RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 A0A1W2PNM2 257 aa7.42□□□□□ -1.22
CPSF1-201ENST00000526271 F8W1H4 67 aa7.42□□□□□ -1.22
CPSF1-201ENST00000526271 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
CPSF1-201ENST00000526271 TRBV7-7A0A0K0K1E9 115 aa7.41□□□□□ -1.22
CPSF1-201ENST00000526271 A0A1B0GV90 55 aa7.41□□□□□ -1.22
CPSF1-201ENST00000526271 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
CPSF1-201ENST00000526271 CCKP06307 115 aa7.38□□□□□ -1.23
CPSF1-201ENST00000526271 PDE6GP18545 87 aa7.38□□□□□ -1.23
CPSF1-201ENST00000526271 Q6ZQT0 140 aa7.38□□□□□ -1.23
CPSF1-201ENST00000526271 FCGBPQ9Y6R7 5405 aaPredicted RBP7.37□□□□□ -1.23
CPSF1-201ENST00000526271 C14orf132Q9NPU4 83 aa7.37□□□□□ -1.23
CPSF1-201ENST00000526271 A0A087WSZ3 146 aa7.34□□□□□ -1.23
CPSF1-201ENST00000526271 A0A1B0GW54 56 aa7.34□□□□□ -1.23
CPSF1-201ENST00000526271 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
CPSF1-201ENST00000526271 ETDBQ3ZM63 59 aa7.32□□□□□ -1.24
CPSF1-201ENST00000526271 VPS25Q9BRG1 176 aa7.32□□□□□ -1.24
CPSF1-201ENST00000526271 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
CPSF1-201ENST00000526271 LCE2BO14633 110 aa7.29□□□□□ -1.24
CPSF1-201ENST00000526271 Q75L30 129 aa7.29□□□□□ -1.24
CPSF1-201ENST00000526271 MT2AP02795 61 aa7.28□□□□□ -1.24
CPSF1-201ENST00000526271 Q96NJ1 140 aa7.28□□□□□ -1.24
CPSF1-201ENST00000526271 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
CPSF1-201ENST00000526271 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
CPSF1-201ENST00000526271 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
CPSF1-201ENST00000526271 MT1FP04733 61 aa7.24□□□□□ -1.25
CPSF1-201ENST00000526271 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
CPSF1-201ENST00000526271 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
CPSF1-201ENST00000526271 NREPQ16612 68 aa7.2□□□□□ -1.26
CPSF1-201ENST00000526271 DEFB116Q30KQ4 102 aa7.19□□□□□ -1.26
CPSF1-201ENST00000526271 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
CPSF1-201ENST00000526271 A8MUU9 505 aa7.18□□□□□ -1.26
CPSF1-201ENST00000526271 IGKV4-1P06312 121 aa7.18□□□□□ -1.26
CPSF1-201ENST00000526271 J3KT08 172 aa7.17□□□□□ -1.26
CPSF1-201ENST00000526271 LINC00846Q9NV44 126 aa7.17□□□□□ -1.26
CPSF1-201ENST00000526271 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
CPSF1-201ENST00000526271 Q6ZVQ6 151 aa7.15□□□□□ -1.26
CPSF1-201ENST00000526271 ACYP1P07311 99 aa7.14□□□□□ -1.27
CPSF1-201ENST00000526271 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
CPSF1-201ENST00000526271 FAM240AA0A1B0GVK7 77 aa7.13□□□□□ -1.27
CPSF1-201ENST00000526271 SIGMAR1Q99720 223 aa7.13□□□□□ -1.27
CPSF1-201ENST00000526271 UBL5Q9BZL1 73 aa7.12□□□□□ -1.27
CPSF1-201ENST00000526271 MPLKIPQ8TAP9 179 aa7.11□□□□□ -1.27
CPSF1-201ENST00000526271 A8MWP4 228 aa7.1□□□□□ -1.27
CPSF1-201ENST00000526271 DSCR10P59022 87 aa7.1□□□□□ -1.27
CPSF1-201ENST00000526271 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
CPSF1-201ENST00000526271 BPY2O14599 106 aa7.09□□□□□ -1.27
CPSF1-201ENST00000526271 HRES1P13985 223 aa7.09□□□□□ -1.27
CPSF1-201ENST00000526271 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
CPSF1-201ENST00000526271 NDUFB1O75438 58 aa7.08□□□□□ -1.28
CPSF1-201ENST00000526271 LINC00313P59037 77 aa7.08□□□□□ -1.28
CPSF1-201ENST00000526271 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
CPSF1-201ENST00000526271 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
CPSF1-201ENST00000526271 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
CPSF1-201ENST00000526271 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
CPSF1-201ENST00000526271 J3QR89 54 aa7.06□□□□□ -1.28
CPSF1-201ENST00000526271 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
CPSF1-201ENST00000526271 K7EQZ3 153 aa7.03□□□□□ -1.28
CPSF1-201ENST00000526271 CXCL6P80162 114 aa7.03□□□□□ -1.28
CPSF1-201ENST00000526271 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
CPSF1-201ENST00000526271 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
CPSF1-201ENST00000526271 Q8N9L7 120 aa6.99□□□□□ -1.29
CPSF1-201ENST00000526271 MMP24-AS1A0A0U1RRL7 71 aa6.98□□□□□ -1.29
CPSF1-201ENST00000526271 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
CPSF1-201ENST00000526271 K7ERU9 68 aa6.97□□□□□ -1.29
CPSF1-201ENST00000526271 FAM236DA0A1B0GTK5 79 aa6.96□□□□□ -1.3
CPSF1-201ENST00000526271 FAM236CP0DP71 79 aa6.96□□□□□ -1.3
CPSF1-201ENST00000526271 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.3
CPSF1-201ENST00000526271 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
CPSF1-201ENST00000526271 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
CPSF1-201ENST00000526271 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
CPSF1-201ENST00000526271 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
CPSF1-201ENST00000526271 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
CPSF1-201ENST00000526271 HCG22E2RYF7 251 aa6.9□□□□□ -1.3
CPSF1-201ENST00000526271 CASC2Q6XLA1 102 aa6.9□□□□□ -1.3
CPSF1-201ENST00000526271 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
CPSF1-201ENST00000526271 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
CPSF1-201ENST00000526271 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
CPSF1-201ENST00000526271 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
CPSF1-201ENST00000526271 A0A087WVE0 104 aa6.81□□□□□ -1.32
CPSF1-201ENST00000526271 NDUFS5O43920 106 aa6.81□□□□□ -1.32
CPSF1-201ENST00000526271 MT-ATP8P03928 68 aa6.8□□□□□ -1.32
CPSF1-201ENST00000526271 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
CPSF1-201ENST00000526271 SPINK7P58062 85 aa6.77□□□□□ -1.33
CPSF1-201ENST00000526271 Q5W150 140 aa6.77□□□□□ -1.33
CPSF1-201ENST00000526271 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
CPSF1-201ENST00000526271 NEBP20929 6669 aa6.76□□□□□ -1.33
CPSF1-201ENST00000526271 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
CPSF1-201ENST00000526271 UQCRQO14949 82 aa6.68□□□□□ -1.34
CPSF1-201ENST00000526271 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
CPSF1-201ENST00000526271 SCGB1A1P11684 91 aa6.64□□□□□ -1.35
CPSF1-201ENST00000526271 TRAV22A0A0B4J277 110 aa6.63□□□□□ -1.35
CPSF1-201ENST00000526271 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
CPSF1-201ENST00000526271 FAM236AA0A1B0GUQ0 79 aa6.62□□□□□ -1.35
CPSF1-201ENST00000526271 FAM236BA0A1B0GV22 79 aa6.62□□□□□ -1.35
CPSF1-201ENST00000526271 C7orf65Q6ZTY9 151 aa6.62□□□□□ -1.35
CPSF1-201ENST00000526271 IGKV2D-30A0A075B6S6 120 aa6.61□□□□□ -1.35
CPSF1-201ENST00000526271 H0Y9P7 68 aa6.59□□□□□ -1.35
CPSF1-201ENST00000526271 ATOX1O00244 68 aa6.59□□□□□ -1.35
CPSF1-201ENST00000526271 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
CPSF1-201ENST00000526271 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms