RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 VPREB1P12018 145 aa6.92□□□□□ -1.3
CAPN1-204ENST00000526468 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
CAPN1-204ENST00000526468 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
CAPN1-204ENST00000526468 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
CAPN1-204ENST00000526468 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
CAPN1-204ENST00000526468 RPL37AP8A6NKH3 93 aa6.89□□□□□ -1.31
CAPN1-204ENST00000526468 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
CAPN1-204ENST00000526468 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
CAPN1-204ENST00000526468 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
CAPN1-204ENST00000526468 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
CAPN1-204ENST00000526468 UBE2AP49459 152 aa6.88□□□□□ -1.31
CAPN1-204ENST00000526468 MP68P56378 58 aa6.88□□□□□ -1.31
CAPN1-204ENST00000526468 SEC61GP60059 68 aa6.87□□□□□ -1.31
CAPN1-204ENST00000526468 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
CAPN1-204ENST00000526468 Q8NBF4 154 aa6.87□□□□□ -1.31
CAPN1-204ENST00000526468 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
CAPN1-204ENST00000526468 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
CAPN1-204ENST00000526468 IGLV5-37A0A075B6J1 123 aa6.86□□□□□ -1.31
CAPN1-204ENST00000526468 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
CAPN1-204ENST00000526468 ZCCHC13Q8WW36 166 aaKnown RBP6.86□□□□□ -1.31
CAPN1-204ENST00000526468 HCG22E2RYF7 251 aa6.85□□□□□ -1.31
CAPN1-204ENST00000526468 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
CAPN1-204ENST00000526468 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
CAPN1-204ENST00000526468 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
CAPN1-204ENST00000526468 Q8NDZ9 215 aa6.84□□□□□ -1.31
CAPN1-204ENST00000526468 PRLHP81277 87 aa6.83□□□□□ -1.32
CAPN1-204ENST00000526468 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
CAPN1-204ENST00000526468 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
CAPN1-204ENST00000526468 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
CAPN1-204ENST00000526468 Q6ZRX8 168 aa6.82□□□□□ -1.32
CAPN1-204ENST00000526468 Q9BRP9 147 aa6.82□□□□□ -1.32
CAPN1-204ENST00000526468 MPLKIPQ8TAP9 179 aa6.81□□□□□ -1.32
CAPN1-204ENST00000526468 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
CAPN1-204ENST00000526468 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
CAPN1-204ENST00000526468 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
CAPN1-204ENST00000526468 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
CAPN1-204ENST00000526468 SPRR1AP35321 89 aa6.79□□□□□ -1.32
CAPN1-204ENST00000526468 CD164Q04900 197 aa6.79□□□□□ -1.32
CAPN1-204ENST00000526468 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
CAPN1-204ENST00000526468 Q8N377 158 aa6.77□□□□□ -1.33
CAPN1-204ENST00000526468 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
CAPN1-204ENST00000526468 IGLV8-61A0A075B6I0 122 aa6.75□□□□□ -1.33
CAPN1-204ENST00000526468 NDUFS5O43920 106 aa6.75□□□□□ -1.33
CAPN1-204ENST00000526468 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
CAPN1-204ENST00000526468 A0A1W2PNM2 257 aa6.72□□□□□ -1.33
CAPN1-204ENST00000526468 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
CAPN1-204ENST00000526468 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
CAPN1-204ENST00000526468 Q8N9L7 120 aa6.71□□□□□ -1.34
CAPN1-204ENST00000526468 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
CAPN1-204ENST00000526468 DSCR10P59022 87 aa6.7□□□□□ -1.34
CAPN1-204ENST00000526468 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
CAPN1-204ENST00000526468 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
CAPN1-204ENST00000526468 C4orf48Q5BLP8 95 aa6.68□□□□□ -1.34
CAPN1-204ENST00000526468 SPAG11AQ6PDA7 123 aa6.68□□□□□ -1.34
CAPN1-204ENST00000526468 Q75L30 129 aa6.68□□□□□ -1.34
CAPN1-204ENST00000526468 KTN1-AS1Q86SY8 53 aa6.68□□□□□ -1.34
CAPN1-204ENST00000526468 LOC101927531A0A1B0GV80 90 aa6.67□□□□□ -1.34
CAPN1-204ENST00000526468 K7EQZ3 153 aa6.67□□□□□ -1.34
CAPN1-204ENST00000526468 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
CAPN1-204ENST00000526468 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
CAPN1-204ENST00000526468 H0Y9P7 68 aa6.64□□□□□ -1.35
CAPN1-204ENST00000526468 A8MWP4 228 aa6.63□□□□□ -1.35
CAPN1-204ENST00000526468 SPRR1BP22528 89 aa6.62□□□□□ -1.35
CAPN1-204ENST00000526468 MOBPQ13875 183 aa6.62□□□□□ -1.35
CAPN1-204ENST00000526468 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
CAPN1-204ENST00000526468 Q5VV11 94 aa6.62□□□□□ -1.35
CAPN1-204ENST00000526468 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
CAPN1-204ENST00000526468 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
CAPN1-204ENST00000526468 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
CAPN1-204ENST00000526468 CHKB-CPT1BH3BT56 60 aa6.6□□□□□ -1.35
CAPN1-204ENST00000526468 PSPHP1O15172 72 aa6.6□□□□□ -1.35
CAPN1-204ENST00000526468 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
CAPN1-204ENST00000526468 Q8N9P0 234 aaPredicted RBP6.6□□□□□ -1.35
CAPN1-204ENST00000526468 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
CAPN1-204ENST00000526468 SPINK1P00995 79 aa6.59□□□□□ -1.35
CAPN1-204ENST00000526468 A8MUN3 132 aa6.58□□□□□ -1.36
CAPN1-204ENST00000526468 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
CAPN1-204ENST00000526468 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
CAPN1-204ENST00000526468 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
CAPN1-204ENST00000526468 ST20-AS1Q8NBB2 130 aa6.57□□□□□ -1.36
CAPN1-204ENST00000526468 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
CAPN1-204ENST00000526468 LINC01558Q9Y6Z2 57 aa6.56□□□□□ -1.36
CAPN1-204ENST00000526468 A6NED7 52 aa6.55□□□□□ -1.36
CAPN1-204ENST00000526468 C7orf65Q6ZTY9 151 aa6.55□□□□□ -1.36
CAPN1-204ENST00000526468 A0A087WSZ3 146 aa6.54□□□□□ -1.36
CAPN1-204ENST00000526468 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
CAPN1-204ENST00000526468 COA5Q86WW8 74 aa6.53□□□□□ -1.36
CAPN1-204ENST00000526468 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
CAPN1-204ENST00000526468 XP32Q5T750 250 aa6.51□□□□□ -1.37
CAPN1-204ENST00000526468 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
CAPN1-204ENST00000526468 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
CAPN1-204ENST00000526468 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
CAPN1-204ENST00000526468 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
CAPN1-204ENST00000526468 A6NN06 94 aa6.47□□□□□ -1.37
CAPN1-204ENST00000526468 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
CAPN1-204ENST00000526468 LCA10Q71F78 164 aa6.45□□□□□ -1.38
CAPN1-204ENST00000526468 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
CAPN1-204ENST00000526468 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
CAPN1-204ENST00000526468 RBM12B-AS1Q9P1G2 102 aa6.43□□□□□ -1.38
CAPN1-204ENST00000526468 C9orf92A6NGG3 77 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms