RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
CLK4-203ENST00000519583 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.67
CLK4-203ENST00000519583 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.67
CLK4-203ENST00000519583 SSBP3-AS1Q7Z2R9 100 aa4.65□□□□□ -1.67
CLK4-203ENST00000519583 PRR26Q8N8Z3 221 aa4.65□□□□□ -1.67
CLK4-203ENST00000519583 J3KT08 172 aa4.64□□□□□ -1.67
CLK4-203ENST00000519583 FAM229BQ4G0N7 80 aa4.63□□□□□ -1.67
CLK4-203ENST00000519583 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
CLK4-203ENST00000519583 HERC1Q15751 4861 aa4.63□□□□□ -1.67
CLK4-203ENST00000519583 CD164Q04900 197 aa4.62□□□□□ -1.67
CLK4-203ENST00000519583 SNURFQ9Y675 71 aa4.62□□□□□ -1.67
CLK4-203ENST00000519583 NDUFB1O75438 58 aa4.62□□□□□ -1.67
CLK4-203ENST00000519583 TNXBP22105 4242 aa4.61□□□□□ -1.67
CLK4-203ENST00000519583 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
CLK4-203ENST00000519583 MMP24-AS1A0A0U1RRL7 71 aa4.6□□□□□ -1.67
CLK4-203ENST00000519583 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
CLK4-203ENST00000519583 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
CLK4-203ENST00000519583 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.68
CLK4-203ENST00000519583 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
CLK4-203ENST00000519583 TYMSOSQ8TAI1 123 aa4.58□□□□□ -1.68
CLK4-203ENST00000519583 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
CLK4-203ENST00000519583 hDV103S1A0JD37 113 aa4.57□□□□□ -1.68
CLK4-203ENST00000519583 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
CLK4-203ENST00000519583 H7BZZ5 65 aa4.57□□□□□ -1.68
CLK4-203ENST00000519583 TMEM258P61165 79 aa4.57□□□□□ -1.68
CLK4-203ENST00000519583 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
CLK4-203ENST00000519583 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
CLK4-203ENST00000519583 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
CLK4-203ENST00000519583 C4orf48Q5BLP8 95 aa4.54□□□□□ -1.68
CLK4-203ENST00000519583 C1orf195Q5TG92 126 aa4.54□□□□□ -1.68
CLK4-203ENST00000519583 Q5XG85 94 aa4.54□□□□□ -1.68
CLK4-203ENST00000519583 LIMD2Q9BT23 127 aa4.53□□□□□ -1.68
CLK4-203ENST00000519583 NDUFC1O43677 76 aa4.53□□□□□ -1.68
CLK4-203ENST00000519583 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
CLK4-203ENST00000519583 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
CLK4-203ENST00000519583 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
CLK4-203ENST00000519583 MP68P56378 58 aa4.52□□□□□ -1.69
CLK4-203ENST00000519583 MRPL34Q9BQ48 92 aaKnown RBP4.52□□□□□ -1.69
CLK4-203ENST00000519583 H0Y9P7 68 aa4.51□□□□□ -1.69
CLK4-203ENST00000519583 NDUFS5O43920 106 aa4.51□□□□□ -1.69
CLK4-203ENST00000519583 SPINK1P00995 79 aa4.51□□□□□ -1.69
CLK4-203ENST00000519583 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
CLK4-203ENST00000519583 LINC00208Q96KT6 92 aa4.5□□□□□ -1.69
CLK4-203ENST00000519583 C8orf87E5RJ46 101 aa4.49□□□□□ -1.69
CLK4-203ENST00000519583 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
CLK4-203ENST00000519583 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
CLK4-203ENST00000519583 TP53AIP1Q9HCN2 124 aa4.49□□□□□ -1.69
CLK4-203ENST00000519583 LINC00313P59037 77 aa4.48□□□□□ -1.69
CLK4-203ENST00000519583 SPAG11AQ6PDA7 123 aa4.48□□□□□ -1.69
CLK4-203ENST00000519583 PRR4Q16378 134 aa4.47□□□□□ -1.69
CLK4-203ENST00000519583 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
CLK4-203ENST00000519583 H3BPC8 53 aa4.47□□□□□ -1.69
CLK4-203ENST00000519583 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
CLK4-203ENST00000519583 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
CLK4-203ENST00000519583 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
CLK4-203ENST00000519583 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
CLK4-203ENST00000519583 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
CLK4-203ENST00000519583 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
CLK4-203ENST00000519583 Q5W150 140 aa4.44□□□□□ -1.7
CLK4-203ENST00000519583 SERP1Q9Y6X1 66 aa4.43□□□□□ -1.7
CLK4-203ENST00000519583 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
CLK4-203ENST00000519583 LRP2P98164 4655 aa4.41□□□□□ -1.7
CLK4-203ENST00000519583 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CLK4-203ENST00000519583 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
CLK4-203ENST00000519583 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
CLK4-203ENST00000519583 LPAP08519 4548 aa4.39□□□□□ -1.71
CLK4-203ENST00000519583 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
CLK4-203ENST00000519583 LOC101927531A0A1B0GV80 90 aa4.37□□□□□ -1.71
CLK4-203ENST00000519583 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
CLK4-203ENST00000519583 SPANXA2-OT1Q8N9U9 137 aa4.37□□□□□ -1.71
CLK4-203ENST00000519583 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
CLK4-203ENST00000519583 UBR4Q5T4S7 5183 aa4.35□□□□□ -1.71
CLK4-203ENST00000519583 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
CLK4-203ENST00000519583 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
CLK4-203ENST00000519583 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
CLK4-203ENST00000519583 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
CLK4-203ENST00000519583 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
CLK4-203ENST00000519583 A8MUU9 505 aa4.3□□□□□ -1.72
CLK4-203ENST00000519583 HRES1P13985 223 aa4.3□□□□□ -1.72
CLK4-203ENST00000519583 COA5Q86WW8 74 aa4.29□□□□□ -1.72
CLK4-203ENST00000519583 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
CLK4-203ENST00000519583 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
CLK4-203ENST00000519583 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
CLK4-203ENST00000519583 XP32Q5T750 250 aa4.25□□□□□ -1.73
CLK4-203ENST00000519583 Q75L30 129 aa4.25□□□□□ -1.73
CLK4-203ENST00000519583 DMAC1Q96GE9 116 aa4.24□□□□□ -1.73
CLK4-203ENST00000519583 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
CLK4-203ENST00000519583 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
CLK4-203ENST00000519583 ACYP2P14621 99 aa4.22□□□□□ -1.73
CLK4-203ENST00000519583 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
CLK4-203ENST00000519583 Q1T7F1 81 aa4.21□□□□□ -1.74
CLK4-203ENST00000519583 SPINK7P58062 85 aa4.2□□□□□ -1.74
CLK4-203ENST00000519583 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
CLK4-203ENST00000519583 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
CLK4-203ENST00000519583 CHKB-CPT1BH3BT56 60 aa4.18□□□□□ -1.74
CLK4-203ENST00000519583 PSPHP1O15172 72 aa4.18□□□□□ -1.74
CLK4-203ENST00000519583 MUC2Q02817 5179 aa4.17□□□□□ -1.74
CLK4-203ENST00000519583 V9GYY9 64 aa4.17□□□□□ -1.74
CLK4-203ENST00000519583 A8MUN3 132 aa4.16□□□□□ -1.74
CLK4-203ENST00000519583 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms