RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NCR3O14931 201 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 LY6G6CO95867 125 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 BAALC-AS2P0C853 105 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 WFDC2Q14508 124 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 ETDBQ3ZM63 59 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 Q6ZRN7 208 aaPredicted RBP1.43□□□□□ -2.18
SKP1-212ENST00000523966 TEN1Q86WV5 123 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 C9orf163Q8N9P6 203 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 PPDPFLQ8WWR9 84 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 ORMDL1Q9P0S3 153 aa1.43□□□□□ -2.18
SKP1-212ENST00000523966 A0A087WTM6 91 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 JMJD7-PLA2G4BH0Y9G9 81 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 M0R2N4 97 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 PDE6GP18545 87 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 COX7BP24311 80 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.42□□□□□ -2.18
SKP1-212ENST00000523966 LINC00575Q6W349 94 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 Q8N814 137 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 SPACA4Q8TDM5 124 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 CLEC2BQ92478 149 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 DPH3Q96FX2 82 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 C22orf24Q9Y442 160 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 MEGF8Q7Z7M0 2845 aa1.42□□□□□ -2.18
SKP1-212ENST00000523966 A0A096LNI7 61 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 A8MUN3 132 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 ACYP1P07311 99 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 SPRR1AP35321 89 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 ELOF1P60002 83 aaKnown RBP1.41□□□□□ -2.18
SKP1-212ENST00000523966 Q6ZRX8 168 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 VPS25Q9BRG1 176 aa1.41□□□□□ -2.18
SKP1-212ENST00000523966 PRKDCP78527 4128 aaKnown RBP1.4□□□□□ -2.19
SKP1-212ENST00000523966 TEX49A0A1B0GTD5 131 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 UBE2BP63146 152 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 RBM3P98179 157 aaKnown RBP1.4□□□□□ -2.19
SKP1-212ENST00000523966 Q6ZQY7 126 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 OBSCN-AS1Q96MR7 158 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 DSCR8Q96T75 97 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 LAMTOR3Q9UHA4 124 aa1.4□□□□□ -2.19
SKP1-212ENST00000523966 HUWE1Q7Z6Z7 4374 aaKnown RBP1.4□□□□□ -2.19
SKP1-212ENST00000523966 LOC110117498A0A087WWA1 95 aa1.39□□□□□ -2.19
SKP1-212ENST00000523966 LCE6AA0A183 80 aa1.39□□□□□ -2.19
SKP1-212ENST00000523966 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
SKP1-212ENST00000523966 IGLV5-48A0A075B6I7 105 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 F8WEM9 126 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 BCE1O60756 84 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 CCKP06307 115 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 ATP5EP2Q5VTU8 51 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 Q6JHZ5 121 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 Q6ZSA8 131 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 PHF5AQ7RTV0 110 aaKnown RBP1.38□□□□□ -2.19
SKP1-212ENST00000523966 LINC00643Q86TS7 51 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 DEFB105AQ8NG35 78 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 UBL5Q9BZL1 73 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 IMUPQ9GZP8 106 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 C14orf132Q9NPU4 83 aa1.38□□□□□ -2.19
SKP1-212ENST00000523966 DNAH9Q9NYC9 4486 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 CSMD3Q7Z407 3707 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 TRBV7-4A0A0J9YYF1 115 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 SPRR1BP22528 89 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 RPL37AP61513 92 aaKnown RBP1.37□□□□□ -2.19
SKP1-212ENST00000523966 PRLHP81277 87 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 Q6ZQT0 140 aa1.37□□□□□ -2.19
SKP1-212ENST00000523966 DNHD1Q96M86 4753 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 ERC2-IT1O76042 136 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 RPS28P62857 69 aaKnown RBP1.36□□□□□ -2.19
SKP1-212ENST00000523966 NREPQ16612 68 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 C1orf137Q5JT78 98 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 Q6Q795 121 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 DNAH7Q8WXX0 4024 aa1.36□□□□□ -2.19
SKP1-212ENST00000523966 KMT2AQ03164 3969 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 TRBV7-7A0A0K0K1E9 115 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 MT-ATP8P03928 68 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 CRYGAP11844 174 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 Q5XG85 94 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 FP248Q71RG6 208 aaPredicted RBP1.35□□□□□ -2.19
SKP1-212ENST00000523966 SPRR4Q96PI1 79 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 LINC00846Q9NV44 126 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 GPR98Q8WXG9 6306 aa1.35□□□□□ -2.19
SKP1-212ENST00000523966 IGKV3D-7A0A0C4DH55 119 aa1.34□□□□□ -2.19
SKP1-212ENST00000523966 J3KT08 172 aa1.34□□□□□ -2.19
SKP1-212ENST00000523966 HAMPP81172 84 aa1.34□□□□□ -2.19
SKP1-212ENST00000523966 HRCT1Q6UXD1 115 aa1.34□□□□□ -2.19
SKP1-212ENST00000523966 SSBP3-AS1Q7Z2R9 100 aa1.34□□□□□ -2.19
SKP1-212ENST00000523966 DYNC2H1Q8NCM8 4307 aaKnown RBP1.34□□□□□ -2.2
SKP1-212ENST00000523966 LYSTQ99698 3801 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 DMBT1Q9UGM3 2413 aaPredicted RBP1.33□□□□□ -2.2
SKP1-212ENST00000523966 A0A087WSZ3 146 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 ATOX1O00244 68 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 Q1T7F1 81 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 C9orf153Q5TBE3 101 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 LCA10Q71F78 164 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
SKP1-212ENST00000523966 SRRM2Q9UQ35 2752 aaKnown RBP1.32□□□□□ -2.2
SKP1-212ENST00000523966 NDUFB1O75438 58 aa1.32□□□□□ -2.2
SKP1-212ENST00000523966 SPAG11AQ6PDA7 123 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms