RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TRBV7-4A0A0J9YYF1 115 aa4.45□□□□□ -1.7
CTNNA1-229ENST00000521683 FAM236DA0A1B0GTK5 79 aa4.45□□□□□ -1.7
CTNNA1-229ENST00000521683 FAM236CP0DP71 79 aa4.45□□□□□ -1.7
CTNNA1-229ENST00000521683 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
CTNNA1-229ENST00000521683 HRES1P13985 223 aa4.44□□□□□ -1.7
CTNNA1-229ENST00000521683 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
CTNNA1-229ENST00000521683 MT1FP04733 61 aa4.43□□□□□ -1.7
CTNNA1-229ENST00000521683 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CTNNA1-229ENST00000521683 C2orf91Q6ZV80 131 aa4.43□□□□□ -1.7
CTNNA1-229ENST00000521683 PRO1854Q9UHT4 67 aa4.43□□□□□ -1.7
CTNNA1-229ENST00000521683 H3BQ85 93 aa4.42□□□□□ -1.7
CTNNA1-229ENST00000521683 CEND1Q8N111 149 aa4.42□□□□□ -1.7
CTNNA1-229ENST00000521683 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-229ENST00000521683 TRIAP1O43715 76 aa4.41□□□□□ -1.7
CTNNA1-229ENST00000521683 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
CTNNA1-229ENST00000521683 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
CTNNA1-229ENST00000521683 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
CTNNA1-229ENST00000521683 DNAL4O96015 105 aa4.4□□□□□ -1.71
CTNNA1-229ENST00000521683 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
CTNNA1-229ENST00000521683 ORMDL1Q9P0S3 153 aa4.4□□□□□ -1.71
CTNNA1-229ENST00000521683 FXYD2P54710 66 aa4.39□□□□□ -1.71
CTNNA1-229ENST00000521683 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
CTNNA1-229ENST00000521683 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 A0A1B0GV90 55 aa4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 TRACP01848 142 aa4.38□□□□□ -1.71
CTNNA1-229ENST00000521683 CCKP06307 115 aa4.37□□□□□ -1.71
CTNNA1-229ENST00000521683 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
CTNNA1-229ENST00000521683 MTURNQ8N3F0 131 aa4.37□□□□□ -1.71
CTNNA1-229ENST00000521683 A0A1B0GV72 72 aa4.36□□□□□ -1.71
CTNNA1-229ENST00000521683 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
CTNNA1-229ENST00000521683 HSD52Q0P140 79 aa4.36□□□□□ -1.71
CTNNA1-229ENST00000521683 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
CTNNA1-229ENST00000521683 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
CTNNA1-229ENST00000521683 COX6CP09669 75 aa4.35□□□□□ -1.71
CTNNA1-229ENST00000521683 BATFQ16520 125 aa4.35□□□□□ -1.71
CTNNA1-229ENST00000521683 PSMB2P49721 201 aa4.34□□□□□ -1.71
CTNNA1-229ENST00000521683 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-229ENST00000521683 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
CTNNA1-229ENST00000521683 J3KT08 172 aa4.32□□□□□ -1.72
CTNNA1-229ENST00000521683 K7ERJ3 54 aa4.32□□□□□ -1.72
CTNNA1-229ENST00000521683 SPINK7P58062 85 aa4.32□□□□□ -1.72
CTNNA1-229ENST00000521683 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
CTNNA1-229ENST00000521683 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-229ENST00000521683 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
CTNNA1-229ENST00000521683 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
CTNNA1-229ENST00000521683 VPS25Q9BRG1 176 aa4.31□□□□□ -1.72
CTNNA1-229ENST00000521683 A8MWP4 228 aa4.3□□□□□ -1.72
CTNNA1-229ENST00000521683 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
CTNNA1-229ENST00000521683 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-229ENST00000521683 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
CTNNA1-229ENST00000521683 NDUFB1O75438 58 aa4.28□□□□□ -1.72
CTNNA1-229ENST00000521683 Q6ZQT0 140 aa4.28□□□□□ -1.72
CTNNA1-229ENST00000521683 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
CTNNA1-229ENST00000521683 C9JAW5 83 aa4.27□□□□□ -1.73
CTNNA1-229ENST00000521683 LYRM7Q5U5X0 104 aa4.27□□□□□ -1.73
CTNNA1-229ENST00000521683 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
CTNNA1-229ENST00000521683 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
CTNNA1-229ENST00000521683 A0A1B0GW54 56 aa4.25□□□□□ -1.73
CTNNA1-229ENST00000521683 A0A1W2PPM0 123 aa4.25□□□□□ -1.73
CTNNA1-229ENST00000521683 SCGB1C2P0DMR2 95 aa4.25□□□□□ -1.73
CTNNA1-229ENST00000521683 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
CTNNA1-229ENST00000521683 K7EP34 96 aa4.24□□□□□ -1.73
CTNNA1-229ENST00000521683 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
CTNNA1-229ENST00000521683 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 F8W1H4 67 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 JMJD7-PLA2G4BH0Y9G9 81 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 K7ERU9 68 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 Q6ZVQ6 151 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 SPCS1Q9Y6A9 102 aa4.22□□□□□ -1.73
CTNNA1-229ENST00000521683 PDE6GP18545 87 aa4.21□□□□□ -1.74
CTNNA1-229ENST00000521683 J3QR89 54 aa4.2□□□□□ -1.74
CTNNA1-229ENST00000521683 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
CTNNA1-229ENST00000521683 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
CTNNA1-229ENST00000521683 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
CTNNA1-229ENST00000521683 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
CTNNA1-229ENST00000521683 TMEM254Q8TBM7 123 aa4.19□□□□□ -1.74
CTNNA1-229ENST00000521683 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
CTNNA1-229ENST00000521683 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
CTNNA1-229ENST00000521683 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
CTNNA1-229ENST00000521683 NEBP20929 6669 aa4.17□□□□□ -1.74
CTNNA1-229ENST00000521683 NREPQ16612 68 aa4.16□□□□□ -1.74
CTNNA1-229ENST00000521683 C14orf132Q9NPU4 83 aa4.15□□□□□ -1.75
CTNNA1-229ENST00000521683 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
CTNNA1-229ENST00000521683 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
CTNNA1-229ENST00000521683 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
CTNNA1-229ENST00000521683 K7EQZ3 153 aa4.12□□□□□ -1.75
CTNNA1-229ENST00000521683 NDUFS5O43920 106 aa4.12□□□□□ -1.75
CTNNA1-229ENST00000521683 NAA38Q9BRA0 125 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-229ENST00000521683 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
CTNNA1-229ENST00000521683 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
CTNNA1-229ENST00000521683 PRO0461Q9UI25 63 aa4.11□□□□□ -1.75
CTNNA1-229ENST00000521683 H3BT86 120 aa4.09□□□□□ -1.75
CTNNA1-229ENST00000521683 SCGB1A1P11684 91 aa4.08□□□□□ -1.76
CTNNA1-229ENST00000521683 ETDBQ3ZM63 59 aa4.08□□□□□ -1.76
CTNNA1-229ENST00000521683 Q5W150 140 aa4.08□□□□□ -1.76
CTNNA1-229ENST00000521683 BPY2O14599 106 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms