RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 C9orf118A6NHY6 69 aa4.32□□□□□ -1.72
SPARC-208ENST00000538026 C9JAW5 83 aa4.32□□□□□ -1.72
SPARC-208ENST00000538026 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
SPARC-208ENST00000538026 LINC00313P59037 77 aa4.32□□□□□ -1.72
SPARC-208ENST00000538026 ATP11AUNQ6ZP68 121 aa4.32□□□□□ -1.72
SPARC-208ENST00000538026 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
SPARC-208ENST00000538026 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SPARC-208ENST00000538026 USH2AO75445 5202 aa4.31□□□□□ -1.72
SPARC-208ENST00000538026 MTURNQ8N3F0 131 aa4.3□□□□□ -1.72
SPARC-208ENST00000538026 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
SPARC-208ENST00000538026 IGHV6-1A0A0B4J1U7 121 aa4.29□□□□□ -1.72
SPARC-208ENST00000538026 A0A1B0GVX0 72 aa4.29□□□□□ -1.72
SPARC-208ENST00000538026 A0A1W2PPM0 123 aa4.29□□□□□ -1.72
SPARC-208ENST00000538026 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
SPARC-208ENST00000538026 JMJD7-PLA2G4BH0Y9G9 81 aa4.28□□□□□ -1.72
SPARC-208ENST00000538026 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
SPARC-208ENST00000538026 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
SPARC-208ENST00000538026 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
SPARC-208ENST00000538026 HRES1P13985 223 aa4.25□□□□□ -1.73
SPARC-208ENST00000538026 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
SPARC-208ENST00000538026 A0A1B0GW54 56 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 H3BT86 120 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 J3KT08 172 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 PDE6GP18545 87 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
SPARC-208ENST00000538026 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
SPARC-208ENST00000538026 A8MWP4 228 aa4.23□□□□□ -1.73
SPARC-208ENST00000538026 C8orf17Q9NRJ1 99 aa4.23□□□□□ -1.73
SPARC-208ENST00000538026 PRO0461Q9UI25 63 aa4.23□□□□□ -1.73
SPARC-208ENST00000538026 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
SPARC-208ENST00000538026 M0R2T5 61 aa4.21□□□□□ -1.74
SPARC-208ENST00000538026 PRR15Q8IV56 129 aa4.21□□□□□ -1.74
SPARC-208ENST00000538026 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
SPARC-208ENST00000538026 SPCS1Q9Y6A9 102 aa4.21□□□□□ -1.74
SPARC-208ENST00000538026 NREPQ16612 68 aa4.2□□□□□ -1.74
SPARC-208ENST00000538026 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
SPARC-208ENST00000538026 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
SPARC-208ENST00000538026 COL5A1-AS1Q5SY13 56 aa4.19□□□□□ -1.74
SPARC-208ENST00000538026 K7EQZ3 153 aa4.18□□□□□ -1.74
SPARC-208ENST00000538026 NDUFB1O75438 58 aa4.18□□□□□ -1.74
SPARC-208ENST00000538026 K7EP34 96 aa4.17□□□□□ -1.74
SPARC-208ENST00000538026 SPINK7P58062 85 aa4.17□□□□□ -1.74
SPARC-208ENST00000538026 Q6ZVQ6 151 aa4.17□□□□□ -1.74
SPARC-208ENST00000538026 Q8N9L7 120 aa4.15□□□□□ -1.75
SPARC-208ENST00000538026 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
SPARC-208ENST00000538026 PCP4L1A6NKN8 68 aa4.14□□□□□ -1.75
SPARC-208ENST00000538026 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
SPARC-208ENST00000538026 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
SPARC-208ENST00000538026 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
SPARC-208ENST00000538026 BPY2O14599 106 aa4.13□□□□□ -1.75
SPARC-208ENST00000538026 MT2AP02795 61 aa4.13□□□□□ -1.75
SPARC-208ENST00000538026 Q5W150 140 aa4.13□□□□□ -1.75
SPARC-208ENST00000538026 hDV103S1A0JD37 113 aa4.12□□□□□ -1.75
SPARC-208ENST00000538026 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
SPARC-208ENST00000538026 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
SPARC-208ENST00000538026 MT1FP04733 61 aa4.11□□□□□ -1.75
SPARC-208ENST00000538026 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
SPARC-208ENST00000538026 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
SPARC-208ENST00000538026 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.75
SPARC-208ENST00000538026 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
SPARC-208ENST00000538026 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
SPARC-208ENST00000538026 F8W1H4 67 aa4.07□□□□□ -1.76
SPARC-208ENST00000538026 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
SPARC-208ENST00000538026 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
SPARC-208ENST00000538026 HCG22E2RYF7 251 aa4.05□□□□□ -1.76
SPARC-208ENST00000538026 NDUFS5O43920 106 aa4.05□□□□□ -1.76
SPARC-208ENST00000538026 UBL5Q9BZL1 73 aa4.04□□□□□ -1.76
SPARC-208ENST00000538026 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
SPARC-208ENST00000538026 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
SPARC-208ENST00000538026 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
SPARC-208ENST00000538026 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
SPARC-208ENST00000538026 H1FX-AS1Q4G0G2 97 aa4□□□□□ -1.77
SPARC-208ENST00000538026 CXCL6P80162 114 aa3.99□□□□□ -1.77
SPARC-208ENST00000538026 C7orf65Q6ZTY9 151 aa3.99□□□□□ -1.77
SPARC-208ENST00000538026 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
SPARC-208ENST00000538026 A0A1B0GV90 55 aa3.95□□□□□ -1.78
SPARC-208ENST00000538026 FAM240AA0A1B0GVK7 77 aa3.94□□□□□ -1.78
SPARC-208ENST00000538026 KRTAP19-1Q8IUB9 90 aa3.93□□□□□ -1.78
SPARC-208ENST00000538026 ACYP1P07311 99 aa3.92□□□□□ -1.78
SPARC-208ENST00000538026 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
SPARC-208ENST00000538026 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
SPARC-208ENST00000538026 CYP4F30PQ9H0H9 118 aa3.91□□□□□ -1.78
SPARC-208ENST00000538026 A0A087WVE0 104 aa3.89□□□□□ -1.79
SPARC-208ENST00000538026 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
SPARC-208ENST00000538026 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
SPARC-208ENST00000538026 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
SPARC-208ENST00000538026 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
SPARC-208ENST00000538026 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
SPARC-208ENST00000538026 LCA10Q71F78 164 aa3.87□□□□□ -1.79
SPARC-208ENST00000538026 PCP4P48539 62 aa3.86□□□□□ -1.79
SPARC-208ENST00000538026 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
SPARC-208ENST00000538026 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
SPARC-208ENST00000538026 TRAV22A0A0B4J277 110 aa3.85□□□□□ -1.79
SPARC-208ENST00000538026 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
SPARC-208ENST00000538026 S4R3F8 94 aa3.84□□□□□ -1.79
SPARC-208ENST00000538026 UQCRQO14949 82 aa3.82□□□□□ -1.8
SPARC-208ENST00000538026 OCR1Q9BZK8 76 aa3.82□□□□□ -1.8
SPARC-208ENST00000538026 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
SPARC-208ENST00000538026 H0Y9P7 68 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms