RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 M0R2T5 61 aa7.68□□□□□ -1.18
LIN54-210ENST00000510877 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
LIN54-210ENST00000510877 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.19
LIN54-210ENST00000510877 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
LIN54-210ENST00000510877 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
LIN54-210ENST00000510877 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
LIN54-210ENST00000510877 MRPL34Q9BQ48 92 aaKnown RBP7.63□□□□□ -1.19
LIN54-210ENST00000510877 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
LIN54-210ENST00000510877 Q6ZSA8 131 aa7.62□□□□□ -1.19
LIN54-210ENST00000510877 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
LIN54-210ENST00000510877 Q5VV11 94 aa7.6□□□□□ -1.19
LIN54-210ENST00000510877 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
LIN54-210ENST00000510877 Q96NJ1 140 aa7.6□□□□□ -1.19
LIN54-210ENST00000510877 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
LIN54-210ENST00000510877 Q8N377 158 aa7.57□□□□□ -1.2
LIN54-210ENST00000510877 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
LIN54-210ENST00000510877 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
LIN54-210ENST00000510877 LINC00313P59037 77 aa7.55□□□□□ -1.2
LIN54-210ENST00000510877 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
LIN54-210ENST00000510877 C8orf17Q9NRJ1 99 aa7.55□□□□□ -1.2
LIN54-210ENST00000510877 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
LIN54-210ENST00000510877 IGFL1Q6UW32 110 aa7.53□□□□□ -1.2
LIN54-210ENST00000510877 A0A1W2PNM2 257 aa7.52□□□□□ -1.21
LIN54-210ENST00000510877 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
LIN54-210ENST00000510877 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
LIN54-210ENST00000510877 ZNF469Q96JG9 3925 aaPredicted RBP7.49□□□□□ -1.21
LIN54-210ENST00000510877 A0A1B0GVX0 72 aa7.48□□□□□ -1.21
LIN54-210ENST00000510877 DSCR10P59022 87 aa7.45□□□□□ -1.22
LIN54-210ENST00000510877 FAM104AQ969W3 186 aa7.43□□□□□ -1.22
LIN54-210ENST00000510877 DMAC1Q96GE9 116 aa7.43□□□□□ -1.22
LIN54-210ENST00000510877 CSAG1Q6PB30 78 aa7.4□□□□□ -1.22
LIN54-210ENST00000510877 A0A087X002 238 aa7.4□□□□□ -1.22
LIN54-210ENST00000510877 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
LIN54-210ENST00000510877 A0A0G2JQZ4 141 aa7.37□□□□□ -1.23
LIN54-210ENST00000510877 SPINK7P58062 85 aa7.36□□□□□ -1.23
LIN54-210ENST00000510877 A6NN06 94 aa7.34□□□□□ -1.23
LIN54-210ENST00000510877 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
LIN54-210ENST00000510877 SPRR1AP35321 89 aa7.33□□□□□ -1.24
LIN54-210ENST00000510877 CUBNO60494 3623 aa7.32□□□□□ -1.24
LIN54-210ENST00000510877 HRES1P13985 223 aa7.3□□□□□ -1.24
LIN54-210ENST00000510877 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
LIN54-210ENST00000510877 KRTAP11-1Q8IUC1 163 aa7.28□□□□□ -1.24
LIN54-210ENST00000510877 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
LIN54-210ENST00000510877 A0A1B0GU33 70 aa7.26□□□□□ -1.25
LIN54-210ENST00000510877 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
LIN54-210ENST00000510877 Q8NDZ9 215 aa7.23□□□□□ -1.25
LIN54-210ENST00000510877 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
LIN54-210ENST00000510877 SPRR1BP22528 89 aa7.22□□□□□ -1.25
LIN54-210ENST00000510877 VPS13CQ709C8 3753 aa7.2□□□□□ -1.26
LIN54-210ENST00000510877 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
LIN54-210ENST00000510877 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
LIN54-210ENST00000510877 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
LIN54-210ENST00000510877 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
LIN54-210ENST00000510877 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
LIN54-210ENST00000510877 KRTAP10-8P60410 259 aa7.16□□□□□ -1.26
LIN54-210ENST00000510877 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
LIN54-210ENST00000510877 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
LIN54-210ENST00000510877 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
LIN54-210ENST00000510877 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
LIN54-210ENST00000510877 A0A0D9SG42 100 aa7.08□□□□□ -1.28
LIN54-210ENST00000510877 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
LIN54-210ENST00000510877 ROMO1P60602 79 aa7.08□□□□□ -1.28
LIN54-210ENST00000510877 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
LIN54-210ENST00000510877 DNAH9Q9NYC9 4486 aa7.04□□□□□ -1.28
LIN54-210ENST00000510877 HUWE1Q7Z6Z7 4374 aaKnown RBP7.03□□□□□ -1.28
LIN54-210ENST00000510877 Q5W150 140 aa7□□□□□ -1.29
LIN54-210ENST00000510877 PRKDCP78527 4128 aaKnown RBP7□□□□□ -1.29
LIN54-210ENST00000510877 ANK2Q01484 3957 aa7□□□□□ -1.29
LIN54-210ENST00000510877 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
LIN54-210ENST00000510877 A8MU10 97 aa6.97□□□□□ -1.29
LIN54-210ENST00000510877 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
LIN54-210ENST00000510877 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
LIN54-210ENST00000510877 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
LIN54-210ENST00000510877 XP32Q5T750 250 aa6.91□□□□□ -1.3
LIN54-210ENST00000510877 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
LIN54-210ENST00000510877 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
LIN54-210ENST00000510877 BIRC6Q9NR09 4857 aa6.87□□□□□ -1.31
LIN54-210ENST00000510877 C20orf166-AS1Q96NR2 134 aa6.87□□□□□ -1.31
LIN54-210ENST00000510877 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
LIN54-210ENST00000510877 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
LIN54-210ENST00000510877 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
LIN54-210ENST00000510877 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
LIN54-210ENST00000510877 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
LIN54-210ENST00000510877 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
LIN54-210ENST00000510877 DNAH11Q96DT5 4516 aa6.75□□□□□ -1.33
LIN54-210ENST00000510877 RYR3Q15413 4870 aa6.75□□□□□ -1.33
LIN54-210ENST00000510877 S4R3F8 94 aa6.74□□□□□ -1.33
LIN54-210ENST00000510877 A8MUU9 505 aa6.74□□□□□ -1.33
LIN54-210ENST00000510877 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
LIN54-210ENST00000510877 RYR1P21817 5038 aa6.68□□□□□ -1.34
LIN54-210ENST00000510877 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
LIN54-210ENST00000510877 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
LIN54-210ENST00000510877 STARD9Q9P2P6 4700 aa6.64□□□□□ -1.35
LIN54-210ENST00000510877 RYR2Q92736 4967 aa6.63□□□□□ -1.35
LIN54-210ENST00000510877 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
LIN54-210ENST00000510877 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
LIN54-210ENST00000510877 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.36
LIN54-210ENST00000510877 R4GN34 69 aa6.58□□□□□ -1.36
LIN54-210ENST00000510877 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
LIN54-210ENST00000510877 HERC2O95714 4834 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms