RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 DNAH11Q96DT5 4516 aa3.86□□□□□ -1.79
LINC00534-203ENST00000523406 ANAPC11Q9NYG5 84 aa3.86□□□□□ -1.79
LINC00534-203ENST00000523406 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
LINC00534-203ENST00000523406 SEC61GP60059 68 aa3.85□□□□□ -1.79
LINC00534-203ENST00000523406 HRCT1Q6UXD1 115 aa3.85□□□□□ -1.79
LINC00534-203ENST00000523406 HYDINQ4G0P3 5121 aa3.84□□□□□ -1.79
LINC00534-203ENST00000523406 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
LINC00534-203ENST00000523406 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
LINC00534-203ENST00000523406 Q8N9L7 120 aa3.84□□□□□ -1.79
LINC00534-203ENST00000523406 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.79
LINC00534-203ENST00000523406 DNAH5Q8TE73 4624 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 SMIM20Q8N5G0 67 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 FRAS1Q86XX4 4008 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 SACSQ9NZJ4 4579 aa3.83□□□□□ -1.8
LINC00534-203ENST00000523406 A0A1B0GVY2 172 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 CCDC179H3BU77 68 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 J3KT08 172 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 UQCRQO14949 82 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 COX7CP15954 63 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 SSBP3-AS1Q7Z2R9 100 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
LINC00534-203ENST00000523406 NDUFB1O75438 58 aa3.81□□□□□ -1.8
LINC00534-203ENST00000523406 FAM229BQ4G0N7 80 aa3.81□□□□□ -1.8
LINC00534-203ENST00000523406 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
LINC00534-203ENST00000523406 PKD1P98161 4303 aa3.81□□□□□ -1.8
LINC00534-203ENST00000523406 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
LINC00534-203ENST00000523406 TRAV7A0A075B6U4 112 aa3.8□□□□□ -1.8
LINC00534-203ENST00000523406 K7EQZ3 153 aa3.8□□□□□ -1.8
LINC00534-203ENST00000523406 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
LINC00534-203ENST00000523406 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
LINC00534-203ENST00000523406 A8MWP4 228 aa3.79□□□□□ -1.8
LINC00534-203ENST00000523406 CD164Q04900 197 aa3.79□□□□□ -1.8
LINC00534-203ENST00000523406 SPINK6Q6UWN8 80 aa3.79□□□□□ -1.8
LINC00534-203ENST00000523406 RYR2Q92736 4967 aa3.79□□□□□ -1.8
LINC00534-203ENST00000523406 HCG22E2RYF7 251 aa3.78□□□□□ -1.8
LINC00534-203ENST00000523406 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
LINC00534-203ENST00000523406 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
LINC00534-203ENST00000523406 LRP1BQ9NZR2 4599 aa3.77□□□□□ -1.81
LINC00534-203ENST00000523406 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
LINC00534-203ENST00000523406 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
LINC00534-203ENST00000523406 DYNC1H1Q14204 4646 aaKnown RBP3.77□□□□□ -1.81
LINC00534-203ENST00000523406 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
LINC00534-203ENST00000523406 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
LINC00534-203ENST00000523406 CASC2Q6XLA1 102 aa3.76□□□□□ -1.81
LINC00534-203ENST00000523406 BIRC6Q9NR09 4857 aa3.76□□□□□ -1.81
LINC00534-203ENST00000523406 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
LINC00534-203ENST00000523406 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
LINC00534-203ENST00000523406 C20orf197Q8N268 126 aa3.75□□□□□ -1.81
LINC00534-203ENST00000523406 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
LINC00534-203ENST00000523406 Q96NJ1 140 aa3.74□□□□□ -1.81
LINC00534-203ENST00000523406 LIMD2Q9BT23 127 aa3.74□□□□□ -1.81
LINC00534-203ENST00000523406 A0A1B0GVX0 72 aa3.73□□□□□ -1.81
LINC00534-203ENST00000523406 hDV103S1A0JD37 113 aa3.73□□□□□ -1.81
LINC00534-203ENST00000523406 ASB16-AS1Q495Z4 193 aa3.72□□□□□ -1.81
LINC00534-203ENST00000523406 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
LINC00534-203ENST00000523406 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
LINC00534-203ENST00000523406 PKHD1P08F94 4074 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 SPINK1P00995 79 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 Q5XG85 94 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 LINC00304Q8N9R0 145 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
LINC00534-203ENST00000523406 NDUFC1O43677 76 aa3.7□□□□□ -1.82
LINC00534-203ENST00000523406 NDUFS5O43920 106 aa3.7□□□□□ -1.82
LINC00534-203ENST00000523406 MP68P56378 58 aa3.7□□□□□ -1.82
LINC00534-203ENST00000523406 PRR4Q16378 134 aa3.7□□□□□ -1.82
LINC00534-203ENST00000523406 C1orf195Q5TG92 126 aa3.7□□□□□ -1.82
LINC00534-203ENST00000523406 VPS13BQ7Z7G8 4022 aa3.69□□□□□ -1.82
LINC00534-203ENST00000523406 C8orf87E5RJ46 101 aa3.69□□□□□ -1.82
LINC00534-203ENST00000523406 TMEM258P61165 79 aa3.69□□□□□ -1.82
LINC00534-203ENST00000523406 KLKP1Q107X0 134 aa3.69□□□□□ -1.82
LINC00534-203ENST00000523406 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
LINC00534-203ENST00000523406 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
LINC00534-203ENST00000523406 Q5VSD8 79 aa3.68□□□□□ -1.82
LINC00534-203ENST00000523406 TP53AIP1Q9HCN2 124 aa3.68□□□□□ -1.82
LINC00534-203ENST00000523406 APOBP04114 4563 aaKnown RBP3.67□□□□□ -1.82
LINC00534-203ENST00000523406 H0Y9P7 68 aa3.67□□□□□ -1.82
LINC00534-203ENST00000523406 LINC00313P59037 77 aa3.67□□□□□ -1.82
LINC00534-203ENST00000523406 MRPL34Q9BQ48 92 aaKnown RBP3.67□□□□□ -1.82
LINC00534-203ENST00000523406 CYSTM1Q9H1C7 97 aa3.67□□□□□ -1.82
LINC00534-203ENST00000523406 H3BPC8 53 aa3.66□□□□□ -1.82
LINC00534-203ENST00000523406 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
LINC00534-203ENST00000523406 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
LINC00534-203ENST00000523406 FAT1Q14517 4588 aa3.66□□□□□ -1.82
LINC00534-203ENST00000523406 FAM236DA0A1B0GTK5 79 aa3.65□□□□□ -1.83
LINC00534-203ENST00000523406 H7BZZ5 65 aa3.65□□□□□ -1.83
LINC00534-203ENST00000523406 FAM236CP0DP71 79 aa3.65□□□□□ -1.83
LINC00534-203ENST00000523406 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
LINC00534-203ENST00000523406 RYR1P21817 5038 aa3.64□□□□□ -1.83
LINC00534-203ENST00000523406 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
LINC00534-203ENST00000523406 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
LINC00534-203ENST00000523406 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
LINC00534-203ENST00000523406 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
LINC00534-203ENST00000523406 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
LINC00534-203ENST00000523406 V9GYY9 64 aa3.61□□□□□ -1.83
LINC00534-203ENST00000523406 A8MU10 97 aa3.59□□□□□ -1.83
LINC00534-203ENST00000523406 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms