RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 UBE2D4Q9Y2X8 147 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 SPCS1Q9Y6A9 102 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 ANK2Q01484 3957 aa1.23□□□□□ -2.21
HMGB1P47-201ENST00000511281 MGAM2Q2M2H8 2515 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 NDUFA1O15239 70 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 SPINK8P0C7L1 97 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 DEFB130BP0DP73 79 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 DEFB130AP0DP74 79 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 WFDC9Q8NEX5 89 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 TRRAPQ9Y4A5 3859 aa1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 NSD1Q96L73 2696 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P47-201ENST00000511281 NIPBLQ6KC79 2804 aaeCLIP1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 MXRA5Q9NR99 2828 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 DEFB4AO15263 64 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 IFITM1P13164 125 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 COX6A2Q02221 97 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 WFDC2Q14508 124 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 DEFB135Q30KP9 77 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 SPANXDQ9BXN6 97 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 CDC42SE2Q9NRR3 84 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 CDKN2A-AS1Q9UH64 79 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 PRO1854Q9UHT4 67 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 PRO0255Q9UI72 69 aa1.21□□□□□ -2.22
HMGB1P47-201ENST00000511281 A0A096LPF7 62 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 LINC00959A0A1B0GUT2 108 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 TMEM262E9PQX1 116 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 SPART-AS1P0CW21 52 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 SFTA2Q6UW10 78 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 COX7B2Q8TF08 81 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 COPS9Q8WXC6 57 aa1.2□□□□□ -2.22
HMGB1P47-201ENST00000511281 H3BNG1 76 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 COX6CP09669 75 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 HTN3P15516 51 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 RPL37P61927 97 aaKnown RBP1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 ATXN8Q156A1 80 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 ETDBQ3ZM63 59 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 DEFB121Q5J5C9 76 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 MEIG1Q5JSS6 88 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 LELP1Q5T871 98 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 CLPSL2Q6UWE3 100 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 C5orf38Q86SI9 138 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 LINC00308Q8TCZ7 52 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 DPH3Q96FX2 82 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 LINC01600Q96MT4 127 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 TOMM7Q9P0U1 55 aa1.19□□□□□ -2.22
HMGB1P47-201ENST00000511281 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 COL6A5A8TX70 2615 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 TRAV13-2A0A0B4J235 113 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 A0A0D9SG42 100 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 LINC00158P58513 81 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 NPC2P61916 151 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 SPAG11BQ08648 103 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 Q8IZM0 81 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 NOTCH1P46531 2555 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 CMYA5Q8N3K9 4069 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 NBEAL2Q6ZNJ1 2754 aa1.18□□□□□ -2.22
HMGB1P47-201ENST00000511281 VWFP04275 2813 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 DEFB131BA0A096LNP1 70 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 GVQW2A0A096LPI5 108 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 CCL18P55774 89 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 COX17Q14061 63 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 LINC01556Q5JQF7 62 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 WFDC10BQ8IUB3 73 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 SMIM11BQ8TCY0 68 aa1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 PRKDCP78527 4128 aaKnown RBP1.17□□□□□ -2.22
HMGB1P47-201ENST00000511281 STAB2Q8WWQ8 2551 aa1.16□□□□□ -2.22
HMGB1P47-201ENST00000511281 LCE6AA0A183 80 aa1.16□□□□□ -2.22
HMGB1P47-201ENST00000511281 H0YGX0 51 aa1.16□□□□□ -2.22
HMGB1P47-201ENST00000511281 C6orf48Q9UBA6 75 aa1.16□□□□□ -2.22
HMGB1P47-201ENST00000511281 LY6G6CO95867 125 aa1.15□□□□□ -2.23
HMGB1P47-201ENST00000511281 MT-ATP8P03928 68 aa1.15□□□□□ -2.23
HMGB1P47-201ENST00000511281 C9orf116Q5BN46 136 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P47-201ENST00000511281 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
HMGB1P47-201ENST00000511281 HUWE1Q7Z6Z7 4374 aaKnown RBP1.15□□□□□ -2.23
HMGB1P47-201ENST00000511281 NBEAL1Q6ZS30 2694 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 DNAH3Q8TD57 4116 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 TRBV10-3A0A0K0K1G6 114 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 hADV29S1A0JD25 119 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 SNCGO76070 127 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 ACYP1P07311 99 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 ELOF1P60002 83 aaKnown RBP1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 S100A7L2Q5SY68 101 aa1.14□□□□□ -2.23
HMGB1P47-201ENST00000511281 KMT2CQ8NEZ4 4911 aaKnown RBP1.13□□□□□ -2.23
HMGB1P47-201ENST00000511281 TRBV7-7A0A0K0K1E9 115 aa1.13□□□□□ -2.23
HMGB1P47-201ENST00000511281 COX7BP24311 80 aa1.13□□□□□ -2.23
HMGB1P47-201ENST00000511281 LINC00643Q86TS7 51 aa1.13□□□□□ -2.23
HMGB1P47-201ENST00000511281 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
HMGB1P47-201ENST00000511281 RYR3Q15413 4870 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 ATP5EP2Q5VTU8 51 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 Q6JHZ5 121 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 UBE2DNLQ8IWF7 75 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 LYSTQ99698 3801 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 KCNQ1DNQ9H478 68 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
HMGB1P47-201ENST00000511281 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
HMGB1P47-201ENST00000511281 IGLV5-48A0A075B6I7 105 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms