RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 Q6JHZ5 121 aa6.84□□□□□ -1.31
PRKDC-207ENST00000536483 Q6ZQT0 140 aa6.84□□□□□ -1.31
PRKDC-207ENST00000536483 TRBV7-4A0A0J9YYF1 115 aa6.83□□□□□ -1.32
PRKDC-207ENST00000536483 A0A1B0GV72 72 aa6.83□□□□□ -1.32
PRKDC-207ENST00000536483 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
PRKDC-207ENST00000536483 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
PRKDC-207ENST00000536483 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
PRKDC-207ENST00000536483 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
PRKDC-207ENST00000536483 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
PRKDC-207ENST00000536483 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
PRKDC-207ENST00000536483 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
PRKDC-207ENST00000536483 F8WEM9 126 aa6.78□□□□□ -1.32
PRKDC-207ENST00000536483 IGFL1Q6UW32 110 aa6.76□□□□□ -1.33
PRKDC-207ENST00000536483 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
PRKDC-207ENST00000536483 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
PRKDC-207ENST00000536483 CXCL6P80162 114 aa6.74□□□□□ -1.33
PRKDC-207ENST00000536483 MT1HP80294 61 aa6.73□□□□□ -1.33
PRKDC-207ENST00000536483 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
PRKDC-207ENST00000536483 HIST1H4AP62805 103 aaKnown RBP6.72□□□□□ -1.33
PRKDC-207ENST00000536483 ATOX1O00244 68 aa6.71□□□□□ -1.34
PRKDC-207ENST00000536483 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
PRKDC-207ENST00000536483 Q6ZVQ6 151 aa6.7□□□□□ -1.34
PRKDC-207ENST00000536483 IGKV3D-7A0A0C4DH55 119 aa6.69□□□□□ -1.34
PRKDC-207ENST00000536483 FAM236AA0A1B0GUQ0 79 aa6.69□□□□□ -1.34
PRKDC-207ENST00000536483 FAM236BA0A1B0GV22 79 aa6.69□□□□□ -1.34
PRKDC-207ENST00000536483 NREPQ16612 68 aa6.67□□□□□ -1.34
PRKDC-207ENST00000536483 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
PRKDC-207ENST00000536483 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
PRKDC-207ENST00000536483 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-207ENST00000536483 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-207ENST00000536483 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
PRKDC-207ENST00000536483 UQCRQO14949 82 aa6.63□□□□□ -1.35
PRKDC-207ENST00000536483 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
PRKDC-207ENST00000536483 BPY2O14599 106 aa6.61□□□□□ -1.35
PRKDC-207ENST00000536483 COX7CP15954 63 aa6.61□□□□□ -1.35
PRKDC-207ENST00000536483 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
PRKDC-207ENST00000536483 M0R2T5 61 aa6.59□□□□□ -1.35
PRKDC-207ENST00000536483 Q75L30 129 aa6.59□□□□□ -1.35
PRKDC-207ENST00000536483 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.36
PRKDC-207ENST00000536483 Q96NJ1 140 aa6.58□□□□□ -1.36
PRKDC-207ENST00000536483 A0A087WSZ3 146 aa6.57□□□□□ -1.36
PRKDC-207ENST00000536483 A0A087WVE0 104 aa6.57□□□□□ -1.36
PRKDC-207ENST00000536483 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
PRKDC-207ENST00000536483 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
PRKDC-207ENST00000536483 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
PRKDC-207ENST00000536483 C20orf166-AS1Q96NR2 134 aa6.54□□□□□ -1.36
PRKDC-207ENST00000536483 A8MUU9 505 aa6.52□□□□□ -1.37
PRKDC-207ENST00000536483 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
PRKDC-207ENST00000536483 J3KT08 172 aa6.51□□□□□ -1.37
PRKDC-207ENST00000536483 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
PRKDC-207ENST00000536483 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
PRKDC-207ENST00000536483 DSCR10P59022 87 aa6.47□□□□□ -1.37
PRKDC-207ENST00000536483 KRTAP16-1A8MUX0 517 aa6.44□□□□□ -1.38
PRKDC-207ENST00000536483 NDUFC1O43677 76 aa6.44□□□□□ -1.38
PRKDC-207ENST00000536483 LINC00313P59037 77 aa6.44□□□□□ -1.38
PRKDC-207ENST00000536483 KLKP1Q107X0 134 aa6.43□□□□□ -1.38
PRKDC-207ENST00000536483 A8MWP4 228 aa6.42□□□□□ -1.38
PRKDC-207ENST00000536483 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
PRKDC-207ENST00000536483 NDUFB1O75438 58 aa6.42□□□□□ -1.38
PRKDC-207ENST00000536483 TMEM258P61165 79 aa6.42□□□□□ -1.38
PRKDC-207ENST00000536483 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
PRKDC-207ENST00000536483 PRR15Q8IV56 129 aa6.41□□□□□ -1.38
PRKDC-207ENST00000536483 Q8N9L7 120 aa6.41□□□□□ -1.38
PRKDC-207ENST00000536483 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
PRKDC-207ENST00000536483 K7EQZ3 153 aa6.4□□□□□ -1.38
PRKDC-207ENST00000536483 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
PRKDC-207ENST00000536483 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
PRKDC-207ENST00000536483 USH2AO75445 5202 aa6.38□□□□□ -1.39
PRKDC-207ENST00000536483 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
PRKDC-207ENST00000536483 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
PRKDC-207ENST00000536483 DEFB116Q30KQ4 102 aa6.37□□□□□ -1.39
PRKDC-207ENST00000536483 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
PRKDC-207ENST00000536483 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
PRKDC-207ENST00000536483 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-207ENST00000536483 RPS28P62857 69 aaKnown RBP6.35□□□□□ -1.39
PRKDC-207ENST00000536483 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
PRKDC-207ENST00000536483 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
PRKDC-207ENST00000536483 H3BPC8 53 aa6.34□□□□□ -1.39
PRKDC-207ENST00000536483 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-207ENST00000536483 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PRKDC-207ENST00000536483 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
PRKDC-207ENST00000536483 H7BZZ5 65 aa6.31□□□□□ -1.4
PRKDC-207ENST00000536483 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
PRKDC-207ENST00000536483 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
PRKDC-207ENST00000536483 MP68P56378 58 aa6.29□□□□□ -1.4
PRKDC-207ENST00000536483 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-207ENST00000536483 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
PRKDC-207ENST00000536483 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
PRKDC-207ENST00000536483 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
PRKDC-207ENST00000536483 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
PRKDC-207ENST00000536483 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
PRKDC-207ENST00000536483 HRES1P13985 223 aa6.27□□□□□ -1.41
PRKDC-207ENST00000536483 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
PRKDC-207ENST00000536483 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
PRKDC-207ENST00000536483 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
PRKDC-207ENST00000536483 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
PRKDC-207ENST00000536483 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-207ENST00000536483 LCE2BO14633 110 aa6.23□□□□□ -1.41
PRKDC-207ENST00000536483 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
PRKDC-207ENST00000536483 SERP1Q9Y6X1 66 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms