RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 Q96NJ1 140 aa5.44□□□□□ -1.54
CSDE1-217ENST00000534699 A0A087WSZ3 146 aa5.44□□□□□ -1.54
CSDE1-217ENST00000534699 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
CSDE1-217ENST00000534699 C8orf87E5RJ46 101 aa5.43□□□□□ -1.54
CSDE1-217ENST00000534699 MUC2Q02817 5179 aa5.43□□□□□ -1.54
CSDE1-217ENST00000534699 J3KT08 172 aa5.42□□□□□ -1.54
CSDE1-217ENST00000534699 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-217ENST00000534699 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-217ENST00000534699 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
CSDE1-217ENST00000534699 LINC00313P59037 77 aa5.41□□□□□ -1.54
CSDE1-217ENST00000534699 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
CSDE1-217ENST00000534699 ATXN8Q156A1 80 aa5.4□□□□□ -1.54
CSDE1-217ENST00000534699 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
CSDE1-217ENST00000534699 PDE6GP18545 87 aa5.39□□□□□ -1.55
CSDE1-217ENST00000534699 C9JAW5 83 aa5.38□□□□□ -1.55
CSDE1-217ENST00000534699 RBM3P98179 157 aaKnown RBP5.38□□□□□ -1.55
CSDE1-217ENST00000534699 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
CSDE1-217ENST00000534699 M0R2T5 61 aa5.37□□□□□ -1.55
CSDE1-217ENST00000534699 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
CSDE1-217ENST00000534699 JMJD7-PLA2G4BH0Y9G9 81 aa5.36□□□□□ -1.55
CSDE1-217ENST00000534699 CCKP06307 115 aa5.36□□□□□ -1.55
CSDE1-217ENST00000534699 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
CSDE1-217ENST00000534699 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
CSDE1-217ENST00000534699 H3BT86 120 aa5.35□□□□□ -1.55
CSDE1-217ENST00000534699 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
CSDE1-217ENST00000534699 FAM240AA0A1B0GVK7 77 aa5.34□□□□□ -1.55
CSDE1-217ENST00000534699 DSCR10P59022 87 aa5.33□□□□□ -1.56
CSDE1-217ENST00000534699 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
CSDE1-217ENST00000534699 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
CSDE1-217ENST00000534699 LOC110117498A0A087WWA1 95 aa5.32□□□□□ -1.56
CSDE1-217ENST00000534699 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
CSDE1-217ENST00000534699 NDUFB1O75438 58 aa5.31□□□□□ -1.56
CSDE1-217ENST00000534699 SMIM20Q8N5G0 67 aa5.3□□□□□ -1.56
CSDE1-217ENST00000534699 ACYP1P07311 99 aa5.3□□□□□ -1.56
CSDE1-217ENST00000534699 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
CSDE1-217ENST00000534699 Q6ZQT0 140 aa5.29□□□□□ -1.56
CSDE1-217ENST00000534699 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
CSDE1-217ENST00000534699 IGHV6-1A0A0B4J1U7 121 aa5.27□□□□□ -1.57
CSDE1-217ENST00000534699 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-217ENST00000534699 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
CSDE1-217ENST00000534699 HRES1P13985 223 aa5.25□□□□□ -1.57
CSDE1-217ENST00000534699 A8MWP4 228 aa5.25□□□□□ -1.57
CSDE1-217ENST00000534699 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
CSDE1-217ENST00000534699 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
CSDE1-217ENST00000534699 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
CSDE1-217ENST00000534699 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-217ENST00000534699 LINC00643Q86TS7 51 aa5.23□□□□□ -1.57
CSDE1-217ENST00000534699 NOTCH2NLQ7Z3S9 236 aa5.22□□□□□ -1.57
CSDE1-217ENST00000534699 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.58
CSDE1-217ENST00000534699 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
CSDE1-217ENST00000534699 TMEM254Q8TBM7 123 aa5.2□□□□□ -1.58
CSDE1-217ENST00000534699 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
CSDE1-217ENST00000534699 DEFB116Q30KQ4 102 aa5.19□□□□□ -1.58
CSDE1-217ENST00000534699 NREPQ16612 68 aa5.18□□□□□ -1.58
CSDE1-217ENST00000534699 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
CSDE1-217ENST00000534699 FAM236AA0A1B0GUQ0 79 aa5.17□□□□□ -1.58
CSDE1-217ENST00000534699 FAM236BA0A1B0GV22 79 aa5.17□□□□□ -1.58
CSDE1-217ENST00000534699 UQCRQO14949 82 aa5.17□□□□□ -1.58
CSDE1-217ENST00000534699 SPINK7P58062 85 aa5.16□□□□□ -1.58
CSDE1-217ENST00000534699 Q6ZVQ6 151 aa5.16□□□□□ -1.58
CSDE1-217ENST00000534699 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
CSDE1-217ENST00000534699 HIST1H4AP62805 103 aaKnown RBP5.14□□□□□ -1.59
CSDE1-217ENST00000534699 MRPL34Q9BQ48 92 aaKnown RBP5.14□□□□□ -1.59
CSDE1-217ENST00000534699 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
CSDE1-217ENST00000534699 ATOX1O00244 68 aa5.13□□□□□ -1.59
CSDE1-217ENST00000534699 C5orf47Q569G3 176 aa5.13□□□□□ -1.59
CSDE1-217ENST00000534699 C14orf132Q9NPU4 83 aa5.13□□□□□ -1.59
CSDE1-217ENST00000534699 COX7CP15954 63 aa5.12□□□□□ -1.59
CSDE1-217ENST00000534699 MT2AP02795 61 aa5.11□□□□□ -1.59
CSDE1-217ENST00000534699 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
CSDE1-217ENST00000534699 hDV103S1A0JD37 113 aa5.1□□□□□ -1.59
CSDE1-217ENST00000534699 RPS28P62857 69 aaKnown RBP5.09□□□□□ -1.59
CSDE1-217ENST00000534699 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
CSDE1-217ENST00000534699 BPY2O14599 106 aa5.08□□□□□ -1.6
CSDE1-217ENST00000534699 SERP2Q8N6R1 65 aa5.07□□□□□ -1.6
CSDE1-217ENST00000534699 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
CSDE1-217ENST00000534699 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
CSDE1-217ENST00000534699 TMEM258P61165 79 aa5.05□□□□□ -1.6
CSDE1-217ENST00000534699 CXCL6P80162 114 aa5.05□□□□□ -1.6
CSDE1-217ENST00000534699 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
CSDE1-217ENST00000534699 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
CSDE1-217ENST00000534699 MT1FP04733 61 aa5.04□□□□□ -1.6
CSDE1-217ENST00000534699 K7EQZ3 153 aa5.02□□□□□ -1.61
CSDE1-217ENST00000534699 CASC2Q6XLA1 102 aa5.01□□□□□ -1.61
CSDE1-217ENST00000534699 UBL5Q9BZL1 73 aa5.01□□□□□ -1.61
CSDE1-217ENST00000534699 NDUFS5O43920 106 aa5□□□□□ -1.61
CSDE1-217ENST00000534699 A0A087WVE0 104 aa4.98□□□□□ -1.61
CSDE1-217ENST00000534699 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
CSDE1-217ENST00000534699 LCE2BO14633 110 aa4.97□□□□□ -1.61
CSDE1-217ENST00000534699 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-217ENST00000534699 C4orf26Q17RF5 130 aa4.96□□□□□ -1.62
CSDE1-217ENST00000534699 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
CSDE1-217ENST00000534699 HCG22E2RYF7 251 aa4.95□□□□□ -1.62
CSDE1-217ENST00000534699 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
CSDE1-217ENST00000534699 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
CSDE1-217ENST00000534699 Q5W150 140 aa4.93□□□□□ -1.62
CSDE1-217ENST00000534699 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
CSDE1-217ENST00000534699 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
CSDE1-217ENST00000534699 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
CSDE1-217ENST00000534699 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms