RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 SDK1Q7Z5N4 2213 aa2.91□□□□□ -1.94
NUP54-210ENST00000510884 RTTNQ86VV8 2226 aa2.91□□□□□ -1.94
NUP54-210ENST00000510884 ASCC3Q8N3C0 2202 aaKnown RBP2.91□□□□□ -1.94
NUP54-210ENST00000510884 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
NUP54-210ENST00000510884 ANGP03950 147 aaKnown RBP2.91□□□□□ -1.94
NUP54-210ENST00000510884 CCL26Q9Y258 94 aa2.91□□□□□ -1.94
NUP54-210ENST00000510884 NBDYA0A0U1RRE5 68 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 M0QY20 66 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 ACYP2P14621 99 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 WT1-ASQ06250 92 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 DEFB134Q4QY38 66 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 DIDO1Q9BTC0 2240 aaKnown RBP2.9□□□□□ -1.95
NUP54-210ENST00000510884 HERC2O95714 4834 aa2.9□□□□□ -1.95
NUP54-210ENST00000510884 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.9□□□□□ -1.954e-8■■■■■ 30.4
NUP54-210ENST00000510884 SPAG17Q6Q759 2223 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 SPTY2D1-AS1A0A0U1RR47 76 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 M0R2N4 97 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 HRES1P13985 223 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 CCL19Q99731 98 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 HIVEP2P31629 2446 aa2.89□□□□□ -1.95
NUP54-210ENST00000510884 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 LY6G6CO95867 125 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 RPL39P5Q59GN2 51 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 C5orf56Q8N8D9 126 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 Q96NJ1 140 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 RYR2Q92736 4967 aa2.88□□□□□ -1.95
NUP54-210ENST00000510884 PRKDCP78527 4128 aaKnown RBP2.88□□□□□ -1.95
NUP54-210ENST00000510884 A0A096LNT2 108 aa2.87□□□□□ -1.95
NUP54-210ENST00000510884 LYNX1G3V0Z9 82 aa2.87□□□□□ -1.95
NUP54-210ENST00000510884 I3L2K1 104 aa2.87□□□□□ -1.95
NUP54-210ENST00000510884 PRB3Q04118 309 aaPredicted RBP2.87□□□□□ -1.95
NUP54-210ENST00000510884 LEAP2Q969E1 77 aa2.87□□□□□ -1.95
NUP54-210ENST00000510884 IGLV5-48A0A075B6I7 105 aa2.86□□□□□ -1.95
NUP54-210ENST00000510884 DEFB119Q8N690 84 aa2.86□□□□□ -1.95
NUP54-210ENST00000510884 PRR14LQ5THK1 2151 aa2.85□□□□□ -1.95
NUP54-210ENST00000510884 K7EIM0 57 aa2.85□□□□□ -1.95
NUP54-210ENST00000510884 LY6EQ16553 131 aa2.85□□□□□ -1.95
NUP54-210ENST00000510884 SMR3AQ99954 134 aa2.85□□□□□ -1.95
NUP54-210ENST00000510884 F5P12259 2224 aa2.85□□□□□ -1.95
NUP54-210ENST00000510884 COL27A1Q8IZC6 1860 aaPredicted RBP2.84□□□□□ -1.95
NUP54-210ENST00000510884 KNTC1P50748 2209 aa2.84□□□□□ -1.95
NUP54-210ENST00000510884 K7EQZ3 153 aa2.84□□□□□ -1.95
NUP54-210ENST00000510884 ALPK2Q86TB3 2170 aa2.83□□□□□ -1.96
NUP54-210ENST00000510884 DEFB108AA8MXU0 73 aa2.83□□□□□ -1.96
NUP54-210ENST00000510884 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
NUP54-210ENST00000510884 COX14Q96I36 57 aa2.83□□□□□ -1.96
NUP54-210ENST00000510884 IGLV6-57P01721 117 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 C10orf55Q5SWW7 151 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 MINOS1Q5TGZ0 78 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 SEC16AO15027 2179 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 USF3Q68DE3 2245 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 UNC13CQ8NB66 2214 aa2.82□□□□□ -1.96
NUP54-210ENST00000510884 SONP18583 2426 aaKnown RBP2.82□□□□□ -1.96
NUP54-210ENST00000510884 H0YGG7 62 aa2.81□□□□□ -1.96
NUP54-210ENST00000510884 TENM2Q9NT68 2774 aa2.81□□□□□ -1.96
NUP54-210ENST00000510884 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
NUP54-210ENST00000510884 IGKV2-24A0A0C4DH68 120 aa2.79□□□□□ -1.96
NUP54-210ENST00000510884 STATHP02808 62 aa2.79□□□□□ -1.96
NUP54-210ENST00000510884 DEFB131AP59861 70 aa2.79□□□□□ -1.96
NUP54-210ENST00000510884 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
NUP54-210ENST00000510884 HERC1Q15751 4861 aa2.78□□□□□ -1.96
NUP54-210ENST00000510884 COX6A2Q02221 97 aa2.78□□□□□ -1.96
NUP54-210ENST00000510884 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
NUP54-210ENST00000510884 WFDC13Q8IUB5 93 aa2.78□□□□□ -1.96
NUP54-210ENST00000510884 R4GN34 69 aa2.78□□□□□ -1.96
NUP54-210ENST00000510884 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
NUP54-210ENST00000510884 TOMM7Q9P0U1 55 aa2.77□□□□□ -1.97
NUP54-210ENST00000510884 ABCA4P78363 2273 aa2.76□□□□□ -1.97
NUP54-210ENST00000510884 CADP27708 2225 aa2.76□□□□□ -1.97
NUP54-210ENST00000510884 INE1O15225 51 aa2.76□□□□□ -1.97
NUP54-210ENST00000510884 PCOTHQ58A44 107 aa2.76□□□□□ -1.97
NUP54-210ENST00000510884 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
NUP54-210ENST00000510884 KLK9Q2XQG4 91 aa2.75□□□□□ -1.97
NUP54-210ENST00000510884 DEFB133Q30KQ1 61 aa2.75□□□□□ -1.97
NUP54-210ENST00000510884 PRR9Q5T870 116 aa2.75□□□□□ -1.97
NUP54-210ENST00000510884 Q6ZRX8 168 aa2.74□□□□□ -1.97
NUP54-210ENST00000510884 CRIPTQ9P021 101 aa2.74□□□□□ -1.97
NUP54-210ENST00000510884 U3KQA8 63 aa2.73□□□□□ -1.97
NUP54-210ENST00000510884 G3V318 75 aa2.72□□□□□ -1.97
NUP54-210ENST00000510884 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
NUP54-210ENST00000510884 MRPL34Q9BQ48 92 aaKnown RBP2.72□□□□□ -1.97
NUP54-210ENST00000510884 KAAG1Q9UBP8 84 aa2.72□□□□□ -1.97
NUP54-210ENST00000510884 GVQW2A0A096LPI5 108 aaPredicted RBP2.71□□□□□ -1.98
NUP54-210ENST00000510884 TPRXLQ17RH7 258 aa2.7□□□□□ -1.98
NUP54-210ENST00000510884 C10orf99Q6UWK7 81 aa2.7□□□□□ -1.98
NUP54-210ENST00000510884 SPACA4Q8TDM5 124 aa2.7□□□□□ -1.98
NUP54-210ENST00000510884 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
NUP54-210ENST00000510884 MUC2Q02817 5179 aa2.69□□□□□ -1.98
NUP54-210ENST00000510884 USMG5Q96IX5 58 aa2.69□□□□□ -1.98
NUP54-210ENST00000510884 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
NUP54-210ENST00000510884 DNAH1Q9P2D7 4330 aa2.67□□□□□ -1.98
NUP54-210ENST00000510884 PKDREJQ9NTG1 2253 aa2.67□□□□□ -1.98
NUP54-210ENST00000510884 RP1P56715 2156 aa2.67□□□□□ -1.98
NUP54-210ENST00000510884 DEFB104AQ8WTQ1 72 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms