RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 H0Y9P7 68 aa13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 HRCT1Q6UXD1 115 aa13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 FP248Q71RG6 208 aaPredicted RBP13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 TP53AIP1Q9HCN2 124 aa13.5□□□□□ -0.25
NKX6-3-202ENST00000524115 ABCA13Q86UQ4 5058 aa13.48□□□□□ -0.25
NKX6-3-202ENST00000524115 Q96NJ1 140 aa13.48□□□□□ -0.25
NKX6-3-202ENST00000524115 Q8N1X5 172 aa13.47□□□□□ -0.25
NKX6-3-202ENST00000524115 LINC00208Q96KT6 92 aa13.47□□□□□ -0.25
NKX6-3-202ENST00000524115 SPANXA2-OT1Q8N9U9 137 aa13.46□□□□□ -0.26
NKX6-3-202ENST00000524115 ASB16-AS1Q495Z4 193 aa13.45□□□□□ -0.26
NKX6-3-202ENST00000524115 IGLV7-43P04211 117 aa13.44□□□□□ -0.26
NKX6-3-202ENST00000524115 CD164Q04900 197 aa13.41□□□□□ -0.26
NKX6-3-202ENST00000524115 C8orf17Q9NRJ1 99 aa13.41□□□□□ -0.26
NKX6-3-202ENST00000524115 A0A1B0GVX0 72 aa13.4□□□□□ -0.26
NKX6-3-202ENST00000524115 C1orf64Q8NEQ6 169 aa13.39□□□□□ -0.27
NKX6-3-202ENST00000524115 SSBP3-AS1Q7Z2R9 100 aa13.37□□□□□ -0.27
NKX6-3-202ENST00000524115 FAM229BQ4G0N7 80 aa13.35□□□□□ -0.27
NKX6-3-202ENST00000524115 FAT1Q14517 4588 aa13.34□□□□□ -0.27
NKX6-3-202ENST00000524115 SMR3BP02814 79 aaPredicted RBP13.31□□□□□ -0.28
NKX6-3-202ENST00000524115 IGHV6-1A0A0B4J1U7 121 aa13.3□□□□□ -0.28
NKX6-3-202ENST00000524115 MRPL34Q9BQ48 92 aaKnown RBP13.29□□□□□ -0.28
NKX6-3-202ENST00000524115 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
NKX6-3-202ENST00000524115 Q1T7F1 81 aa13.28□□□□□ -0.28
NKX6-3-202ENST00000524115 ANAPC11Q9NYG5 84 aa13.28□□□□□ -0.28
NKX6-3-202ENST00000524115 Q5VSD8 79 aa13.27□□□□□ -0.29
NKX6-3-202ENST00000524115 Q6ZSA8 131 aa13.27□□□□□ -0.29
NKX6-3-202ENST00000524115 MPLKIPQ8TAP9 179 aa13.27□□□□□ -0.29
NKX6-3-202ENST00000524115 V9GYY9 64 aa13.26□□□□□ -0.29
NKX6-3-202ENST00000524115 CIRBP-AS1Q8TBR5 109 aa13.25□□□□□ -0.29
NKX6-3-202ENST00000524115 C8orf87E5RJ46 101 aa13.22□□□□□ -0.29
NKX6-3-202ENST00000524115 FAM229AH3BQW9 127 aa13.21□□□□□ -0.29
NKX6-3-202ENST00000524115 IGLV7-46A0A075B6I9 117 aa13.21□□□□□ -0.3
NKX6-3-202ENST00000524115 PRR4Q16378 134 aa13.21□□□□□ -0.3
NKX6-3-202ENST00000524115 PRO0628Q9UI54 55 aa13.21□□□□□ -0.3
NKX6-3-202ENST00000524115 NDUFS5O43920 106 aa13.2□□□□□ -0.3
NKX6-3-202ENST00000524115 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
NKX6-3-202ENST00000524115 VPS13BQ7Z7G8 4022 aa13.17□□□□□ -0.3
NKX6-3-202ENST00000524115 C1orf195Q5TG92 126 aa13.15□□□□□ -0.31
NKX6-3-202ENST00000524115 LOC101927531A0A1B0GV80 90 aa13.11□□□□□ -0.31
NKX6-3-202ENST00000524115 SPINK6Q6UWN8 80 aa13.1□□□□□ -0.31
NKX6-3-202ENST00000524115 PLA2G1BP04054 148 aaKnown RBP13.08□□□□□ -0.32
NKX6-3-202ENST00000524115 FLG2Q5D862 2391 aaPredicted RBP13.05□□□□□ -0.32
NKX6-3-202ENST00000524115 MYCBP2O75592 4640 aa13.05□□□□□ -0.32
NKX6-3-202ENST00000524115 LIMD2Q9BT23 127 aa13.05□□□□□ -0.32
NKX6-3-202ENST00000524115 A0A087X002 238 aa13.04□□□□□ -0.32
NKX6-3-202ENST00000524115 NOTCH2NLQ7Z3S9 236 aa13.04□□□□□ -0.32
NKX6-3-202ENST00000524115 PCOTHQ58A44 107 aa13.03□□□□□ -0.32
NKX6-3-202ENST00000524115 BRK1Q8WUW1 75 aa13.02□□□□□ -0.33
NKX6-3-202ENST00000524115 COA5Q86WW8 74 aa13.01□□□□□ -0.33
NKX6-3-202ENST00000524115 LINC00313P59037 77 aa12.99□□□□□ -0.33
NKX6-3-202ENST00000524115 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
NKX6-3-202ENST00000524115 KRTAP13-2Q52LG2 175 aa12.99□□□□□ -0.33
NKX6-3-202ENST00000524115 KRTAP10-4P60372 401 aaPredicted RBP12.98□□□□□ -0.33
NKX6-3-202ENST00000524115 HERC1Q15751 4861 aa12.97□□□□□ -0.33
NKX6-3-202ENST00000524115 KRTAP13-3Q3SY46 172 aa12.96□□□□□ -0.34
NKX6-3-202ENST00000524115 Q8N9P0 234 aaPredicted RBP12.95□□□□□ -0.34
NKX6-3-202ENST00000524115 C4orf48Q5BLP8 95 aa12.91□□□□□ -0.34
NKX6-3-202ENST00000524115 PSPHP1O15172 72 aa12.9□□□□□ -0.34
NKX6-3-202ENST00000524115 KRTAP1-4P0C5Y4 121 aa12.9□□□□□ -0.34
NKX6-3-202ENST00000524115 Q5W150 140 aa12.88□□□□□ -0.35
NKX6-3-202ENST00000524115 J3QL48 77 aa12.86□□□□□ -0.35
NKX6-3-202ENST00000524115 A8MUN3 132 aa12.85□□□□□ -0.35
NKX6-3-202ENST00000524115 SPINK1P00995 79 aa12.85□□□□□ -0.35
NKX6-3-202ENST00000524115 TYMSOSQ8TAI1 123 aa12.82□□□□□ -0.36
NKX6-3-202ENST00000524115 Q5VV11 94 aa12.81□□□□□ -0.36
NKX6-3-202ENST00000524115 LRP1Q07954 4544 aaKnown RBP12.81□□□□□ -0.36
NKX6-3-202ENST00000524115 HRES1P13985 223 aa12.8□□□□□ -0.36
NKX6-3-202ENST00000524115 RPS29P62273 56 aaKnown RBP12.8□□□□□ -0.36
NKX6-3-202ENST00000524115 ACYP2P14621 99 aa12.79□□□□□ -0.36
NKX6-3-202ENST00000524115 PRR15LQ9BU68 103 aa12.78□□□□□ -0.36
NKX6-3-202ENST00000524115 LINC01558Q9Y6Z2 57 aa12.78□□□□□ -0.36
NKX6-3-202ENST00000524115 SPAG11AQ6PDA7 123 aa12.77□□□□□ -0.37
NKX6-3-202ENST00000524115 Q75L30 129 aa12.77□□□□□ -0.37
NKX6-3-202ENST00000524115 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
NKX6-3-202ENST00000524115 IGKV2-30P06310 120 aa12.75□□□□□ -0.37
NKX6-3-202ENST00000524115 FAT3Q8TDW7 4589 aa12.73□□□□□ -0.37
NKX6-3-202ENST00000524115 CHKB-CPT1BH3BT56 60 aa12.73□□□□□ -0.37
NKX6-3-202ENST00000524115 PKHD1L1Q86WI1 4243 aa12.71□□□□□ -0.37
NKX6-3-202ENST00000524115 DMAC1Q96GE9 116 aa12.7□□□□□ -0.38
NKX6-3-202ENST00000524115 LINC00304Q8N9R0 145 aa12.66□□□□□ -0.38
NKX6-3-202ENST00000524115 MT1HL1P0DM35 61 aa12.58□□□□□ -0.4
NKX6-3-202ENST00000524115 PRR26Q8N8Z3 221 aa12.58□□□□□ -0.4
NKX6-3-202ENST00000524115 A6NED7 52 aa12.57□□□□□ -0.4
NKX6-3-202ENST00000524115 RETNLBQ9BQ08 111 aa12.57□□□□□ -0.4
NKX6-3-202ENST00000524115 CDC42SE1Q9NRR8 79 aa12.5□□□□□ -0.41
NKX6-3-202ENST00000524115 IGKV2D-30A0A075B6S6 120 aa12.48□□□□□ -0.41
NKX6-3-202ENST00000524115 HMCN2Q8NDA2 5059 aa12.48□□□□□ -0.41
NKX6-3-202ENST00000524115 ATP11AUNQ6ZP68 121 aa12.47□□□□□ -0.41
NKX6-3-202ENST00000524115 C7orf65Q6ZTY9 151 aa12.45□□□□□ -0.42
NKX6-3-202ENST00000524115 TNXBP22105 4242 aa12.44□□□□□ -0.42
NKX6-3-202ENST00000524115 LCA10Q71F78 164 aa12.42□□□□□ -0.42
NKX6-3-202ENST00000524115 KRTAP10-8P60410 259 aa12.4□□□□□ -0.42
NKX6-3-202ENST00000524115 PMAIP1Q13794 54 aa12.35□□□□□ -0.43
NKX6-3-202ENST00000524115 C20orf166-AS1Q96NR2 134 aa12.34□□□□□ -0.43
NKX6-3-202ENST00000524115 A8MUU9 505 aa12.33□□□□□ -0.44
NKX6-3-202ENST00000524115 A0A1B0GU69 56 aa12.32□□□□□ -0.44
NKX6-3-202ENST00000524115 SPINK7P58062 85 aa12.3□□□□□ -0.44
NKX6-3-202ENST00000524115 A8MU10 97 aa12.29□□□□□ -0.44
NKX6-3-202ENST00000524115 SPTSSBQ8NFR3 76 aa12.29□□□□□ -0.44
NKX6-3-202ENST00000524115 UBR4Q5T4S7 5183 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms