208ENST00000538410 CYP4F30PQ9H0H9 118 aa10.75□□□□□ -0.69
COPS7A-208ENST00000538410 SPINK7P58062 85 aa10.73□□□□□ -0.69
COPS7A-208ENST00000538410 FAT4Q6V0I7 4981 aa10.71□□□□□ -0.69
COPS7A-208ENST00000538410 LCE2AQ5TA79 106 aaPredicted RBP10.67□□□□□ -0.7
COPS7A-208ENST00000538410 CYSTM1Q9H1C7 97 aa10.66□□□□□ -0.7
COPS7A-208ENST00000538410 KRTAP4-1Q9BYQ7 146 aa10.62□□□□□ -0.71
COPS7A-208ENST00000538410 NDUFC1O43677 76 aa10.62□□□□□ -0.71
COPS7A-208ENST00000538410 H7BZZ5 65 aa10.58□□□□□ -0.72
COPS7A-208ENST00000538410 HRES1P13985 223 aa10.58□□□□□ -0.72
COPS7A-208ENST00000538410 C4orf26Q17RF5 130 aa10.51□□□□□ -0.73
COPS7A-208ENST00000538410 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
COPS7A-208ENST00000538410 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
COPS7A-208ENST00000538410 COX6B2Q6YFQ2 88 aa10.43□□□□□ -0.74
COPS7A-208ENST00000538410 RBM12B-AS1Q9P1G2 102 aa10.42□□□□□ -0.74
COPS7A-208ENST00000538410 TMEM258P61165 79 aa10.41□□□□□ -0.74
COPS7A-208ENST00000538410 KRTAP9-2Q9BYQ4 174 aa10.41□□□□□ -0.74
COPS7A-208ENST00000538410 KRTAP3-1Q9BYR8 98 aa10.38□□□□□ -0.75
COPS7A-208ENST00000538410 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
COPS7A-208ENST00000538410 FAM236DA0A1B0GTK5 79 aa10.35□□□□□ -0.75
COPS7A-208ENST00000538410 FAM236CP0DP71 79 aa10.35□□□□□ -0.75
COPS7A-208ENST00000538410 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
COPS7A-208ENST00000538410 A8MUN3 132 aa10.33□□□□□ -0.76
COPS7A-208ENST00000538410 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
COPS7A-208ENST00000538410 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
COPS7A-208ENST00000538410 ACYP2P14621 99 aa10.27□□□□□ -0.77
COPS7A-208ENST00000538410 H1FX-AS1Q4G0G2 97 aa10.25□□□□□ -0.77
COPS7A-208ENST00000538410 MT1HP80294 61 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms