RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ASB16-AS1Q495Z4 193 aa12.51□□□□□ -0.41
PACSIN3-209ENST00000532457 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
PACSIN3-209ENST00000532457 IGKV4-1P06312 121 aa12.46□□□□□ -0.41
PACSIN3-209ENST00000532457 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.42
PACSIN3-209ENST00000532457 LIMD2Q9BT23 127 aa12.46□□□□□ -0.42
PACSIN3-209ENST00000532457 K7EQZ3 153 aa12.44□□□□□ -0.42
PACSIN3-209ENST00000532457 ATOX1O00244 68 aa12.43□□□□□ -0.42
PACSIN3-209ENST00000532457 J3KT08 172 aa12.41□□□□□ -0.42
PACSIN3-209ENST00000532457 A8MWP4 228 aa12.39□□□□□ -0.43
PACSIN3-209ENST00000532457 PRR15Q8IV56 129 aa12.36□□□□□ -0.43
PACSIN3-209ENST00000532457 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
PACSIN3-209ENST00000532457 CCDC179H3BU77 68 aa12.32□□□□□ -0.44
PACSIN3-209ENST00000532457 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
PACSIN3-209ENST00000532457 A0A1B0GVX0 72 aa12.3□□□□□ -0.44
PACSIN3-209ENST00000532457 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
PACSIN3-209ENST00000532457 NDUFB1O75438 58 aa12.29□□□□□ -0.44
PACSIN3-209ENST00000532457 COX7CP15954 63 aa12.27□□□□□ -0.44
PACSIN3-209ENST00000532457 SERP2Q8N6R1 65 aa12.27□□□□□ -0.45
PACSIN3-209ENST00000532457 UQCRQO14949 82 aa12.26□□□□□ -0.45
PACSIN3-209ENST00000532457 MMP24-AS1A0A0U1RRL7 71 aa12.23□□□□□ -0.45
PACSIN3-209ENST00000532457 C8orf17Q9NRJ1 99 aa12.23□□□□□ -0.45
PACSIN3-209ENST00000532457 HCG22E2RYF7 251 aa12.21□□□□□ -0.45
PACSIN3-209ENST00000532457 WFDC13Q8IUB5 93 aa12.21□□□□□ -0.46
PACSIN3-209ENST00000532457 SMIM20Q8N5G0 67 aa12.21□□□□□ -0.46
PACSIN3-209ENST00000532457 HMCN2Q8NDA2 5059 aa12.19□□□□□ -0.46
PACSIN3-209ENST00000532457 PRR4Q16378 134 aa12.18□□□□□ -0.46
PACSIN3-209ENST00000532457 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
PACSIN3-209ENST00000532457 CASC2Q6XLA1 102 aa12.16□□□□□ -0.46
PACSIN3-209ENST00000532457 LINC00313P59037 77 aa12.14□□□□□ -0.47
PACSIN3-209ENST00000532457 hDV103S1A0JD37 113 aa12.14□□□□□ -0.47
PACSIN3-209ENST00000532457 FP248Q71RG6 208 aaPredicted RBP12.14□□□□□ -0.47
PACSIN3-209ENST00000532457 C8orf87E5RJ46 101 aa12.11□□□□□ -0.47
PACSIN3-209ENST00000532457 KRTAP16-1A8MUX0 517 aa12.09□□□□□ -0.47
PACSIN3-209ENST00000532457 C9orf92A6NGG3 77 aa12.08□□□□□ -0.48
PACSIN3-209ENST00000532457 IGLV7-46A0A075B6I9 117 aa12.07□□□□□ -0.48
PACSIN3-209ENST00000532457 OCR1Q9BZK8 76 aa12.07□□□□□ -0.48
PACSIN3-209ENST00000532457 TMEM254Q8TBM7 123 aa12.05□□□□□ -0.48
PACSIN3-209ENST00000532457 MRPL34Q9BQ48 92 aaKnown RBP12.04□□□□□ -0.48
PACSIN3-209ENST00000532457 C20orf197Q8N268 126 aa12□□□□□ -0.49
PACSIN3-209ENST00000532457 CYSTM1Q9H1C7 97 aa11.98□□□□□ -0.49
PACSIN3-209ENST00000532457 TPRXLQ17RH7 258 aa11.97□□□□□ -0.49
PACSIN3-209ENST00000532457 LPAP08519 4548 aa11.97□□□□□ -0.49
PACSIN3-209ENST00000532457 LRP2P98164 4655 aa11.97□□□□□ -0.49
PACSIN3-209ENST00000532457 KRTAP13-3Q3SY46 172 aa11.97□□□□□ -0.49
PACSIN3-209ENST00000532457 Q8N9P0 234 aaPredicted RBP11.97□□□□□ -0.49
PACSIN3-209ENST00000532457 NDUFS5O43920 106 aa11.94□□□□□ -0.5
PACSIN3-209ENST00000532457 KLKP1Q107X0 134 aa11.94□□□□□ -0.5
PACSIN3-209ENST00000532457 SNURFQ9Y675 71 aa11.88□□□□□ -0.51
PACSIN3-209ENST00000532457 Q5W150 140 aa11.87□□□□□ -0.51
PACSIN3-209ENST00000532457 C20orf166-AS1Q96NR2 134 aa11.87□□□□□ -0.51
PACSIN3-209ENST00000532457 A8MUU9 505 aa11.86□□□□□ -0.51
PACSIN3-209ENST00000532457 A0A0U1RQV1 116 aa11.84□□□□□ -0.51
PACSIN3-209ENST00000532457 TMEM258P61165 79 aa11.84□□□□□ -0.51
PACSIN3-209ENST00000532457 XP32Q5T750 250 aa11.84□□□□□ -0.51
PACSIN3-209ENST00000532457 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
PACSIN3-209ENST00000532457 C5orf47Q569G3 176 aa11.83□□□□□ -0.52
PACSIN3-209ENST00000532457 H7BZZ5 65 aa11.81□□□□□ -0.52
PACSIN3-209ENST00000532457 NDUFC1O43677 76 aa11.8□□□□□ -0.52
PACSIN3-209ENST00000532457 Q75L30 129 aa11.78□□□□□ -0.52
PACSIN3-209ENST00000532457 TRAV22A0A0B4J277 110 aa11.74□□□□□ -0.53
PACSIN3-209ENST00000532457 H0Y9P7 68 aa11.74□□□□□ -0.53
PACSIN3-209ENST00000532457 UBR4Q5T4S7 5183 aa11.74□□□□□ -0.53
PACSIN3-209ENST00000532457 ZCCHC13Q8WW36 166 aaKnown RBP11.73□□□□□ -0.53
PACSIN3-209ENST00000532457 MP68P56378 58 aa11.72□□□□□ -0.53
PACSIN3-209ENST00000532457 RPL37P61927 97 aaKnown RBP11.71□□□□□ -0.54
PACSIN3-209ENST00000532457 LINC00208Q96KT6 92 aa11.68□□□□□ -0.54
PACSIN3-209ENST00000532457 H3BPC8 53 aa11.67□□□□□ -0.54
PACSIN3-209ENST00000532457 FAM236DA0A1B0GTK5 79 aa11.67□□□□□ -0.54
PACSIN3-209ENST00000532457 FAM236CP0DP71 79 aa11.67□□□□□ -0.54
PACSIN3-209ENST00000532457 C1orf64Q8NEQ6 169 aa11.65□□□□□ -0.55
PACSIN3-209ENST00000532457 SEC61BP60468 96 aaKnown RBP11.61□□□□□ -0.55
PACSIN3-209ENST00000532457 ATP11AUNQ6ZP68 121 aa11.6□□□□□ -0.55
PACSIN3-209ENST00000532457 ATP5EP56381 51 aaPredicted RBP11.59□□□□□ -0.55
PACSIN3-209ENST00000532457 RPS28P62857 69 aaKnown RBP11.56□□□□□ -0.56
PACSIN3-209ENST00000532457 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
PACSIN3-209ENST00000532457 PCOTHQ58A44 107 aa11.56□□□□□ -0.56
PACSIN3-209ENST00000532457 MUC17Q685J3 4493 aa11.55□□□□□ -0.56
PACSIN3-209ENST00000532457 CYP4F30PQ9H0H9 118 aa11.55□□□□□ -0.56
PACSIN3-209ENST00000532457 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
PACSIN3-209ENST00000532457 LOC101927531A0A1B0GV80 90 aa11.53□□□□□ -0.56
PACSIN3-209ENST00000532457 RNF213Q63HN8 5207 aa11.49□□□□□ -0.57
PACSIN3-209ENST00000532457 SERP1Q9Y6X1 66 aa11.47□□□□□ -0.57
PACSIN3-209ENST00000532457 SPINK7P58062 85 aa11.46□□□□□ -0.57
PACSIN3-209ENST00000532457 MUC2Q02817 5179 aa11.44□□□□□ -0.58
PACSIN3-209ENST00000532457 C7orf65Q6ZTY9 151 aa11.43□□□□□ -0.58
PACSIN3-209ENST00000532457 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
PACSIN3-209ENST00000532457 KRTAP4-1Q9BYQ7 146 aa11.37□□□□□ -0.59
PACSIN3-209ENST00000532457 HRES1P13985 223 aa11.36□□□□□ -0.59
PACSIN3-209ENST00000532457 C4orf26Q17RF5 130 aa11.28□□□□□ -0.6
PACSIN3-209ENST00000532457 SMIM26A0A096LP01 95 aa11.21□□□□□ -0.62
PACSIN3-209ENST00000532457 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
PACSIN3-209ENST00000532457 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
PACSIN3-209ENST00000532457 COX6B2Q6YFQ2 88 aa11.12□□□□□ -0.63
PACSIN3-209ENST00000532457 DMAC1Q96GE9 116 aa11.11□□□□□ -0.63
PACSIN3-209ENST00000532457 COA5Q86WW8 74 aa11.07□□□□□ -0.64
PACSIN3-209ENST00000532457 FAT4Q6V0I7 4981 aa11.06□□□□□ -0.64
PACSIN3-209ENST00000532457 KRTAP19-2Q3LHN2 52 aa11.02□□□□□ -0.64
PACSIN3-209ENST00000532457 ACYP2P14621 99 aa11□□□□□ -0.65
PACSIN3-209ENST00000532457 RBM12B-AS1Q9P1G2 102 aa11□□□□□ -0.65
PACSIN3-209ENST00000532457 A8MUN3 132 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms