RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 K7ERJ3 54 aa4.31□□□□□ -1.72
PABPC1-213ENST00000519848 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
PABPC1-213ENST00000519848 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
PABPC1-213ENST00000519848 SPATA45Q537H7 98 aa4.3□□□□□ -1.72
PABPC1-213ENST00000519848 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
PABPC1-213ENST00000519848 TEN1Q86WV5 123 aa4.29□□□□□ -1.72
PABPC1-213ENST00000519848 HIGD1BQ9P298 99 aa4.29□□□□□ -1.72
PABPC1-213ENST00000519848 H3BMG7 143 aa4.28□□□□□ -1.72
PABPC1-213ENST00000519848 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
PABPC1-213ENST00000519848 CEND1Q8N111 149 aa4.27□□□□□ -1.73
PABPC1-213ENST00000519848 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
PABPC1-213ENST00000519848 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
PABPC1-213ENST00000519848 S100A6P06703 90 aa4.26□□□□□ -1.73
PABPC1-213ENST00000519848 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
PABPC1-213ENST00000519848 FABP2P12104 132 aa4.25□□□□□ -1.73
PABPC1-213ENST00000519848 SS18L2Q9UHA2 77 aa4.25□□□□□ -1.73
PABPC1-213ENST00000519848 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
PABPC1-213ENST00000519848 H0YGX0 51 aa4.24□□□□□ -1.73
PABPC1-213ENST00000519848 IGKV4-1P06312 121 aa4.24□□□□□ -1.73
PABPC1-213ENST00000519848 PYY3Q5JQD4 70 aa4.24□□□□□ -1.73
PABPC1-213ENST00000519848 VAMP8Q9BV40 100 aa4.24□□□□□ -1.73
PABPC1-213ENST00000519848 S100A1P23297 94 aa4.22□□□□□ -1.73
PABPC1-213ENST00000519848 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
PABPC1-213ENST00000519848 A0A1B0GX51 115 aa4.21□□□□□ -1.74
PABPC1-213ENST00000519848 LINC00313P59037 77 aa4.21□□□□□ -1.74
PABPC1-213ENST00000519848 IGHV6-1A0A0B4J1U7 121 aa4.2□□□□□ -1.74
PABPC1-213ENST00000519848 CCKP06307 115 aa4.19□□□□□ -1.74
PABPC1-213ENST00000519848 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
PABPC1-213ENST00000519848 HSD52Q0P140 79 aa4.18□□□□□ -1.74
PABPC1-213ENST00000519848 ANKRD29Q8N6D5 301 aa4.18□□□□□ -1.74
PABPC1-213ENST00000519848 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
PABPC1-213ENST00000519848 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
PABPC1-213ENST00000519848 TRBV20-1A0A075B6N2 111 aa4.17□□□□□ -1.74
PABPC1-213ENST00000519848 FAM236DA0A1B0GTK5 79 aa4.16□□□□□ -1.74
PABPC1-213ENST00000519848 A0A1B0GVX0 72 aa4.16□□□□□ -1.74
PABPC1-213ENST00000519848 FAM236CP0DP71 79 aa4.16□□□□□ -1.74
PABPC1-213ENST00000519848 TRACP01848 142 aa4.15□□□□□ -1.75
PABPC1-213ENST00000519848 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
PABPC1-213ENST00000519848 NAA38Q9BRA0 125 aaKnown RBP4.15□□□□□ -1.75
PABPC1-213ENST00000519848 PSMB2P49721 201 aa4.14□□□□□ -1.75
PABPC1-213ENST00000519848 ZCCHC13Q8WW36 166 aaKnown RBP4.14□□□□□ -1.75
PABPC1-213ENST00000519848 SPINK7P58062 85 aa4.13□□□□□ -1.75
PABPC1-213ENST00000519848 UBE2V1Q13404 147 aa4.13□□□□□ -1.75
PABPC1-213ENST00000519848 VPS25Q9BRG1 176 aa4.13□□□□□ -1.75
PABPC1-213ENST00000519848 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
PABPC1-213ENST00000519848 DNAL4O96015 105 aa4.12□□□□□ -1.75
PABPC1-213ENST00000519848 IGKV3D-7A0A0C4DH55 119 aa4.11□□□□□ -1.75
PABPC1-213ENST00000519848 TMEM256-PLSCR3K7ERE1 68 aa4.11□□□□□ -1.75
PABPC1-213ENST00000519848 PCP4P48539 62 aa4.11□□□□□ -1.75
PABPC1-213ENST00000519848 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
PABPC1-213ENST00000519848 C8orf87E5RJ46 101 aa4.1□□□□□ -1.75
PABPC1-213ENST00000519848 Q6ZQT0 140 aa4.1□□□□□ -1.75
PABPC1-213ENST00000519848 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
PABPC1-213ENST00000519848 SNCGO76070 127 aa4.09□□□□□ -1.75
PABPC1-213ENST00000519848 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
PABPC1-213ENST00000519848 UQCR10Q9UDW1 63 aa4.08□□□□□ -1.76
PABPC1-213ENST00000519848 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
PABPC1-213ENST00000519848 BAALC-AS2P0C853 105 aa4.07□□□□□ -1.76
PABPC1-213ENST00000519848 RBM3P98179 157 aaKnown RBP4.07□□□□□ -1.76
PABPC1-213ENST00000519848 A8MWP4 228 aa4.05□□□□□ -1.76
PABPC1-213ENST00000519848 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
PABPC1-213ENST00000519848 LOC110117498A0A087WWA1 95 aa4.04□□□□□ -1.76
PABPC1-213ENST00000519848 COX6CP09669 75 aa4.04□□□□□ -1.76
PABPC1-213ENST00000519848 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
PABPC1-213ENST00000519848 C9JAW5 83 aa4.03□□□□□ -1.76
PABPC1-213ENST00000519848 H3BQ85 93 aa4.03□□□□□ -1.76
PABPC1-213ENST00000519848 Q5W150 140 aa4.03□□□□□ -1.76
PABPC1-213ENST00000519848 K7EQZ3 153 aa4.02□□□□□ -1.77
PABPC1-213ENST00000519848 SCGB1C2P0DMR2 95 aa4.02□□□□□ -1.77
PABPC1-213ENST00000519848 Q6ZVQ6 151 aa4.02□□□□□ -1.77
PABPC1-213ENST00000519848 MTURNQ8N3F0 131 aa4.02□□□□□ -1.77
PABPC1-213ENST00000519848 J3KT08 172 aa4.01□□□□□ -1.77
PABPC1-213ENST00000519848 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
PABPC1-213ENST00000519848 MT1BP07438 61 aa4□□□□□ -1.77
PABPC1-213ENST00000519848 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
PABPC1-213ENST00000519848 Q8N9L7 120 aa3.98□□□□□ -1.77
PABPC1-213ENST00000519848 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
PABPC1-213ENST00000519848 ATXN8Q156A1 80 aa3.97□□□□□ -1.77
PABPC1-213ENST00000519848 TMEM254Q8TBM7 123 aa3.97□□□□□ -1.77
PABPC1-213ENST00000519848 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
PABPC1-213ENST00000519848 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
PABPC1-213ENST00000519848 NDUFB1O75438 58 aa3.95□□□□□ -1.78
PABPC1-213ENST00000519848 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
PABPC1-213ENST00000519848 BPY2O14599 106 aa3.94□□□□□ -1.78
PABPC1-213ENST00000519848 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
PABPC1-213ENST00000519848 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
PABPC1-213ENST00000519848 hDV103S1A0JD37 113 aa3.93□□□□□ -1.78
PABPC1-213ENST00000519848 C4orf26Q17RF5 130 aa3.92□□□□□ -1.78
PABPC1-213ENST00000519848 NEBP20929 6669 aa3.92□□□□□ -1.78
PABPC1-213ENST00000519848 M0R143 59 aa3.91□□□□□ -1.78
PABPC1-213ENST00000519848 TAX1BP3O14907 124 aa3.91□□□□□ -1.78
PABPC1-213ENST00000519848 NREPQ16612 68 aa3.91□□□□□ -1.78
PABPC1-213ENST00000519848 A0A1B0GW54 56 aa3.9□□□□□ -1.79
PABPC1-213ENST00000519848 NDUFS5O43920 106 aa3.9□□□□□ -1.79
PABPC1-213ENST00000519848 BATFQ16520 125 aa3.9□□□□□ -1.79
PABPC1-213ENST00000519848 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
PABPC1-213ENST00000519848 C5orf47Q569G3 176 aa3.89□□□□□ -1.79
PABPC1-213ENST00000519848 C7orf65Q6ZTY9 151 aa3.89□□□□□ -1.79
PABPC1-213ENST00000519848 HCG22E2RYF7 251 aa3.88□□□□□ -1.79
PABPC1-213ENST00000519848 SMIM6P0DI80 62 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms