RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 MT1AP04731 61 aa-0.67□□□□□ -2.52
SKP1-203ENST00000517625 GNG4P50150 75 aa-0.67□□□□□ -2.52
SKP1-203ENST00000517625 SVBPQ8N300 66 aa-0.67□□□□□ -2.52
SKP1-203ENST00000517625 DLEU1O43261 78 aa-0.68□□□□□ -2.52
SKP1-203ENST00000517625 SAA2P0DJI9 122 aaPredicted RBP-0.68□□□□□ -2.52
SKP1-203ENST00000517625 C12orf57Q99622 126 aa-0.68□□□□□ -2.52
SKP1-203ENST00000517625 MYH7P12883 1935 aa-0.68□□□□□ -2.52
SKP1-203ENST00000517625 CORTO00230 105 aa-0.69□□□□□ -2.52
SKP1-203ENST00000517625 TOP2AP11388 1531 aaKnown RBP-0.69□□□□□ -2.52
SKP1-203ENST00000517625 FAM223BA6NKX1 122 aa-0.7□□□□□ -2.52
SKP1-203ENST00000517625 KRTDAPP60985 99 aa-0.7□□□□□ -2.52
SKP1-203ENST00000517625 PPP3R1P63098 170 aa-0.7□□□□□ -2.52
SKP1-203ENST00000517625 CCDC141Q6ZP82 1450 aa-0.7□□□□□ -2.52
SKP1-203ENST00000517625 SEC11AP67812 179 aa-0.72□□□□□ -2.52
SKP1-203ENST00000517625 KLK9Q2XQG4 91 aa-0.72□□□□□ -2.52
SKP1-203ENST00000517625 PRXQ9BXM0 1461 aa-0.73□□□□□ -2.53
SKP1-203ENST00000517625 MRPS10P82664 201 aaKnown RBP-0.73□□□□□ -2.53
SKP1-203ENST00000517625 TMEM203Q969S6 136 aa-0.73□□□□□ -2.53
SKP1-203ENST00000517625 CGREF1Q99674 301 aa-0.73□□□□□ -2.53
SKP1-203ENST00000517625 IQGAP3Q86VI3 1631 aa-0.74□□□□□ -2.53
SKP1-203ENST00000517625 A0A1B0GV90 55 aa-0.74□□□□□ -2.53
SKP1-203ENST00000517625 CPSF4LA6NMK7 179 aaKnown RBP-0.74□□□□□ -2.53
SKP1-203ENST00000517625 LCN9Q8WX39 176 aa-0.74□□□□□ -2.53
SKP1-203ENST00000517625 KIF20BQ96Q89 1820 aa-0.75□□□□□ -2.53
SKP1-203ENST00000517625 CRYM-AS1A6NIL9 109 aa-0.75□□□□□ -2.53
SKP1-203ENST00000517625 SFTA2Q6UW10 78 aa-0.75□□□□□ -2.53
SKP1-203ENST00000517625 CD163L1Q9NR16 1453 aa-0.75□□□□□ -2.53
SKP1-203ENST00000517625 C2orf88Q9BSF0 95 aa-0.76□□□□□ -2.53
SKP1-203ENST00000517625 VAMP8Q9BV40 100 aa-0.76□□□□□ -2.53
SKP1-203ENST00000517625 CRIPTQ9P021 101 aa-0.76□□□□□ -2.53
SKP1-203ENST00000517625 APLNQ9ULZ1 77 aa-0.76□□□□□ -2.53
SKP1-203ENST00000517625 PDCD11Q14690 1871 aaKnown RBP-0.76□□□□□ -2.53
SKP1-203ENST00000517625 PLIN4Q96Q06 1357 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 A0A1B0GU69 56 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 S100A1P23297 94 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 MT1XP80297 61 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 MT1LQ93083 61 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 GNG8Q9UK08 70 aa-0.77□□□□□ -2.53
SKP1-203ENST00000517625 TMEM262E9PQX1 116 aa-0.78□□□□□ -2.53
SKP1-203ENST00000517625 H3BQF6 201 aa-0.78□□□□□ -2.53
SKP1-203ENST00000517625 TCHHQ07283 1943 aa-0.78□□□□□ -2.53
SKP1-203ENST00000517625 EDC4Q6P2E9 1401 aaKnown RBP-0.79□□□□□ -2.54
SKP1-203ENST00000517625 I3L3M4 83 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 NDUFC1O43677 76 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 SNCAP37840 140 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 DEFA5Q01523 94 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 DEFB135Q30KP9 77 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 GTF2H5Q6ZYL4 71 aa-0.79□□□□□ -2.54
SKP1-203ENST00000517625 C7orf77A4D0Y5 90 aa-0.8□□□□□ -2.54
SKP1-203ENST00000517625 SARNPP82979 210 aaKnown RBP-0.8□□□□□ -2.54
SKP1-203ENST00000517625 C6orf201Q7Z4U5 140 aa-0.8□□□□□ -2.54
SKP1-203ENST00000517625 A0A087WVE0 104 aa-0.81□□□□□ -2.54
SKP1-203ENST00000517625 A0A0G2JND7 137 aa-0.81□□□□□ -2.54
SKP1-203ENST00000517625 RPS29P62273 56 aaKnown RBP-0.81□□□□□ -2.54
SKP1-203ENST00000517625 hADV29S1A0JD25 119 aa-0.82□□□□□ -2.54
SKP1-203ENST00000517625 HSD52Q0P140 79 aa-0.82□□□□□ -2.54
SKP1-203ENST00000517625 TRBV25-1A0A075B6N4 114 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 H0Y9P7 68 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 STATHP02808 62 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 H1FX-AS1Q4G0G2 97 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 C9orf62Q8N4C0 152 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 CACFD1Q9UGQ2 172 aa-0.83□□□□□ -2.54
SKP1-203ENST00000517625 CCL22O00626 93 aa-0.84□□□□□ -2.54
SKP1-203ENST00000517625 MPC2O95563 127 aa-0.84□□□□□ -2.54
SKP1-203ENST00000517625 TFF3Q07654 80 aa-0.84□□□□□ -2.54
SKP1-203ENST00000517625 PMCHL1Q16048 86 aa-0.84□□□□□ -2.54
SKP1-203ENST00000517625 WFDC9Q8NEX5 89 aa-0.84□□□□□ -2.54
SKP1-203ENST00000517625 ARMS2P0C7Q2 107 aa-0.85□□□□□ -2.55
SKP1-203ENST00000517625 PSMG4Q5JS54 123 aa-0.85□□□□□ -2.55
SKP1-203ENST00000517625 LINC00587B1AMM8 73 aa-0.86□□□□□ -2.55
SKP1-203ENST00000517625 GNGT1P63211 74 aa-0.86□□□□□ -2.55
SKP1-203ENST00000517625 C20orf202A1L168 122 aa-0.87□□□□□ -2.55
SKP1-203ENST00000517625 MRPL34Q9BQ48 92 aaKnown RBP-0.87□□□□□ -2.55
SKP1-203ENST00000517625 DEFB107AQ8IZN7 70 aa-0.88□□□□□ -2.55
SKP1-203ENST00000517625 TRGV9Q99603 122 aa-0.88□□□□□ -2.55
SKP1-203ENST00000517625 TRAV30A0A087WSZ9 112 aa-0.89□□□□□ -2.55
SKP1-203ENST00000517625 H7BZZ5 65 aa-0.89□□□□□ -2.55
SKP1-203ENST00000517625 CCNB3Q8WWL7 1395 aa-0.89□□□□□ -2.55
SKP1-203ENST00000517625 GNGT2O14610 69 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 UQCRHP07919 91 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 HMGN3Q15651 99 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 ALKAL2Q6UX46 152 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 CDKN2A-AS1Q9UH64 79 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 VPS8Q8N3P4 1428 aa-0.9□□□□□ -2.55
SKP1-203ENST00000517625 MYH4Q9Y623 1939 aa-0.91□□□□□ -2.56
SKP1-203ENST00000517625 SPTY2D1-AS1A0A0U1RR47 76 aa-0.92□□□□□ -2.56
SKP1-203ENST00000517625 DEFB112Q30KQ8 113 aa-0.92□□□□□ -2.56
SKP1-203ENST00000517625 KRTAP19-5Q3LI72 72 aa-0.92□□□□□ -2.56
SKP1-203ENST00000517625 TRBV7-7A0A0K0K1E9 115 aa-0.93□□□□□ -2.56
SKP1-203ENST00000517625 ATOX1O00244 68 aa-0.93□□□□□ -2.56
SKP1-203ENST00000517625 SERP2Q8N6R1 65 aa-0.93□□□□□ -2.56
SKP1-203ENST00000517625 HIGD1BQ9P298 99 aa-0.93□□□□□ -2.56
SKP1-203ENST00000517625 CEP162Q5TB80 1403 aa-0.94□□□□□ -2.56
SKP1-203ENST00000517625 HEPN1Q6WQI6 88 aa-0.94□□□□□ -2.56
SKP1-203ENST00000517625 TTTY10Q9BZA0 68 aa-0.94□□□□□ -2.56
SKP1-203ENST00000517625 TMEM218A2RU14 115 aa-0.95□□□□□ -2.56
SKP1-203ENST00000517625 PSENENQ9NZ42 101 aa-0.95□□□□□ -2.56
SKP1-203ENST00000517625 AP4S1Q9Y587 144 aa-0.95□□□□□ -2.56
SKP1-203ENST00000517625 S100PP25815 95 aa-0.96□□□□□ -2.56
SKP1-203ENST00000517625 PMCHL2Q9BQD1 86 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms