RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 HRCT1Q6UXD1 115 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 ZNF706Q9Y5V0 76 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-208ENST00000538266 SNURFQ9Y675 71 aa2.6□□□□□ -1.99
SNHG1-208ENST00000538266 VPS13DQ5THJ4 4388 aa2.59□□□□□ -1.99
SNHG1-208ENST00000538266 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -1.99
SNHG1-208ENST00000538266 BPY2O14599 106 aa2.59□□□□□ -1.99
SNHG1-208ENST00000538266 KRTAP13-1Q8IUC0 172 aa2.59□□□□□ -1.99
SNHG1-208ENST00000538266 TMEM254Q8TBM7 123 aa2.59□□□□□ -1.99
SNHG1-208ENST00000538266 DHRS4-AS1Q9P1J3 65 aa2.59□□□□□ -1.99
SNHG1-208ENST00000538266 IGKV4-1P06312 121 aa2.58□□□□□ -2
SNHG1-208ENST00000538266 PRO0628Q9UI54 55 aa2.58□□□□□ -2
SNHG1-208ENST00000538266 PLECQ15149 4684 aaKnown RBP2.57□□□□□ -2
SNHG1-208ENST00000538266 A0A1B0GW54 56 aa2.57□□□□□ -2
SNHG1-208ENST00000538266 DSCR10P59022 87 aa2.57□□□□□ -2
SNHG1-208ENST00000538266 Q8N377 158 aa2.57□□□□□ -2
SNHG1-208ENST00000538266 Q9BRP9 147 aa2.57□□□□□ -2
SNHG1-208ENST00000538266 DNAH6Q9C0G6 4158 aa2.57□□□□□ -2
SNHG1-208ENST00000538266 FRAS1Q86XX4 4008 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 A0A0U1RQV1 116 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 FAM229BQ4G0N7 80 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 SPRR4Q96PI1 79 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 OCR1Q9BZK8 76 aa2.56□□□□□ -2
SNHG1-208ENST00000538266 HYDINQ4G0P3 5121 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 IGLV5-48A0A075B6I7 105 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 KRTAP1-4P0C5Y4 121 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 FP248Q71RG6 208 aaPredicted RBP2.55□□□□□ -2
SNHG1-208ENST00000538266 Q8N9L7 120 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 DEFB105AQ8NG35 78 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 ANAPC11Q9NYG5 84 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 HECTD4Q9Y4D8 3996 aa2.55□□□□□ -2
SNHG1-208ENST00000538266 LINC00483Q53H64 154 aa2.54□□□□□ -2
SNHG1-208ENST00000538266 ST20-AS1Q8NBB2 130 aa2.54□□□□□ -2
SNHG1-208ENST00000538266 TYMSOSQ8TAI1 123 aa2.54□□□□□ -2
SNHG1-208ENST00000538266 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
SNHG1-208ENST00000538266 RYR2Q92736 4967 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 PKHD1P08F94 4074 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 KRTAP10-5P60370 271 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 MOBPQ13875 183 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 PKD1P98161 4303 aa2.53□□□□□ -2
SNHG1-208ENST00000538266 A0A1W2PNM2 257 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 MT1HL1P0DM35 61 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 SPRR1BP22528 89 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 LINC00304Q8N9R0 145 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 SRRM2Q9UQ35 2752 aaKnown RBP2.52□□□□□ -2.01
SNHG1-208ENST00000538266 FAT2Q9NYQ8 4349 aa2.52□□□□□ -2.01
SNHG1-208ENST00000538266 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
SNHG1-208ENST00000538266 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
SNHG1-208ENST00000538266 DNAH2Q9P225 4427 aa2.51□□□□□ -2.01
SNHG1-208ENST00000538266 RYR3Q15413 4870 aa2.51□□□□□ -2.01
SNHG1-208ENST00000538266 DNAH10Q8IVF4 4471 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 hDV103S1A0JD37 113 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 NDUFB1O75438 58 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 SPAG11AQ6PDA7 123 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 SSBP3-AS1Q7Z2R9 100 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 ZCCHC13Q8WW36 166 aaKnown RBP2.5□□□□□ -2.01
SNHG1-208ENST00000538266 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
SNHG1-208ENST00000538266 K7EQZ3 153 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 SPINK1P00995 79 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 MP68P56378 58 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 Q1T7F1 81 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 C1orf195Q5TG92 126 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 CYP4F30PQ9H0H9 118 aa2.49□□□□□ -2.01
SNHG1-208ENST00000538266 H3BPC8 53 aa2.48□□□□□ -2.01
SNHG1-208ENST00000538266 LIMD2Q9BT23 127 aa2.48□□□□□ -2.01
SNHG1-208ENST00000538266 V9GYY9 64 aa2.48□□□□□ -2.01
SNHG1-208ENST00000538266 DMBT1Q9UGM3 2413 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-208ENST00000538266 IGLV8-61A0A075B6I0 122 aa2.47□□□□□ -2.01
SNHG1-208ENST00000538266 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
SNHG1-208ENST00000538266 CD164Q04900 197 aa2.47□□□□□ -2.01
SNHG1-208ENST00000538266 PRR15Q8IV56 129 aa2.47□□□□□ -2.01
SNHG1-208ENST00000538266 C1orf64Q8NEQ6 169 aa2.47□□□□□ -2.01
SNHG1-208ENST00000538266 TRAV22A0A0B4J277 110 aa2.46□□□□□ -2.02
SNHG1-208ENST00000538266 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
SNHG1-208ENST00000538266 IGFL1Q6UW32 110 aa2.46□□□□□ -2.02
SNHG1-208ENST00000538266 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
SNHG1-208ENST00000538266 A0A087WSZ3 146 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 H0Y9P7 68 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 PRR4Q16378 134 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 CASC2Q6XLA1 102 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 WFDC13Q8IUB5 93 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
SNHG1-208ENST00000538266 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
SNHG1-208ENST00000538266 A8MWP4 228 aa2.44□□□□□ -2.02
SNHG1-208ENST00000538266 LINC00208Q96KT6 92 aa2.44□□□□□ -2.02
SNHG1-208ENST00000538266 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
SNHG1-208ENST00000538266 PSPHP1O15172 72 aa2.43□□□□□ -2.02
SNHG1-208ENST00000538266 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-208ENST00000538266 HSPG2P98160 4391 aa2.43□□□□□ -2.02
SNHG1-208ENST00000538266 DNAH11Q96DT5 4516 aa2.43□□□□□ -2.02
SNHG1-208ENST00000538266 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
SNHG1-208ENST00000538266 A8MUN3 132 aa2.42□□□□□ -2.02
SNHG1-208ENST00000538266 MMP24-AS1A0A0U1RRL7 71 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 DEFB116Q30KQ4 102 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 705.8 ms