RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 INE1O15225 51 aa3.65□□□□□ -1.83
SDC2-208ENST00000523877 DEFB131AP59861 70 aa3.65□□□□□ -1.83
SDC2-208ENST00000523877 CRIPTQ9P021 101 aa3.65□□□□□ -1.83
SDC2-208ENST00000523877 PRRC2CQ9Y520 2896 aaKnown RBP3.63□□□□□ -1.83
SDC2-208ENST00000523877 KRTAP24-1Q3LI83 254 aa3.63□□□□□ -1.83
SDC2-208ENST00000523877 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
SDC2-208ENST00000523877 MXRA5Q9NR99 2828 aa3.63□□□□□ -1.83
SDC2-208ENST00000523877 ACANP16112 2415 aa3.62□□□□□ -1.83
SDC2-208ENST00000523877 KRTAP10-9P60411 292 aa3.62□□□□□ -1.83
SDC2-208ENST00000523877 KAAG1Q9UBP8 84 aa3.62□□□□□ -1.83
SDC2-208ENST00000523877 GVQW2A0A096LPI5 108 aaPredicted RBP3.61□□□□□ -1.83
SDC2-208ENST00000523877 COX6B2Q6YFQ2 88 aa3.61□□□□□ -1.83
SDC2-208ENST00000523877 MRPL34Q9BQ48 92 aaKnown RBP3.61□□□□□ -1.83
SDC2-208ENST00000523877 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
SDC2-208ENST00000523877 PKD1L1Q8TDX9 2849 aa3.6□□□□□ -1.83
SDC2-208ENST00000523877 DEFB109BQ30KR1 87 aa3.6□□□□□ -1.83
SDC2-208ENST00000523877 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
SDC2-208ENST00000523877 RYR3Q15413 4870 aa3.6□□□□□ -1.83
SDC2-208ENST00000523877 MMP24-AS1A0A0U1RRL7 71 aa3.59□□□□□ -1.83
SDC2-208ENST00000523877 A8MTW9 85 aa3.59□□□□□ -1.83
SDC2-208ENST00000523877 KLK9Q2XQG4 91 aa3.59□□□□□ -1.83
SDC2-208ENST00000523877 FLNAP21333 2647 aaKnown RBP3.59□□□□□ -1.83
SDC2-208ENST00000523877 NOTCH1P46531 2555 aa3.58□□□□□ -1.84
SDC2-208ENST00000523877 ALMS1Q8TCU4 4167 aa3.57□□□□□ -1.84
SDC2-208ENST00000523877 H0YAA0 97 aa3.57□□□□□ -1.84
SDC2-208ENST00000523877 APELAP0DMC3 54 aa3.57□□□□□ -1.84
SDC2-208ENST00000523877 SMR3AQ99954 134 aa3.55□□□□□ -1.84
SDC2-208ENST00000523877 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 DEFB133Q30KQ1 61 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 C10orf99Q6UWK7 81 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 TLN2Q9Y4G6 2542 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 VPS13CQ709C8 3753 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 NBEAL2Q6ZNJ1 2754 aa3.54□□□□□ -1.84
SDC2-208ENST00000523877 TGP01266 2768 aa3.53□□□□□ -1.84
SDC2-208ENST00000523877 USMG5Q96IX5 58 aa3.53□□□□□ -1.84
SDC2-208ENST00000523877 PKDREJQ9NTG1 2253 aa3.52□□□□□ -1.85
SDC2-208ENST00000523877 DEFB105AQ8NG35 78 aa3.51□□□□□ -1.85
SDC2-208ENST00000523877 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.51□□□□□ -1.852e-7■■□□□ 11.4
SDC2-208ENST00000523877 ABCA1O95477 2261 aa3.51□□□□□ -1.85
SDC2-208ENST00000523877 SVEP1Q4LDE5 3571 aa3.5□□□□□ -1.85
SDC2-208ENST00000523877 HIVEP2P31629 2446 aa3.5□□□□□ -1.85
SDC2-208ENST00000523877 DEFB110Q30KQ9 67 aa3.5□□□□□ -1.85
SDC2-208ENST00000523877 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
SDC2-208ENST00000523877 Q6ZRN7 208 aaPredicted RBP3.5□□□□□ -1.85
SDC2-208ENST00000523877 Q6ZSA8 131 aa3.5□□□□□ -1.85
SDC2-208ENST00000523877 IGFL1Q6UW32 110 aa3.49□□□□□ -1.85
SDC2-208ENST00000523877 MAP1AP78559 2803 aaPredicted RBP3.49□□□□□ -1.85
SDC2-208ENST00000523877 CLPSL2Q6UWE3 100 aa3.48□□□□□ -1.85
SDC2-208ENST00000523877 UBE2DNLQ8IWF7 75 aa3.48□□□□□ -1.85
SDC2-208ENST00000523877 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
SDC2-208ENST00000523877 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
SDC2-208ENST00000523877 MGAM2Q2M2H8 2515 aa3.45□□□□□ -1.86
SDC2-208ENST00000523877 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
SDC2-208ENST00000523877 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
SDC2-208ENST00000523877 SPINK13Q1W4C9 94 aa3.44□□□□□ -1.86
SDC2-208ENST00000523877 KRTAP10-11P60412 298 aa3.43□□□□□ -1.86
SDC2-208ENST00000523877 DEFB130BP0DP73 79 aa3.42□□□□□ -1.86
SDC2-208ENST00000523877 DEFB130AP0DP74 79 aa3.42□□□□□ -1.86
SDC2-208ENST00000523877 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
SDC2-208ENST00000523877 TRRAPQ9Y4A5 3859 aa3.42□□□□□ -1.86
SDC2-208ENST00000523877 SONP18583 2426 aaKnown RBP3.42□□□□□ -1.86
SDC2-208ENST00000523877 ZANQ9Y493 2812 aa3.42□□□□□ -1.86
SDC2-208ENST00000523877 H3BUA1 57 aa3.41□□□□□ -1.86
SDC2-208ENST00000523877 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
SDC2-208ENST00000523877 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
SDC2-208ENST00000523877 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
SDC2-208ENST00000523877 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
SDC2-208ENST00000523877 RHPN1-AS1Q9BWJ2 59 aa3.39□□□□□ -1.87
SDC2-208ENST00000523877 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
SDC2-208ENST00000523877 HRNRQ86YZ3 2850 aaPredicted RBP3.38□□□□□ -1.87
SDC2-208ENST00000523877 WNK1Q9H4A3 2382 aa3.38□□□□□ -1.87
SDC2-208ENST00000523877 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
SDC2-208ENST00000523877 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
SDC2-208ENST00000523877 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
SDC2-208ENST00000523877 LYNX1P0DP58 116 aa3.37□□□□□ -1.87
SDC2-208ENST00000523877 SPRR1AP35321 89 aa3.37□□□□□ -1.87
SDC2-208ENST00000523877 DEFB1P60022 68 aa3.37□□□□□ -1.87
SDC2-208ENST00000523877 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
SDC2-208ENST00000523877 WNK2Q9Y3S1 2297 aa3.36□□□□□ -1.87
SDC2-208ENST00000523877 HERC2O95714 4834 aa3.35□□□□□ -1.87
SDC2-208ENST00000523877 TENM1Q9UKZ4 2725 aa3.34□□□□□ -1.88
SDC2-208ENST00000523877 RYR2Q92736 4967 aa3.33□□□□□ -1.88
SDC2-208ENST00000523877 LELP1Q5T871 98 aa3.33□□□□□ -1.88
SDC2-208ENST00000523877 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
SDC2-208ENST00000523877 PRLHP81277 87 aa3.32□□□□□ -1.88
SDC2-208ENST00000523877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
SDC2-208ENST00000523877 VWFP04275 2813 aa3.32□□□□□ -1.88
SDC2-208ENST00000523877 RYR1P21817 5038 aa3.31□□□□□ -1.88
SDC2-208ENST00000523877 K7EIL1 84 aa3.31□□□□□ -1.88
SDC2-208ENST00000523877 HTN1P15515 57 aa3.31□□□□□ -1.88
SDC2-208ENST00000523877 SPRR1BP22528 89 aa3.3□□□□□ -1.88
SDC2-208ENST00000523877 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
SDC2-208ENST00000523877 BRD3OSQ6XYD6 125 aa3.3□□□□□ -1.88
SDC2-208ENST00000523877 FLG2Q5D862 2391 aaPredicted RBP3.29□□□□□ -1.88
SDC2-208ENST00000523877 H3BUX3 64 aa3.28□□□□□ -1.88
SDC2-208ENST00000523877 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
SDC2-208ENST00000523877 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
SDC2-208ENST00000523877 TENM3Q9P273 2699 aa3.28□□□□□ -1.88
SDC2-208ENST00000523877 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SDC2-208ENST00000523877 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms