RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 A0A1W2PNM2 257 aa3.59□□□□□ -1.83
NXF1-215ENST00000533440 NDUFV3P56181 108 aaKnown RBP3.59□□□□□ -1.83
NXF1-215ENST00000533440 SNRPEP62304 92 aaKnown RBP3.59□□□□□ -1.83
NXF1-215ENST00000533440 ZCCHC13Q8WW36 166 aaKnown RBP3.59□□□□□ -1.83
NXF1-215ENST00000533440 MT1BP07438 61 aa3.58□□□□□ -1.84
NXF1-215ENST00000533440 WFDC13Q8IUB5 93 aa3.58□□□□□ -1.84
NXF1-215ENST00000533440 ATOH7Q8N100 152 aa3.58□□□□□ -1.84
NXF1-215ENST00000533440 FAM218AQ96MZ4 157 aa3.58□□□□□ -1.84
NXF1-215ENST00000533440 C12orf57Q99622 126 aa3.58□□□□□ -1.84
NXF1-215ENST00000533440 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
NXF1-215ENST00000533440 H3BMG7 143 aa3.57□□□□□ -1.84
NXF1-215ENST00000533440 LINC00472Q9H8W2 130 aa3.57□□□□□ -1.84
NXF1-215ENST00000533440 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
NXF1-215ENST00000533440 DEFB116Q30KQ4 102 aa3.56□□□□□ -1.84
NXF1-215ENST00000533440 TRBV7-4A0A0J9YYF1 115 aa3.55□□□□□ -1.84
NXF1-215ENST00000533440 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
NXF1-215ENST00000533440 PCP4P48539 62 aa3.55□□□□□ -1.84
NXF1-215ENST00000533440 HSBP1L1C9JCN9 74 aa3.54□□□□□ -1.84
NXF1-215ENST00000533440 RAB37Q96AX2 223 aa3.54□□□□□ -1.84
NXF1-215ENST00000533440 A0A1B0GVX0 72 aa3.53□□□□□ -1.84
NXF1-215ENST00000533440 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
NXF1-215ENST00000533440 H1FX-AS1Q4G0G2 97 aa3.53□□□□□ -1.84
NXF1-215ENST00000533440 Q5VV11 94 aa3.53□□□□□ -1.84
NXF1-215ENST00000533440 SNCGO76070 127 aa3.52□□□□□ -1.85
NXF1-215ENST00000533440 H0YGX0 51 aa3.51□□□□□ -1.85
NXF1-215ENST00000533440 S100A2P29034 98 aa3.51□□□□□ -1.85
NXF1-215ENST00000533440 HIST3H2BBQ8N257 126 aa3.51□□□□□ -1.85
NXF1-215ENST00000533440 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
NXF1-215ENST00000533440 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
NXF1-215ENST00000533440 FABP2P12104 132 aa3.5□□□□□ -1.85
NXF1-215ENST00000533440 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
NXF1-215ENST00000533440 HIST1H4GQ99525 98 aa3.5□□□□□ -1.85
NXF1-215ENST00000533440 HIST1H2BLQ99880 126 aa3.5□□□□□ -1.85
NXF1-215ENST00000533440 A0A1B0GX51 115 aa3.49□□□□□ -1.85
NXF1-215ENST00000533440 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
NXF1-215ENST00000533440 SPRR2EP22531 72 aa3.48□□□□□ -1.85
NXF1-215ENST00000533440 SPRR2BP35325 72 aa3.48□□□□□ -1.85
NXF1-215ENST00000533440 SPRR2AP35326 72 aa3.48□□□□□ -1.85
NXF1-215ENST00000533440 DLEU1O43261 78 aa3.47□□□□□ -1.85
NXF1-215ENST00000533440 TRACP01848 142 aa3.47□□□□□ -1.85
NXF1-215ENST00000533440 S100A6P06703 90 aa3.47□□□□□ -1.85
NXF1-215ENST00000533440 COX8AP10176 69 aa3.47□□□□□ -1.85
NXF1-215ENST00000533440 CCKP06307 115 aa3.46□□□□□ -1.86
NXF1-215ENST00000533440 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
NXF1-215ENST00000533440 A0A0B4J2C4 111 aa3.45□□□□□ -1.86
NXF1-215ENST00000533440 IGKV3D-7A0A0C4DH55 119 aa3.45□□□□□ -1.86
NXF1-215ENST00000533440 FAM236AA0A1B0GUQ0 79 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 FAM236BA0A1B0GV22 79 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 A0A1B0GV72 72 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 J3KT08 172 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 LYRM7Q5U5X0 104 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 HIGD1BQ9P298 99 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
NXF1-215ENST00000533440 S100A1P23297 94 aa3.42□□□□□ -1.86
NXF1-215ENST00000533440 C14orf144Q96I85 54 aa3.42□□□□□ -1.86
NXF1-215ENST00000533440 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
NXF1-215ENST00000533440 H3BQ85 93 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 NDUFB1O75438 58 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 SPATA45Q537H7 98 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 CEND1Q8N111 149 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 ORMDL1Q9P0S3 153 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 PRO1854Q9UHT4 67 aa3.41□□□□□ -1.86
NXF1-215ENST00000533440 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
NXF1-215ENST00000533440 IGKV2-30P06310 120 aa3.4□□□□□ -1.87
NXF1-215ENST00000533440 C2orf91Q6ZV80 131 aa3.4□□□□□ -1.87
NXF1-215ENST00000533440 PAM16Q9Y3D7 125 aa3.4□□□□□ -1.87
NXF1-215ENST00000533440 C5orf47Q569G3 176 aa3.39□□□□□ -1.87
NXF1-215ENST00000533440 Q6ZVQ6 151 aa3.39□□□□□ -1.87
NXF1-215ENST00000533440 VAMP8Q9BV40 100 aa3.39□□□□□ -1.87
NXF1-215ENST00000533440 DNAL4O96015 105 aa3.38□□□□□ -1.87
NXF1-215ENST00000533440 UBE2V1Q13404 147 aa3.38□□□□□ -1.87
NXF1-215ENST00000533440 VPS25Q9BRG1 176 aa3.38□□□□□ -1.87
NXF1-215ENST00000533440 IMUPQ9GZP8 106 aa3.38□□□□□ -1.87
NXF1-215ENST00000533440 SPRR2DP22532 72 aa3.37□□□□□ -1.87
NXF1-215ENST00000533440 FXYD2P54710 66 aa3.37□□□□□ -1.87
NXF1-215ENST00000533440 Q6ZQT0 140 aa3.37□□□□□ -1.87
NXF1-215ENST00000533440 COX6CP09669 75 aa3.36□□□□□ -1.87
NXF1-215ENST00000533440 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
NXF1-215ENST00000533440 IGKV2D-30A0A075B6S6 120 aa3.35□□□□□ -1.87
NXF1-215ENST00000533440 PSMB2P49721 201 aa3.35□□□□□ -1.87
NXF1-215ENST00000533440 RBM3P98179 157 aaKnown RBP3.35□□□□□ -1.87
NXF1-215ENST00000533440 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
NXF1-215ENST00000533440 HSD52Q0P140 79 aa3.34□□□□□ -1.87
NXF1-215ENST00000533440 CSAG1Q6PB30 78 aa3.34□□□□□ -1.87
NXF1-215ENST00000533440 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
NXF1-215ENST00000533440 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
NXF1-215ENST00000533440 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
NXF1-215ENST00000533440 MMP24-AS1A0A0U1RRL7 71 aa3.33□□□□□ -1.88
NXF1-215ENST00000533440 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
NXF1-215ENST00000533440 PRR15Q8IV56 129 aa3.33□□□□□ -1.88
NXF1-215ENST00000533440 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
NXF1-215ENST00000533440 C9JAW5 83 aa3.31□□□□□ -1.88
NXF1-215ENST00000533440 K7ERJ3 54 aa3.31□□□□□ -1.88
NXF1-215ENST00000533440 Q5W150 140 aa3.31□□□□□ -1.88
NXF1-215ENST00000533440 S4R3F8 94 aa3.31□□□□□ -1.88
NXF1-215ENST00000533440 LCA10Q71F78 164 aa3.3□□□□□ -1.88
NXF1-215ENST00000533440 A0A1B0GW54 56 aa3.29□□□□□ -1.88
NXF1-215ENST00000533440 hDV103S1A0JD37 113 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms