RNA–Protein interactions for RNA: ENST00000509691.1

SEC31A-229, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-229ENST00000509691 CELSR2Q9HCU4 2923 aa0.21□□□□□ -2.38
SEC31A-229ENST00000509691 CREBBPQ92793 2442 aa0.21□□□□□ -2.38
SEC31A-229ENST00000509691 AKAP6Q13023 2319 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 PDE4DIPQ5VU43 2346 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 MT1AP04731 61 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 HTN1P15515 57 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 DSPP15924 2871 aaKnown RBP0.2□□□□□ -2.38
SEC31A-229ENST00000509691 KNL1Q8NG31 2342 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 PKD1L2Q7Z442 2459 aa0.2□□□□□ -2.38
SEC31A-229ENST00000509691 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
SEC31A-229ENST00000509691 ATRQ13535 2644 aa0.19□□□□□ -2.38
SEC31A-229ENST00000509691 PTPN13Q12923 2485 aa0.19□□□□□ -2.38
SEC31A-229ENST00000509691 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
SEC31A-229ENST00000509691 TRANK1O15050 2925 aa0.19□□□□□ -2.38
SEC31A-229ENST00000509691 CHD6Q8TD26 2715 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
SEC31A-229ENST00000509691 SMR3BP02814 79 aaPredicted RBP0.18□□□□□ -2.38
SEC31A-229ENST00000509691 APELAP0DMC3 54 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 DEFB1P60022 68 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 DEFB136Q30KP8 78 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 DEFB124Q8NES8 71 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 UNC79Q9P2D8 2635 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 BPTFQ12830 3046 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 CEP290O15078 2479 aa0.18□□□□□ -2.38
SEC31A-229ENST00000509691 CHD9Q3L8U1 2897 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
SEC31A-229ENST00000509691 ZFYVE26Q68DK2 2539 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 VWFP04275 2813 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 SPRR2EP22531 72 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 DEFB133Q30KQ1 61 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 CSPG4Q6UVK1 2322 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 OTOGQ6ZRI0 2925 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 SPRR2FQ96RM1 72 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 CSMD3Q7Z407 3707 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 CACNA1AO00555 2505 aa0.17□□□□□ -2.38
SEC31A-229ENST00000509691 STAB1Q9NY15 2570 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 TNXBP22105 4242 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 KRTAP19-5Q3LI72 72 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
SEC31A-229ENST00000509691 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 CHD8Q9HCK8 2581 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 NCOR1O75376 2440 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 SPTA1P02549 2419 aa0.16□□□□□ -2.38
SEC31A-229ENST00000509691 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
SEC31A-229ENST00000509691 ACANP16112 2415 aa0.15□□□□□ -2.39
SEC31A-229ENST00000509691 CD52P31358 61 aa0.15□□□□□ -2.39
SEC31A-229ENST00000509691 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.39
SEC31A-229ENST00000509691 WNK1Q9H4A3 2382 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 UBR5O95071 2799 aaPredicted RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 MTORP42345 2549 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 FLNBO75369 2602 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 RPS29P62273 56 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 GCN1Q92616 2671 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 PRRC2CQ9Y520 2896 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 TNRC18O15417 2968 aaPredicted RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 SONP18583 2426 aaKnown RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
SEC31A-229ENST00000509691 COL6A5A8TX70 2615 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 MAST4O15021 2626 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 FLNCQ14315 2725 aa0.14□□□□□ -2.39
SEC31A-229ENST00000509691 REV3LO60673 3130 aa0.13□□□□□ -2.39
SEC31A-229ENST00000509691 ANKRD11Q6UB99 2663 aaPredicted RBP0.13□□□□□ -2.39
SEC31A-229ENST00000509691 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
SEC31A-229ENST00000509691 Q9Y3F1 56 aa0.13□□□□□ -2.39
SEC31A-229ENST00000509691 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
SEC31A-229ENST00000509691 SRRM2Q9UQ35 2752 aaKnown RBP0.12□□□□□ -2.39
SEC31A-229ENST00000509691 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
SEC31A-229ENST00000509691 A0A096LPF7 62 aa0.12□□□□□ -2.39
SEC31A-229ENST00000509691 MT1HP80294 61 aa0.12□□□□□ -2.39
SEC31A-229ENST00000509691 APC2O95996 2303 aa0.12□□□□□ -2.39
SEC31A-229ENST00000509691 UTP20O75691 2785 aaKnown RBP0.11□□□□□ -2.39
SEC31A-229ENST00000509691 ANKHD1Q8IWZ3 2542 aaKnown RBP0.11□□□□□ -2.39
SEC31A-229ENST00000509691 HRNRQ86YZ3 2850 aaPredicted RBP0.11□□□□□ -2.39
SEC31A-229ENST00000509691 DEFB4AO15263 64 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 STATHP02808 62 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 MT1EP04732 61 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 LINC01556Q5JQF7 62 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 DEFB108BQ8NET1 73 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 USP9YO00507 2555 aaPredicted RBP0.11□□□□□ -2.39
SEC31A-229ENST00000509691 ACACBO00763 2458 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 CUBNO60494 3623 aa0.11□□□□□ -2.39
SEC31A-229ENST00000509691 ACACAQ13085 2346 aa0.1□□□□□ -2.39
SEC31A-229ENST00000509691 PKD1L1Q8TDX9 2849 aa0.1□□□□□ -2.39
SEC31A-229ENST00000509691 TEP1Q99973 2627 aaKnown RBP0.1□□□□□ -2.39
SEC31A-229ENST00000509691 MT1LQ93083 61 aa0.1□□□□□ -2.39
SEC31A-229ENST00000509691 FASNP49327 2511 aaKnown RBP0.1□□□□□ -2.39
SEC31A-229ENST00000509691 ITPR3Q14573 2671 aa0.1□□□□□ -2.39
SEC31A-229ENST00000509691 NF1P21359 2839 aa0.09□□□□□ -2.39
SEC31A-229ENST00000509691 EPG5Q9HCE0 2579 aa0.09□□□□□ -2.39
SEC31A-229ENST00000509691 CCDC168Q8NDH2 2452 aa0.09□□□□□ -2.39
SEC31A-229ENST00000509691 MGAM2Q2M2H8 2515 aa0.09□□□□□ -2.39
SEC31A-229ENST00000509691 FAM186AA6NE01 2351 aa0.09□□□□□ -2.4
SEC31A-229ENST00000509691 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
SEC31A-229ENST00000509691 RIF1Q5UIP0 2472 aaKnown RBP0.08□□□□□ -2.4
SEC31A-229ENST00000509691 PDZD2O15018 2839 aa0.08□□□□□ -2.4
SEC31A-229ENST00000509691 LRRK2Q5S007 2527 aa0.08□□□□□ -2.4
SEC31A-229ENST00000509691 LAMA5O15230 3695 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms