RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 SSBP3-AS1Q7Z2R9 100 aa10.13□□□□□ -0.79
PCDHA6-202ENST00000527624 hDV103S1A0JD37 113 aa10.12□□□□□ -0.79
PCDHA6-202ENST00000527624 H3BPC8 53 aa10.12□□□□□ -0.79
PCDHA6-202ENST00000527624 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
PCDHA6-202ENST00000527624 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
PCDHA6-202ENST00000527624 C1orf64Q8NEQ6 169 aa10.1□□□□□ -0.79
PCDHA6-202ENST00000527624 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
PCDHA6-202ENST00000527624 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
PCDHA6-202ENST00000527624 SPINK6Q6UWN8 80 aa10.09□□□□□ -0.79
PCDHA6-202ENST00000527624 CD164Q04900 197 aa10.09□□□□□ -0.79
PCDHA6-202ENST00000527624 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
PCDHA6-202ENST00000527624 CDK2AP2O75956 126 aa10.07□□□□□ -0.8
PCDHA6-202ENST00000527624 PRR4Q16378 134 aa10.06□□□□□ -0.8
PCDHA6-202ENST00000527624 C8orf17Q9NRJ1 99 aa10.06□□□□□ -0.8
PCDHA6-202ENST00000527624 PRO0628Q9UI54 55 aa10.06□□□□□ -0.8
PCDHA6-202ENST00000527624 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
PCDHA6-202ENST00000527624 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
PCDHA6-202ENST00000527624 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
PCDHA6-202ENST00000527624 RYR3Q15413 4870 aa10.04□□□□□ -0.8
PCDHA6-202ENST00000527624 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
PCDHA6-202ENST00000527624 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.81
PCDHA6-202ENST00000527624 NOTCH2NLQ7Z3S9 236 aa10.01□□□□□ -0.81
PCDHA6-202ENST00000527624 APOBP04114 4563 aaKnown RBP10.01□□□□□ -0.81
PCDHA6-202ENST00000527624 FAT1Q14517 4588 aa9.98□□□□□ -0.81
PCDHA6-202ENST00000527624 TYMSOSQ8TAI1 123 aa9.97□□□□□ -0.81
PCDHA6-202ENST00000527624 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
PCDHA6-202ENST00000527624 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
PCDHA6-202ENST00000527624 NDUFS5O43920 106 aa9.94□□□□□ -0.82
PCDHA6-202ENST00000527624 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
PCDHA6-202ENST00000527624 Q1T7F1 81 aa9.92□□□□□ -0.82
PCDHA6-202ENST00000527624 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
PCDHA6-202ENST00000527624 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
PCDHA6-202ENST00000527624 LIMD2Q9BT23 127 aa9.89□□□□□ -0.83
PCDHA6-202ENST00000527624 IGLV7-46A0A075B6I9 117 aa9.88□□□□□ -0.83
PCDHA6-202ENST00000527624 PCOTHQ58A44 107 aa9.87□□□□□ -0.83
PCDHA6-202ENST00000527624 SPINK1P00995 79 aa9.84□□□□□ -0.83
PCDHA6-202ENST00000527624 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
PCDHA6-202ENST00000527624 C8orf87E5RJ46 101 aa9.83□□□□□ -0.84
PCDHA6-202ENST00000527624 LINC00313P59037 77 aa9.82□□□□□ -0.84
PCDHA6-202ENST00000527624 SEC61GP60059 68 aa9.81□□□□□ -0.84
PCDHA6-202ENST00000527624 BRK1Q8WUW1 75 aa9.81□□□□□ -0.84
PCDHA6-202ENST00000527624 V9GYY9 64 aa9.8□□□□□ -0.84
PCDHA6-202ENST00000527624 Q5W150 140 aa9.79□□□□□ -0.84
PCDHA6-202ENST00000527624 PSPHP1O15172 72 aa9.78□□□□□ -0.84
PCDHA6-202ENST00000527624 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
PCDHA6-202ENST00000527624 COA5Q86WW8 74 aa9.78□□□□□ -0.84
PCDHA6-202ENST00000527624 LOC101927531A0A1B0GV80 90 aa9.75□□□□□ -0.85
PCDHA6-202ENST00000527624 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
PCDHA6-202ENST00000527624 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
PCDHA6-202ENST00000527624 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
PCDHA6-202ENST00000527624 RPS29P62273 56 aaKnown RBP9.72□□□□□ -0.85
PCDHA6-202ENST00000527624 A8MUN3 132 aa9.71□□□□□ -0.85
PCDHA6-202ENST00000527624 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
PCDHA6-202ENST00000527624 Q5VSD8 79 aa9.69□□□□□ -0.86
PCDHA6-202ENST00000527624 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
PCDHA6-202ENST00000527624 HSPG2P98160 4391 aa9.69□□□□□ -0.86
PCDHA6-202ENST00000527624 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
PCDHA6-202ENST00000527624 PKHD1L1Q86WI1 4243 aa9.67□□□□□ -0.86
PCDHA6-202ENST00000527624 Q5VV11 94 aa9.66□□□□□ -0.86
PCDHA6-202ENST00000527624 RYR1P21817 5038 aa9.66□□□□□ -0.86
PCDHA6-202ENST00000527624 HRES1P13985 223 aa9.66□□□□□ -0.86
PCDHA6-202ENST00000527624 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
PCDHA6-202ENST00000527624 KRTAP17-1Q9BYP8 105 aa9.61□□□□□ -0.87
PCDHA6-202ENST00000527624 KIAA1109Q2LD37 5005 aa9.61□□□□□ -0.87
PCDHA6-202ENST00000527624 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
PCDHA6-202ENST00000527624 Q8N1X5 172 aa9.56□□□□□ -0.88
PCDHA6-202ENST00000527624 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
PCDHA6-202ENST00000527624 CHKB-CPT1BH3BT56 60 aa9.55□□□□□ -0.88
PCDHA6-202ENST00000527624 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
PCDHA6-202ENST00000527624 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
PCDHA6-202ENST00000527624 FLG2Q5D862 2391 aaPredicted RBP9.54□□□□□ -0.88
PCDHA6-202ENST00000527624 Q75L30 129 aa9.54□□□□□ -0.88
PCDHA6-202ENST00000527624 ACYP2P14621 99 aa9.53□□□□□ -0.88
PCDHA6-202ENST00000527624 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
PCDHA6-202ENST00000527624 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
PCDHA6-202ENST00000527624 PMAIP1Q13794 54 aa9.51□□□□□ -0.89
PCDHA6-202ENST00000527624 TNXBP22105 4242 aa9.49□□□□□ -0.89
PCDHA6-202ENST00000527624 IGKV2D-30A0A075B6S6 120 aa9.48□□□□□ -0.89
PCDHA6-202ENST00000527624 A8MU10 97 aa9.47□□□□□ -0.89
PCDHA6-202ENST00000527624 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
PCDHA6-202ENST00000527624 A6NED7 52 aa9.43□□□□□ -0.9
PCDHA6-202ENST00000527624 MYCBP2O75592 4640 aa9.43□□□□□ -0.9
PCDHA6-202ENST00000527624 FAT3Q8TDW7 4589 aa9.42□□□□□ -0.9
PCDHA6-202ENST00000527624 DMBT1Q9UGM3 2413 aaPredicted RBP9.42□□□□□ -0.9
PCDHA6-202ENST00000527624 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
PCDHA6-202ENST00000527624 A8MUU9 505 aa9.39□□□□□ -0.91
PCDHA6-202ENST00000527624 LCA10Q71F78 164 aa9.39□□□□□ -0.91
PCDHA6-202ENST00000527624 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
PCDHA6-202ENST00000527624 CDC42SE1Q9NRR8 79 aa9.34□□□□□ -0.91
PCDHA6-202ENST00000527624 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
PCDHA6-202ENST00000527624 SPINK7P58062 85 aa9.32□□□□□ -0.92
PCDHA6-202ENST00000527624 ATP11AUNQ6ZP68 121 aa9.29□□□□□ -0.92
PCDHA6-202ENST00000527624 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
PCDHA6-202ENST00000527624 KRTAP4-5Q9BYR2 181 aa9.26□□□□□ -0.93
PCDHA6-202ENST00000527624 HERC2O95714 4834 aa9.23□□□□□ -0.93
PCDHA6-202ENST00000527624 A0A1B0GU69 56 aa9.22□□□□□ -0.93
PCDHA6-202ENST00000527624 XP32Q5T750 250 aa9.17□□□□□ -0.94
PCDHA6-202ENST00000527624 KTN1-AS1Q86SY8 53 aa9.17□□□□□ -0.94
PCDHA6-202ENST00000527624 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
PCDHA6-202ENST00000527624 A6NN06 94 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms